RNA–Protein interactions for RNA: ENST00000243498.9

EXOSC9-201, Transcript of exosome component 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC9, Length 1,481 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-201ENST00000243498 CCDC191Q8NCU4 936 aa11.37□□□□□ -0.59
EXOSC9-201ENST00000243498 MEIS3Q99687 375 aa11.37□□□□□ -0.59
EXOSC9-201ENST00000243498 USP44Q9H0E7 712 aa11.37□□□□□ -0.59
EXOSC9-201ENST00000243498 PCDHB15Q9Y5E8 787 aa11.37□□□□□ -0.59
EXOSC9-201ENST00000243498 TAF1LQ8IZX4 1826 aa11.37□□□□□ -0.59
EXOSC9-201ENST00000243498 NEURL1BA8MQ27 555 aa11.36□□□□□ -0.59
EXOSC9-201ENST00000243498 GRM8O00222 908 aa11.36□□□□□ -0.59
EXOSC9-201ENST00000243498 RPS6KA4O75676 772 aa11.36□□□□□ -0.59
EXOSC9-201ENST00000243498 TRIM28Q13263 835 aaKnown RBP11.36□□□□□ -0.59
EXOSC9-201ENST00000243498 SF3B2Q13435 895 aaKnown RBP11.36□□□□□ -0.59
EXOSC9-201ENST00000243498 GCC1Q96CN9 775 aa11.36□□□□□ -0.59
EXOSC9-201ENST00000243498 ZBTB3Q9H5J0 574 aa11.36□□□□□ -0.59
EXOSC9-201ENST00000243498 CWC25Q9NXE8 425 aaPredicted RBP11.36□□□□□ -0.59
EXOSC9-201ENST00000243498 RTCBQ9Y3I0 505 aaKnown RBP11.36□□□□□ -0.59
EXOSC9-201ENST00000243498 NUP188Q5SRE5 1749 aa11.35□□□□□ -0.59
EXOSC9-201ENST00000243498 APBA3O96018 575 aa11.35□□□□□ -0.59
EXOSC9-201ENST00000243498 HSP90B1P14625 803 aaKnown RBP11.35□□□□□ -0.59
EXOSC9-201ENST00000243498 GCKRQ14397 625 aa11.35□□□□□ -0.59
EXOSC9-201ENST00000243498 ANKRD44Q8N8A2 993 aa11.35□□□□□ -0.59
EXOSC9-201ENST00000243498 LINC00116Q8NCU8 138 aa11.35□□□□□ -0.59
EXOSC9-201ENST00000243498 AK7Q96M32 723 aa11.35□□□□□ -0.59
EXOSC9-201ENST00000243498 UTYO14607 1347 aa11.35□□□□□ -0.59
EXOSC9-201ENST00000243498 MYH14Q7Z406 1995 aaKnown RBP11.34□□□□□ -0.59
EXOSC9-201ENST00000243498 NUP98P52948 1817 aa11.34□□□□□ -0.59
EXOSC9-201ENST00000243498 ATP8B2P98198 1209 aa11.34□□□□□ -0.59
EXOSC9-201ENST00000243498 CWF19L2Q2TBE0 894 aaKnown RBP11.34□□□□□ -0.59
EXOSC9-201ENST00000243498 CLEC4GQ6UXB4 293 aa11.34□□□□□ -0.59
EXOSC9-201ENST00000243498 PTF1AQ7RTS3 328 aa11.34□□□□□ -0.59
EXOSC9-201ENST00000243498 ANKRD36CQ5JPF3 1778 aa11.34□□□□□ -0.59
EXOSC9-201ENST00000243498 KDM2BQ8NHM5 1336 aa11.34□□□□□ -0.59
EXOSC9-201ENST00000243498 COL15A1P39059 1388 aa11.33□□□□□ -0.6
EXOSC9-201ENST00000243498 IGKV5-2P06315 115 aa11.33□□□□□ -0.6
EXOSC9-201ENST00000243498 TXNRD1Q16881 649 aa11.33□□□□□ -0.6
EXOSC9-201ENST00000243498 PARP10Q53GL7 1025 aa11.33□□□□□ -0.6
EXOSC9-201ENST00000243498 TRAPPC3LQ5T215 181 aa11.33□□□□□ -0.6
EXOSC9-201ENST00000243498 CEP85Q6P2H3 762 aa11.33□□□□□ -0.6
EXOSC9-201ENST00000243498 ISCA1Q9BUE6 129 aa11.33□□□□□ -0.6
EXOSC9-201ENST00000243498 C1orf115Q9H7X2 142 aa11.33□□□□□ -0.6
EXOSC9-201ENST00000243498 TBC1D2BQ9UPU7 963 aa11.33□□□□□ -0.6
EXOSC9-201ENST00000243498 LRRFIP2Q9Y608 721 aaKnown RBP11.33□□□□□ -0.6
EXOSC9-201ENST00000243498 RGPD3A6NKT7 1758 aaPredicted RBP11.33□□□□□ -0.6
EXOSC9-201ENST00000243498 RGPD4Q7Z3J3 1758 aa11.33□□□□□ -0.6
EXOSC9-201ENST00000243498 ATP5J2-PTCD1G3V325 749 aa11.32□□□□□ -0.6
EXOSC9-201ENST00000243498 GNPATO15228 680 aa11.32□□□□□ -0.6
EXOSC9-201ENST00000243498 ZPR1O75312 459 aa11.32□□□□□ -0.6
EXOSC9-201ENST00000243498 PPP1R37O75864 691 aa11.32□□□□□ -0.6
EXOSC9-201ENST00000243498 IGHDP01880 384 aa11.32□□□□□ -0.6
EXOSC9-201ENST00000243498 NBPF7P0C2Y1 421 aaPredicted RBP11.32□□□□□ -0.6
EXOSC9-201ENST00000243498 ZNF687Q8N1G0 1237 aa11.32□□□□□ -0.6
EXOSC9-201ENST00000243498 C4BP0C0L5 1744 aa11.32□□□□□ -0.6
EXOSC9-201ENST00000243498 HSP90AB4PQ58FF6 505 aa11.32□□□□□ -0.6
EXOSC9-201ENST00000243498 CCDC125Q86Z20 511 aa11.32□□□□□ -0.6
EXOSC9-201ENST00000243498 SMC5Q8IY18 1101 aa11.32□□□□□ -0.6
EXOSC9-201ENST00000243498 FLAD1Q8NFF5 587 aa11.32□□□□□ -0.6
EXOSC9-201ENST00000243498 NARFQ9UHQ1 456 aa11.32□□□□□ -0.6
EXOSC9-201ENST00000243498 H7C1W4 665 aa11.31□□□□□ -0.6
EXOSC9-201ENST00000243498 SLC34A2O95436 690 aa11.31□□□□□ -0.6
EXOSC9-201ENST00000243498 PCCAP05165 728 aaPredicted RBP11.31□□□□□ -0.6
EXOSC9-201ENST00000243498 RFC4P35249 363 aa11.31□□□□□ -0.6
EXOSC9-201ENST00000243498 BAG6P46379 1132 aa11.31□□□□□ -0.6
EXOSC9-201ENST00000243498 PPP1R42Q7Z4L9 355 aa11.31□□□□□ -0.6
EXOSC9-201ENST00000243498 DCTPP1Q9H773 170 aa11.31□□□□□ -0.6
EXOSC9-201ENST00000243498 CAMTA2O94983 1202 aa11.3□□□□□ -0.6
EXOSC9-201ENST00000243498 SSFA2P28290 1259 aa11.3□□□□□ -0.6
EXOSC9-201ENST00000243498 MTX1Q13505 466 aa11.3□□□□□ -0.6
EXOSC9-201ENST00000243498 HLFQ16534 295 aa11.3□□□□□ -0.6
EXOSC9-201ENST00000243498 UBE3BQ7Z3V4 1068 aa11.3□□□□□ -0.6
EXOSC9-201ENST00000243498 ZNF34Q8IZ26 560 aa11.3□□□□□ -0.6
EXOSC9-201ENST00000243498 ZBTB38Q8NAP3 1195 aaPredicted RBP11.3□□□□□ -0.6
EXOSC9-201ENST00000243498 BCORQ6W2J9 1755 aa11.29□□□□□ -0.6
EXOSC9-201ENST00000243498 TNS1Q9HBL0 1735 aaKnown RBP11.29□□□□□ -0.6
EXOSC9-201ENST00000243498 SRGAP3O43295 1099 aa11.29□□□□□ -0.6
EXOSC9-201ENST00000243498 KCNQ4P56696 695 aa11.29□□□□□ -0.6
EXOSC9-201ENST00000243498 NLRP10Q86W26 655 aa11.29□□□□□ -0.6
EXOSC9-201ENST00000243498 SSH3Q8TE77 659 aa11.29□□□□□ -0.6
EXOSC9-201ENST00000243498 RYDENQ9NUL5 291 aaKnown RBP11.29□□□□□ -0.6
EXOSC9-201ENST00000243498 CDHR2Q9BYE9 1310 aa11.29□□□□□ -0.6
EXOSC9-201ENST00000243498 RAB11FIP3O75154 756 aa11.28□□□□□ -0.6
EXOSC9-201ENST00000243498 ARHGEF1Q92888 912 aaKnown RBP11.28□□□□□ -0.6
EXOSC9-201ENST00000243498 KHSRPQ92945 711 aaKnown RBP eCLIP11.28□□□□□ -0.62e-7■■□□□ 13.1
EXOSC9-201ENST00000243498 SUCLG2Q96I99 432 aa11.28□□□□□ -0.6
EXOSC9-201ENST00000243498 UTP14AQ9BVJ6 771 aaKnown RBP11.28□□□□□ -0.6
EXOSC9-201ENST00000243498 LRRC4BQ9NT99 713 aa11.28□□□□□ -0.6
EXOSC9-201ENST00000243498 TRMT112Q9UI30 125 aaKnown RBP11.28□□□□□ -0.6
EXOSC9-201ENST00000243498 NIP7Q9Y221 180 aaKnown RBP eCLIP11.28□□□□□ -0.6
EXOSC9-201ENST00000243498 GPTP24298 496 aa11.27□□□□□ -0.6
EXOSC9-201ENST00000243498 ANKRD45Q5TZF3 282 aa11.27□□□□□ -0.6
EXOSC9-201ENST00000243498 ERC1Q8IUD2 1116 aa11.27□□□□□ -0.6
EXOSC9-201ENST00000243498 SIRT2Q8IXJ6 389 aa11.27□□□□□ -0.6
EXOSC9-201ENST00000243498 PLA2G12BQ9BX93 195 aa11.27□□□□□ -0.6
EXOSC9-201ENST00000243498 NYXQ9GZU5 481 aa11.27□□□□□ -0.6
EXOSC9-201ENST00000243498 PDZRN3Q9UPQ7 1066 aa11.27□□□□□ -0.6
EXOSC9-201ENST00000243498 SH3TC1Q8TE82 1336 aa11.27□□□□□ -0.61
EXOSC9-201ENST00000243498 UBR3Q6ZT12 1888 aa11.27□□□□□ -0.61
EXOSC9-201ENST00000243498 SCN7AQ01118 1682 aa11.26□□□□□ -0.61
EXOSC9-201ENST00000243498 SURF6O75683 361 aaKnown RBP11.26□□□□□ -0.61
EXOSC9-201ENST00000243498 GTF2E1P29083 439 aaPredicted RBP11.26□□□□□ -0.61
EXOSC9-201ENST00000243498 CASP7P55210 303 aa11.26□□□□□ -0.61
EXOSC9-201ENST00000243498 RABL6Q3YEC7 729 aaPredicted RBP11.26□□□□□ -0.61
EXOSC9-201ENST00000243498 USPL1Q5W0Q7 1092 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms