RNA–Protein interactions for RNA: ENST00000244227.7

SNRNP27-201, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP27, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-201ENST00000244227 CTSWP56202 376 aa16.75■□□□□ 0.27
SNRNP27-201ENST00000244227 HSCBQ8IWL3 235 aa16.75■□□□□ 0.27
SNRNP27-201ENST00000244227 CNTNAP4Q9C0A0 1308 aa16.75■□□□□ 0.27
SNRNP27-201ENST00000244227 EPB41L2O43491 1005 aaKnown RBP16.74■□□□□ 0.27
SNRNP27-201ENST00000244227 RABEP1Q15276 862 aa16.74■□□□□ 0.27
SNRNP27-201ENST00000244227 GREM2Q9H772 168 aa16.74■□□□□ 0.27
SNRNP27-201ENST00000244227 QTRT2Q9H974 415 aaKnown RBP16.74■□□□□ 0.27
SNRNP27-201ENST00000244227 PDE8AO60658 829 aa16.73■□□□□ 0.27
SNRNP27-201ENST00000244227 IFIT5Q13325 482 aaKnown RBP16.73■□□□□ 0.27
SNRNP27-201ENST00000244227 RC3H1Q5TC82 1133 aaKnown RBP16.73■□□□□ 0.27
SNRNP27-201ENST00000244227 ANO2Q9NQ90 1003 aa16.73■□□□□ 0.27
SNRNP27-201ENST00000244227 TIMM10P62072 90 aa16.73■□□□□ 0.27
SNRNP27-201ENST00000244227 CWC27Q6UX04 472 aaKnown RBP16.73■□□□□ 0.27
SNRNP27-201ENST00000244227 ZNF609O15014 1411 aa16.72■□□□□ 0.27
SNRNP27-201ENST00000244227 ITGA6P23229 1130 aa16.72■□□□□ 0.27
SNRNP27-201ENST00000244227 PARP10Q53GL7 1025 aa16.72■□□□□ 0.27
SNRNP27-201ENST00000244227 IL17RAQ96F46 866 aa16.72■□□□□ 0.27
SNRNP27-201ENST00000244227 LSG1Q9H089 658 aaKnown RBP16.72■□□□□ 0.27
SNRNP27-201ENST00000244227 SH3TC1Q8TE82 1336 aa16.71■□□□□ 0.27
SNRNP27-201ENST00000244227 CLEC4GQ6UXB4 293 aa16.71■□□□□ 0.27
SNRNP27-201ENST00000244227 EDC3Q96F86 508 aaKnown RBP16.71■□□□□ 0.27
SNRNP27-201ENST00000244227 AK7Q96M32 723 aa16.71■□□□□ 0.27
SNRNP27-201ENST00000244227 UTP14AQ9BVJ6 771 aaKnown RBP16.71■□□□□ 0.27
SNRNP27-201ENST00000244227 SLKQ9H2G2 1235 aaPredicted RBP16.71■□□□□ 0.27
SNRNP27-201ENST00000244227 PALD1Q9ULE6 856 aa16.71■□□□□ 0.27
SNRNP27-201ENST00000244227 RIPOR2Q9Y4F9 1068 aa16.71■□□□□ 0.27
SNRNP27-201ENST00000244227 SBF2Q86WG5 1849 aa16.71■□□□□ 0.27
SNRNP27-201ENST00000244227 BCORQ6W2J9 1755 aa16.71■□□□□ 0.26
SNRNP27-201ENST00000244227 A0A1B0GUL7 405 aa16.7■□□□□ 0.26
SNRNP27-201ENST00000244227 NTSR2O95665 410 aa16.7■□□□□ 0.26
SNRNP27-201ENST00000244227 SMIM5Q71RC9 77 aa16.7■□□□□ 0.26
SNRNP27-201ENST00000244227 NEUROD6Q96NK8 337 aa16.7■□□□□ 0.26
SNRNP27-201ENST00000244227 HAUS7Q99871 368 aa16.7■□□□□ 0.26
SNRNP27-201ENST00000244227 DIAPH3Q9NSV4 1193 aa16.7■□□□□ 0.26
SNRNP27-201ENST00000244227 CEP126Q9P2H0 1117 aa16.7■□□□□ 0.26
SNRNP27-201ENST00000244227 NIP7Q9Y221 180 aaKnown RBP eCLIP16.7■□□□□ 0.26
SNRNP27-201ENST00000244227 ANKRD18BA2A2Z9 1011 aa16.7■□□□□ 0.26
SNRNP27-201ENST00000244227 SPRYD3Q8NCJ5 442 aa16.7■□□□□ 0.26
SNRNP27-201ENST00000244227 CCNL1Q9UK58 526 aaPredicted RBP16.7■□□□□ 0.26
SNRNP27-201ENST00000244227 FAM177BA6PVY3 158 aa16.69■□□□□ 0.26
SNRNP27-201ENST00000244227 RPS6KA4O75676 772 aa16.69■□□□□ 0.26
SNRNP27-201ENST00000244227 HCLS1P14317 486 aaPredicted RBP16.69■□□□□ 0.26
SNRNP27-201ENST00000244227 HSPA4P34932 840 aa16.69■□□□□ 0.26
SNRNP27-201ENST00000244227 ANAPC15P60006 121 aa16.69■□□□□ 0.26
SNRNP27-201ENST00000244227 TAF7LQ5H9L4 462 aa16.69■□□□□ 0.26
SNRNP27-201ENST00000244227 BCL2L12Q9HB09 334 aa16.69■□□□□ 0.26
SNRNP27-201ENST00000244227 SNRKQ9NRH2 765 aa16.69■□□□□ 0.26
SNRNP27-201ENST00000244227 NDUFB9Q9Y6M9 179 aa16.69■□□□□ 0.26
SNRNP27-201ENST00000244227 RIC1Q4ADV7 1423 aa16.69■□□□□ 0.26
SNRNP27-201ENST00000244227 MYH3P11055 1940 aa16.69■□□□□ 0.26
SNRNP27-201ENST00000244227 RAD50Q92878 1312 aa16.69■□□□□ 0.26
SNRNP27-201ENST00000244227 LY75O60449 1722 aa16.68■□□□□ 0.26
SNRNP27-201ENST00000244227 K7ELQ4 463 aaPredicted RBP16.68■□□□□ 0.26
SNRNP27-201ENST00000244227 RGL2O15211 777 aa16.68■□□□□ 0.26
SNRNP27-201ENST00000244227 RUFY2Q8WXA3 655 aa16.68■□□□□ 0.26
SNRNP27-201ENST00000244227 FAM227BQ96M60 508 aa16.68■□□□□ 0.26
SNRNP27-201ENST00000244227 ZNF652Q9Y2D9 606 aa16.68■□□□□ 0.26
SNRNP27-201ENST00000244227 HIP1O00291 1037 aa16.68■□□□□ 0.26
SNRNP27-201ENST00000244227 MCCP23508 829 aa16.68■□□□□ 0.26
SNRNP27-201ENST00000244227 NMIQ13287 307 aaPredicted RBP16.68■□□□□ 0.26
SNRNP27-201ENST00000244227 NBR1Q14596 966 aa16.68■□□□□ 0.26
SNRNP27-201ENST00000244227 LDHAL6AQ6ZMR3 332 aa16.68■□□□□ 0.26
SNRNP27-201ENST00000244227 AMIGO3Q86WK7 504 aa16.68■□□□□ 0.26
SNRNP27-201ENST00000244227 FSD1Q9BTV5 496 aa16.68■□□□□ 0.26
SNRNP27-201ENST00000244227 BCL11BQ9C0K0 894 aaPredicted RBP16.68■□□□□ 0.26
SNRNP27-201ENST00000244227 DDIT3P35638 169 aa16.67■□□□□ 0.26
SNRNP27-201ENST00000244227 VGLL2Q8N8G2 317 aa16.67■□□□□ 0.26
SNRNP27-201ENST00000244227 AKAP2Q9Y2D5 859 aa16.67■□□□□ 0.26
SNRNP27-201ENST00000244227 A0A0D9SFI3 127 aa16.66■□□□□ 0.26
SNRNP27-201ENST00000244227 PTH1RQ03431 593 aa16.66■□□□□ 0.26
SNRNP27-201ENST00000244227 NARFQ9UHQ1 456 aa16.66■□□□□ 0.26
SNRNP27-201ENST00000244227 LRP5O75197 1615 aa16.66■□□□□ 0.26
SNRNP27-201ENST00000244227 DDX60Q8IY21 1712 aaKnown RBP16.66■□□□□ 0.26
SNRNP27-201ENST00000244227 ADORA1P30542 326 aa16.66■□□□□ 0.26
SNRNP27-201ENST00000244227 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.66■□□□□ 0.26
SNRNP27-201ENST00000244227 XAGE2Q96GT9 111 aa16.66■□□□□ 0.26
SNRNP27-201ENST00000244227 DNAJC2Q99543 621 aaKnown RBP16.66■□□□□ 0.26
SNRNP27-201ENST00000244227 RFX7Q2KHR2 1363 aa16.65■□□□□ 0.26
SNRNP27-201ENST00000244227 GNPATO15228 680 aa16.65■□□□□ 0.26
SNRNP27-201ENST00000244227 KIAA1211Q6ZU35 1233 aa16.65■□□□□ 0.26
SNRNP27-201ENST00000244227 SCN7AQ01118 1682 aa16.65■□□□□ 0.26
SNRNP27-201ENST00000244227 NFKBIBQ15653 356 aa16.64■□□□□ 0.25
SNRNP27-201ENST00000244227 METTL24Q5JXM2 366 aa16.64■□□□□ 0.25
SNRNP27-201ENST00000244227 USPL1Q5W0Q7 1092 aa16.64■□□□□ 0.25
SNRNP27-201ENST00000244227 TBC1D9BQ66K14 1250 aa16.64■□□□□ 0.25
SNRNP27-201ENST00000244227 SEC31BQ9NQW1 1179 aa16.64■□□□□ 0.25
SNRNP27-201ENST00000244227 CNNM1Q9NRU3 951 aa16.64■□□□□ 0.25
SNRNP27-201ENST00000244227 LRRC4BQ9NT99 713 aa16.64■□□□□ 0.25
SNRNP27-201ENST00000244227 SRP68Q9UHB9 627 aaKnown RBP16.64■□□□□ 0.25
SNRNP27-201ENST00000244227 TAF1LQ8IZX4 1826 aa16.64■□□□□ 0.25
SNRNP27-201ENST00000244227 RTL9Q8NET4 1388 aa16.64■□□□□ 0.25
SNRNP27-201ENST00000244227 MED23Q9ULK4 1368 aa16.64■□□□□ 0.25
SNRNP27-201ENST00000244227 CHGBP05060 677 aa16.63■□□□□ 0.25
SNRNP27-201ENST00000244227 DDX46Q7L014 1031 aaKnown RBP16.63■□□□□ 0.25
SNRNP27-201ENST00000244227 RASEFQ8IZ41 740 aa16.63■□□□□ 0.25
SNRNP27-201ENST00000244227 KBTBD3Q8NAB2 608 aa16.63■□□□□ 0.25
SNRNP27-201ENST00000244227 SNX14Q9Y5W7 946 aa16.63■□□□□ 0.25
SNRNP27-201ENST00000244227 CCDC171Q6TFL3 1326 aa16.63■□□□□ 0.25
SNRNP27-201ENST00000244227 ST18O60284 1047 aa16.63■□□□□ 0.25
SNRNP27-201ENST00000244227 IFIT1P09914 478 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms