RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 CYB5RLQ6IPT4 315 aa7.69□□□□□ -1.18
CSMD2-201ENST00000241312 LRSAM1Q6UWE0 723 aa7.69□□□□□ -1.18
CSMD2-201ENST00000241312 CCDC94Q9BW85 323 aaPredicted RBP7.69□□□□□ -1.18
CSMD2-201ENST00000241312 IDEP14735 1019 aa7.69□□□□□ -1.18
CSMD2-201ENST00000241312 NLRP5P59047 1200 aa7.69□□□□□ -1.18
CSMD2-201ENST00000241312 TAF7Q15545 349 aaPredicted RBP7.69□□□□□ -1.18
CSMD2-201ENST00000241312 NAP1L3Q99457 506 aaPredicted RBP7.69□□□□□ -1.18
CSMD2-201ENST00000241312 NOL3O60936 208 aaKnown RBP7.69□□□□□ -1.18
CSMD2-201ENST00000241312 ZNF213O14771 459 aa7.69□□□□□ -1.18
CSMD2-201ENST00000241312 MCM10Q7L590 875 aa7.69□□□□□ -1.18
CSMD2-201ENST00000241312 CLCN1P35523 988 aa7.69□□□□□ -1.18
CSMD2-201ENST00000241312 STIM2Q9P246 746 aa7.69□□□□□ -1.18
CSMD2-201ENST00000241312 PPP1R1BQ9UD71 204 aaPredicted RBP7.69□□□□□ -1.18
CSMD2-201ENST00000241312 TSHZ3Q63HK5 1081 aa7.69□□□□□ -1.18
CSMD2-201ENST00000241312 WDR66Q8TBY9 1149 aa7.69□□□□□ -1.18
CSMD2-201ENST00000241312 ZSWIM4Q9H7M6 989 aa7.69□□□□□ -1.18
CSMD2-201ENST00000241312 ORC3Q9UBD5 711 aaPredicted RBP7.69□□□□□ -1.18
CSMD2-201ENST00000241312 WDHD1O75717 1129 aaPredicted RBP7.69□□□□□ -1.18
CSMD2-201ENST00000241312 MCM6Q14566 821 aa7.69□□□□□ -1.18
CSMD2-201ENST00000241312 LMBR1Q8WVP7 490 aa7.69□□□□□ -1.18
CSMD2-201ENST00000241312 DBF4Q9UBU7 674 aaPredicted RBP7.69□□□□□ -1.18
CSMD2-201ENST00000241312 MYO10Q9HD67 2058 aa7.69□□□□□ -1.18
CSMD2-201ENST00000241312 SYT1P21579 422 aa7.69□□□□□ -1.18
CSMD2-201ENST00000241312 UBASH3AP57075 661 aa7.69□□□□□ -1.18
CSMD2-201ENST00000241312 NCOA7Q8NI08 942 aa7.69□□□□□ -1.18
CSMD2-201ENST00000241312 CAPN2P17655 700 aa7.69□□□□□ -1.18
CSMD2-201ENST00000241312 TMEM67Q5HYA8 995 aa7.69□□□□□ -1.18
CSMD2-201ENST00000241312 RSRC1Q96IZ7 334 aaKnown RBP7.69□□□□□ -1.18
CSMD2-201ENST00000241312 MPHOSPH6Q99547 160 aaKnown RBP7.69□□□□□ -1.18
CSMD2-201ENST00000241312 IARSP41252 1262 aaKnown RBP7.69□□□□□ -1.18
CSMD2-201ENST00000241312 UBE2Q2Q8WVN8 375 aa7.69□□□□□ -1.18
CSMD2-201ENST00000241312 MRPS27Q92552 414 aaKnown RBP7.69□□□□□ -1.18
CSMD2-201ENST00000241312 TMOD3Q9NYL9 352 aa7.69□□□□□ -1.18
CSMD2-201ENST00000241312 SAMD15Q9P1V8 674 aa7.69□□□□□ -1.18
CSMD2-201ENST00000241312 CEP83Q9Y592 693 aa7.69□□□□□ -1.18
CSMD2-201ENST00000241312 ZBTB16Q05516 673 aa7.68□□□□□ -1.18
CSMD2-201ENST00000241312 ALDH3A1P30838 453 aa7.68□□□□□ -1.18
CSMD2-201ENST00000241312 AFAP1Q8N556 730 aa7.68□□□□□ -1.18
CSMD2-201ENST00000241312 DNMBPQ6XZF7 1577 aa7.68□□□□□ -1.18
CSMD2-201ENST00000241312 CCDC129Q6ZRS4 1044 aa7.68□□□□□ -1.18
CSMD2-201ENST00000241312 USP16Q9Y5T5 823 aa7.68□□□□□ -1.18
CSMD2-201ENST00000241312 NAIPQ13075 1403 aa7.68□□□□□ -1.18
CSMD2-201ENST00000241312 ISM2Q6H9L7 571 aa7.68□□□□□ -1.18
CSMD2-201ENST00000241312 TSGA10Q9BZW7 698 aa7.68□□□□□ -1.18
CSMD2-201ENST00000241312 NCOA1Q15788 1441 aa7.68□□□□□ -1.18
CSMD2-201ENST00000241312 KRT86O43790 486 aa7.68□□□□□ -1.18
CSMD2-201ENST00000241312 ZSCAN22P10073 491 aaPredicted RBP7.68□□□□□ -1.18
CSMD2-201ENST00000241312 PUF60Q9UHX1 559 aaKnown RBP7.68□□□□□ -1.18
CSMD2-201ENST00000241312 PSMA7O14818 248 aa7.68□□□□□ -1.18
CSMD2-201ENST00000241312 PRC1O43663 620 aa7.68□□□□□ -1.18
CSMD2-201ENST00000241312 CCT2P78371 535 aaKnown RBP7.68□□□□□ -1.18
CSMD2-201ENST00000241312 ZNF444Q8N0Y2 327 aaPredicted RBP7.68□□□□□ -1.18
CSMD2-201ENST00000241312 CCDC82Q8N4S0 544 aa7.68□□□□□ -1.18
CSMD2-201ENST00000241312 ZMYND15Q9H091 742 aa7.68□□□□□ -1.18
CSMD2-201ENST00000241312 BAG3O95817 575 aa7.68□□□□□ -1.18
CSMD2-201ENST00000241312 STAT6P42226 847 aa7.68□□□□□ -1.18
CSMD2-201ENST00000241312 CCDC61Q9Y6R9 512 aa7.68□□□□□ -1.18
CSMD2-201ENST00000241312 ATP2A2P16615 1042 aaKnown RBP7.68□□□□□ -1.18
CSMD2-201ENST00000241312 FMNL3Q8IVF7 1028 aa7.68□□□□□ -1.18
CSMD2-201ENST00000241312 SF3B2Q13435 895 aaKnown RBP7.68□□□□□ -1.18
CSMD2-201ENST00000241312 ATRIPQ8WXE1 791 aa7.68□□□□□ -1.18
CSMD2-201ENST00000241312 DRC1Q96MC2 740 aa7.68□□□□□ -1.18
CSMD2-201ENST00000241312 IFT140Q96RY7 1462 aa7.67□□□□□ -1.18
CSMD2-201ENST00000241312 RAB11FIP4Q86YS3 637 aa7.67□□□□□ -1.18
CSMD2-201ENST00000241312 RTL1A6NKG5 1358 aa7.67□□□□□ -1.18
CSMD2-201ENST00000241312 IL16Q14005 1332 aa7.67□□□□□ -1.18
CSMD2-201ENST00000241312 BICD1Q96G01 975 aa7.67□□□□□ -1.18
CSMD2-201ENST00000241312 KRT23Q9C075 422 aa7.67□□□□□ -1.18
CSMD2-201ENST00000241312 RRAGBQ5VZM2 374 aa7.67□□□□□ -1.18
CSMD2-201ENST00000241312 CEP57Q86XR8 500 aa7.67□□□□□ -1.18
CSMD2-201ENST00000241312 KIAA1524Q8TCG1 905 aa7.67□□□□□ -1.18
CSMD2-201ENST00000241312 SCAF11Q99590 1463 aaKnown RBP7.67□□□□□ -1.18
CSMD2-201ENST00000241312 BICDL2A1A5D9 508 aa7.67□□□□□ -1.18
CSMD2-201ENST00000241312 ATP2C2O75185 946 aa7.67□□□□□ -1.18
CSMD2-201ENST00000241312 SETDB1Q15047 1291 aa7.67□□□□□ -1.18
CSMD2-201ENST00000241312 TTC31Q49AM3 519 aaPredicted RBP7.67□□□□□ -1.18
CSMD2-201ENST00000241312 FAM76AQ8TAV0 307 aa7.67□□□□□ -1.18
CSMD2-201ENST00000241312 CCDC110Q8TBZ0 833 aa7.67□□□□□ -1.18
CSMD2-201ENST00000241312 MRC2Q9UBG0 1479 aa7.67□□□□□ -1.18
CSMD2-201ENST00000241312 KRT83P78385 493 aa7.67□□□□□ -1.18
CSMD2-201ENST00000241312 MAP3K9P80192 1104 aa7.67□□□□□ -1.18
CSMD2-201ENST00000241312 FLIIQ13045 1269 aa7.67□□□□□ -1.18
CSMD2-201ENST00000241312 KRT13P13646 458 aa7.67□□□□□ -1.18
CSMD2-201ENST00000241312 VAV2P52735 878 aa7.67□□□□□ -1.18
CSMD2-201ENST00000241312 NOLC1Q14978 699 aaKnown RBP eCLIP7.67□□□□□ -1.18
CSMD2-201ENST00000241312 ANO6Q4KMQ2 910 aa7.67□□□□□ -1.18
CSMD2-201ENST00000241312 CNNM2Q9H8M5 875 aa7.67□□□□□ -1.18
CSMD2-201ENST00000241312 CDK13Q14004 1512 aaKnown RBP7.67□□□□□ -1.18
CSMD2-201ENST00000241312 TFIP11Q9UBB9 837 aaKnown RBP7.67□□□□□ -1.18
CSMD2-201ENST00000241312 ASXL1Q8IXJ9 1541 aa7.67□□□□□ -1.18
CSMD2-201ENST00000241312 CCDC160A6NGH7 325 aa7.67□□□□□ -1.18
CSMD2-201ENST00000241312 RPGRQ92834 1020 aaKnown RBP7.67□□□□□ -1.18
CSMD2-201ENST00000241312 SAMM50Q9Y512 469 aa7.67□□□□□ -1.18
CSMD2-201ENST00000241312 DNAI1Q9UI46 699 aa7.67□□□□□ -1.18
CSMD2-201ENST00000241312 MAP1BP46821 2468 aaKnown RBP7.67□□□□□ -1.18
CSMD2-201ENST00000241312 ZWINTO95229 277 aa7.66□□□□□ -1.18
CSMD2-201ENST00000241312 BICDL1Q6ZP65 573 aa7.66□□□□□ -1.18
CSMD2-201ENST00000241312 RNF216Q9NWF9 866 aaPredicted RBP7.66□□□□□ -1.18
CSMD2-201ENST00000241312 CCDC14Q49A88 953 aa7.66□□□□□ -1.18
CSMD2-201ENST00000241312 PUS7Q96PZ0 661 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms