RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 FIBPO43427 364 aa25.83■■□□□ 1.72
SH2D3A-201ENST00000245908 MCM5P33992 734 aa25.83■■□□□ 1.72
SH2D3A-201ENST00000245908 ANKRD1Q15327 319 aa25.83■■□□□ 1.72
SH2D3A-201ENST00000245908 BLOC1S2Q6QNY1 142 aa25.83■■□□□ 1.72
SH2D3A-201ENST00000245908 DBNLQ9UJU6 430 aaKnown RBP25.83■■□□□ 1.72
SH2D3A-201ENST00000245908 UVSSAQ2YD98 709 aa25.82■■□□□ 1.72
SH2D3A-201ENST00000245908 ZNF589Q86UQ0 364 aaPredicted RBP25.82■■□□□ 1.72
SH2D3A-201ENST00000245908 NECAB1Q8N987 351 aa25.82■■□□□ 1.72
SH2D3A-201ENST00000245908 STRCP1A6NGW2 1772 aa25.82■■□□□ 1.72
SH2D3A-201ENST00000245908 RPS6KB1P23443 525 aa25.81■■□□□ 1.72
SH2D3A-201ENST00000245908 PIP4K2AP48426 406 aaPredicted RBP25.81■■□□□ 1.72
SH2D3A-201ENST00000245908 DNM1Q05193 864 aaKnown RBP25.81■■□□□ 1.72
SH2D3A-201ENST00000245908 TFCP2Q12800 502 aa25.81■■□□□ 1.72
SH2D3A-201ENST00000245908 UBE3BQ7Z3V4 1068 aa25.81■■□□□ 1.72
SH2D3A-201ENST00000245908 COL9A3Q14050 684 aaPredicted RBP25.8■■□□□ 1.72
SH2D3A-201ENST00000245908 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.8■■□□□ 1.72
SH2D3A-201ENST00000245908 CABLES1Q8TDN4 633 aa25.8■■□□□ 1.72
SH2D3A-201ENST00000245908 JARID2Q92833 1246 aaPredicted RBP25.8■■□□□ 1.72
SH2D3A-201ENST00000245908 TAF5LO75529 589 aa25.8■■□□□ 1.72
SH2D3A-201ENST00000245908 TERF1P54274 439 aa25.8■■□□□ 1.72
SH2D3A-201ENST00000245908 CHRNA2Q15822 529 aa25.8■■□□□ 1.72
SH2D3A-201ENST00000245908 USPL1Q5W0Q7 1092 aa25.8■■□□□ 1.72
SH2D3A-201ENST00000245908 CASP7P55210 303 aa25.79■■□□□ 1.72
SH2D3A-201ENST00000245908 PLBD2Q8NHP8 589 aa25.79■■□□□ 1.72
SH2D3A-201ENST00000245908 EDC3Q96F86 508 aaKnown RBP25.79■■□□□ 1.72
SH2D3A-201ENST00000245908 CPDO75976 1380 aa25.79■■□□□ 1.72
SH2D3A-201ENST00000245908 VPS37CA5D8V6 355 aaPredicted RBP25.79■■□□□ 1.72
SH2D3A-201ENST00000245908 CABP4P57796 275 aa25.79■■□□□ 1.72
SH2D3A-201ENST00000245908 TAF6LQ9Y6J9 622 aa25.79■■□□□ 1.72
SH2D3A-201ENST00000245908 A0A087WZG4 1122 aa25.77■■□□□ 1.72
SH2D3A-201ENST00000245908 TOB2Q14106 344 aaPredicted RBP25.77■■□□□ 1.72
SH2D3A-201ENST00000245908 DTNBO60941 627 aa25.77■■□□□ 1.72
SH2D3A-201ENST00000245908 LARP1BQ659C4 914 aaKnown RBP25.77■■□□□ 1.72
SH2D3A-201ENST00000245908 ATP5J2-PTCD1G3V325 749 aa25.76■■□□□ 1.71
SH2D3A-201ENST00000245908 PTCD1O75127 700 aaKnown RBP25.76■■□□□ 1.71
SH2D3A-201ENST00000245908 PDCP20941 246 aa25.76■■□□□ 1.71
SH2D3A-201ENST00000245908 KRT32Q14532 448 aa25.75■■□□□ 1.71
SH2D3A-201ENST00000245908 ZNF609O15014 1411 aa25.75■■□□□ 1.71
SH2D3A-201ENST00000245908 TCEANC2Q96MN5 208 aa25.75■■□□□ 1.71
SH2D3A-201ENST00000245908 HAUS7Q99871 368 aa25.75■■□□□ 1.71
SH2D3A-201ENST00000245908 SPATA31A3Q5VYP0 1347 aa25.75■■□□□ 1.71
SH2D3A-201ENST00000245908 NUP188Q5SRE5 1749 aa25.74■■□□□ 1.71
SH2D3A-201ENST00000245908 DBNDD2Q9BQY9 259 aa25.74■■□□□ 1.71
SH2D3A-201ENST00000245908 FUCA2Q9BTY2 467 aa25.74■■□□□ 1.71
SH2D3A-201ENST00000245908 UBR2Q8IWV8 1755 aa25.73■■□□□ 1.71
SH2D3A-201ENST00000245908 CDC37L1Q7L3B6 337 aa25.73■■□□□ 1.71
SH2D3A-201ENST00000245908 CADPS2Q86UW7 1296 aa25.73■■□□□ 1.71
SH2D3A-201ENST00000245908 H7C1W4 665 aa25.72■■□□□ 1.71
SH2D3A-201ENST00000245908 KRT85P78386 507 aa25.72■■□□□ 1.71
SH2D3A-201ENST00000245908 U3KPZ7 1027 aaPredicted RBP25.72■■□□□ 1.71
SH2D3A-201ENST00000245908 TJP1Q07157 1748 aa25.72■■□□□ 1.71
SH2D3A-201ENST00000245908 ELP1O95163 1332 aa25.71■■□□□ 1.71
SH2D3A-201ENST00000245908 FOXO4P98177 505 aa25.71■■□□□ 1.71
SH2D3A-201ENST00000245908 TPRNQ4KMQ1 711 aa25.71■■□□□ 1.71
SH2D3A-201ENST00000245908 LMBR1LQ6UX01 489 aa25.71■■□□□ 1.71
SH2D3A-201ENST00000245908 NBPF26B4DH59 902 aa25.71■■□□□ 1.71
SH2D3A-201ENST00000245908 HCLS1P14317 486 aaPredicted RBP25.71■■□□□ 1.71
SH2D3A-201ENST00000245908 NBPF14Q5TI25 921 aa25.71■■□□□ 1.71
SH2D3A-201ENST00000245908 NBPF10Q6P3W6 841 aaKnown RBP25.71■■□□□ 1.71
SH2D3A-201ENST00000245908 NBPF15Q8N660 670 aa25.71■■□□□ 1.71
SH2D3A-201ENST00000245908 DNAJC2Q99543 621 aaKnown RBP25.71■■□□□ 1.71
SH2D3A-201ENST00000245908 MCMDC2Q4G0Z9 681 aa25.7■■□□□ 1.7
SH2D3A-201ENST00000245908 NDUFB9Q9Y6M9 179 aa25.7■■□□□ 1.7
SH2D3A-201ENST00000245908 PTMAP06454 111 aaKnown RBP25.7■■□□□ 1.7
SH2D3A-201ENST00000245908 TTC6Q86TZ1 520 aa25.69■■□□□ 1.7
SH2D3A-201ENST00000245908 NEK1Q96PY6 1258 aa25.69■■□□□ 1.7
SH2D3A-201ENST00000245908 MAP7D2Q96T17 732 aa25.68■■□□□ 1.7
SH2D3A-201ENST00000245908 USP25Q9UHP3 1055 aa25.68■■□□□ 1.7
SH2D3A-201ENST00000245908 PAPPAQ13219 1627 aa25.68■■□□□ 1.7
SH2D3A-201ENST00000245908 PALLDQ8WX93 1383 aa25.68■■□□□ 1.7
SH2D3A-201ENST00000245908 SH3TC1Q8TE82 1336 aa25.68■■□□□ 1.7
SH2D3A-201ENST00000245908 GIMAP6Q6P9H5 292 aa25.68■■□□□ 1.7
SH2D3A-201ENST00000245908 KBTBD3Q8NAB2 608 aa25.68■■□□□ 1.7
SH2D3A-201ENST00000245908 CCDC129Q6ZRS4 1044 aa25.67■■□□□ 1.7
SH2D3A-201ENST00000245908 GPR108Q9NPR9 543 aa25.67■■□□□ 1.7
SH2D3A-201ENST00000245908 PCDH11XQ9BZA7 1347 aa25.67■■□□□ 1.7
SH2D3A-201ENST00000245908 PCDH11YQ9BZA8 1340 aa25.67■■□□□ 1.7
SH2D3A-201ENST00000245908 ATG9AQ7Z3C6 839 aa25.67■■□□□ 1.7
SH2D3A-201ENST00000245908 FERMT3Q86UX7 667 aa25.67■■□□□ 1.7
SH2D3A-201ENST00000245908 GTF3C6Q969F1 213 aa25.67■■□□□ 1.7
SH2D3A-201ENST00000245908 SEC62Q99442 399 aaKnown RBP25.67■■□□□ 1.7
SH2D3A-201ENST00000245908 CWC25Q9NXE8 425 aaPredicted RBP25.67■■□□□ 1.7
SH2D3A-201ENST00000245908 KCPQ6ZWJ8 1503 aa25.66■■□□□ 1.7
SH2D3A-201ENST00000245908 CHGBP05060 677 aa25.66■■□□□ 1.7
SH2D3A-201ENST00000245908 DDX46Q7L014 1031 aaKnown RBP25.66■■□□□ 1.7
SH2D3A-201ENST00000245908 STK3Q13188 491 aa25.66■■□□□ 1.7
SH2D3A-201ENST00000245908 TICAM2Q86XR7 235 aa25.66■■□□□ 1.7
SH2D3A-201ENST00000245908 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.66■■□□□ 1.7
SH2D3A-201ENST00000245908 CYP21A2P08686 494 aa25.65■■□□□ 1.7
SH2D3A-201ENST00000245908 TTLL7Q6ZT98 887 aa25.65■■□□□ 1.7
SH2D3A-201ENST00000245908 ADCY5O95622 1261 aa25.65■■□□□ 1.7
SH2D3A-201ENST00000245908 CHMP3Q9Y3E7 222 aa25.65■■□□□ 1.7
SH2D3A-201ENST00000245908 WDR17Q8IZU2 1322 aa25.64■■□□□ 1.7
SH2D3A-201ENST00000245908 LAMA4Q16363 1823 aa25.64■■□□□ 1.7
SH2D3A-201ENST00000245908 ERVV-2B6SEH9 535 aa25.64■■□□□ 1.7
SH2D3A-201ENST00000245908 ZCRB1Q8TBF4 217 aaKnown RBP25.64■■□□□ 1.7
SH2D3A-201ENST00000245908 SCAND2PQ9GZW5 306 aaPredicted RBP25.64■■□□□ 1.7
SH2D3A-201ENST00000245908 KDM4AO75164 1064 aa25.63■■□□□ 1.69
SH2D3A-201ENST00000245908 FAM173BQ6P4H8 233 aa25.63■■□□□ 1.69
SH2D3A-201ENST00000245908 Q6ZUG5 572 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms