RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 ARL1P40616 181 aaPredicted RBP15.78■□□□□ 0.12
TARDBP-201ENST00000240185 KARSQ15046 597 aaKnown RBP15.78■□□□□ 0.12
TARDBP-201ENST00000240185 KCNK9Q9NPC2 374 aa15.78■□□□□ 0.12
TARDBP-201ENST00000240185 ZNF644Q9H582 1327 aaPredicted RBP15.78■□□□□ 0.12
TARDBP-201ENST00000240185 INPP5BP32019 993 aa15.78■□□□□ 0.12
TARDBP-201ENST00000240185 PRPHP41219 470 aa15.78■□□□□ 0.12
TARDBP-201ENST00000240185 ATP11AP98196 1134 aa15.78■□□□□ 0.12
TARDBP-201ENST00000240185 SF3B2Q13435 895 aaKnown RBP15.78■□□□□ 0.12
TARDBP-201ENST00000240185 CEP120Q8N960 986 aa15.78■□□□□ 0.12
TARDBP-201ENST00000240185 RNF41Q9H4P4 317 aaPredicted RBP15.78■□□□□ 0.12
TARDBP-201ENST00000240185 LZTFL1Q9NQ48 299 aa15.78■□□□□ 0.12
TARDBP-201ENST00000240185 FAM114A2Q9NRY5 505 aa15.78■□□□□ 0.12
TARDBP-201ENST00000240185 CACNA2D3Q8IZS8 1091 aa15.77■□□□□ 0.12
TARDBP-201ENST00000240185 NBPF8Q3BBV2 869 aa15.77■□□□□ 0.12
TARDBP-201ENST00000240185 STXBP4Q6ZWJ1 553 aa15.77■□□□□ 0.12
TARDBP-201ENST00000240185 CATIPQ7Z7H3 387 aa15.77■□□□□ 0.12
TARDBP-201ENST00000240185 IFT74Q96LB3 600 aa15.77■□□□□ 0.12
TARDBP-201ENST00000240185 EXOC1Q9NV70 894 aa15.77■□□□□ 0.12
TARDBP-201ENST00000240185 ANKRD50Q9ULJ7 1429 aa15.77■□□□□ 0.12
TARDBP-201ENST00000240185 NDUFAB1O14561 156 aa15.77■□□□□ 0.12
TARDBP-201ENST00000240185 INTS8Q75QN2 995 aaKnown RBP15.77■□□□□ 0.12
TARDBP-201ENST00000240185 SEC62Q99442 399 aaKnown RBP15.77■□□□□ 0.12
TARDBP-201ENST00000240185 LMOD1P29536 600 aaPredicted RBP15.77■□□□□ 0.11
TARDBP-201ENST00000240185 ALDH1L2Q3SY69 923 aa15.77■□□□□ 0.11
TARDBP-201ENST00000240185 ZNF569Q5MCW4 686 aa15.77■□□□□ 0.11
TARDBP-201ENST00000240185 DUSP27Q5VZP5 1158 aa15.77■□□□□ 0.11
TARDBP-201ENST00000240185 TBC1D5Q92609 795 aa15.77■□□□□ 0.11
TARDBP-201ENST00000240185 GUCA1BQ9UMX6 200 aa15.77■□□□□ 0.11
TARDBP-201ENST00000240185 DZIP1Q86YF9 867 aaKnown RBP15.76■□□□□ 0.11
TARDBP-201ENST00000240185 SYCP3Q8IZU3 236 aa15.76■□□□□ 0.11
TARDBP-201ENST00000240185 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.76■□□□□ 0.11
TARDBP-201ENST00000240185 AFMP43652 599 aa15.76■□□□□ 0.11
TARDBP-201ENST00000240185 POTEDQ86YR6 584 aa15.76■□□□□ 0.11
TARDBP-201ENST00000240185 CCDC144CPQ8IYA2 1237 aa15.76■□□□□ 0.11
TARDBP-201ENST00000240185 MRPS27Q92552 414 aaKnown RBP15.76■□□□□ 0.11
TARDBP-201ENST00000240185 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.76■□□□□ 0.11
TARDBP-201ENST00000240185 PEG3Q9GZU2 1588 aa15.76■□□□□ 0.11
TARDBP-201ENST00000240185 PPP2R3AQ06190 1150 aa15.76■□□□□ 0.11
TARDBP-201ENST00000240185 PRAM1Q96QH2 718 aa15.76■□□□□ 0.11
TARDBP-201ENST00000240185 BUB1BO60566 1050 aaPredicted RBP15.76■□□□□ 0.11
TARDBP-201ENST00000240185 AFAP1L1Q8TED9 768 aa15.76■□□□□ 0.11
TARDBP-201ENST00000240185 MMRN2Q9H8L6 949 aa15.76■□□□□ 0.11
TARDBP-201ENST00000240185 CABP1Q9NZU7 370 aa15.76■□□□□ 0.11
TARDBP-201ENST00000240185 CADPSQ9ULU8 1353 aa15.76■□□□□ 0.11
TARDBP-201ENST00000240185 MAP3K12Q12852 859 aa15.76■□□□□ 0.11
TARDBP-201ENST00000240185 MICU3Q86XE3 530 aa15.76■□□□□ 0.11
TARDBP-201ENST00000240185 TTC16Q8NEE8 873 aa15.76■□□□□ 0.11
TARDBP-201ENST00000240185 NEK1Q96PY6 1258 aa15.76■□□□□ 0.11
TARDBP-201ENST00000240185 DHX29Q7Z478 1369 aaKnown RBP15.75■□□□□ 0.11
TARDBP-201ENST00000240185 EVCP57679 992 aa15.75■□□□□ 0.11
TARDBP-201ENST00000240185 THUMPD2Q9BTF0 503 aaKnown RBP15.75■□□□□ 0.11
TARDBP-201ENST00000240185 SSX2IPQ9Y2D8 614 aa15.75■□□□□ 0.11
TARDBP-201ENST00000240185 KIF21BO75037 1637 aa15.75■□□□□ 0.11
TARDBP-201ENST00000240185 PPM1FP49593 454 aaPredicted RBP15.75■□□□□ 0.11
TARDBP-201ENST00000240185 ZNF444Q8N0Y2 327 aaPredicted RBP15.75■□□□□ 0.11
TARDBP-201ENST00000240185 KCNG4Q8TDN1 519 aa15.75■□□□□ 0.11
TARDBP-201ENST00000240185 EVI5LQ96CN4 794 aa15.75■□□□□ 0.11
TARDBP-201ENST00000240185 NEDD9Q14511 834 aa15.75■□□□□ 0.11
TARDBP-201ENST00000240185 CUL5Q93034 780 aa15.75■□□□□ 0.11
TARDBP-201ENST00000240185 ERO1AQ96HE7 468 aa15.75■□□□□ 0.11
TARDBP-201ENST00000240185 CCDC42Q96M95 316 aa15.75■□□□□ 0.11
TARDBP-201ENST00000240185 TRIM7Q9C029 511 aa15.75■□□□□ 0.11
TARDBP-201ENST00000240185 MKRN1Q9UHC7 482 aaKnown RBP15.75■□□□□ 0.11
TARDBP-201ENST00000240185 TTC21AQ8NDW8 1320 aa15.75■□□□□ 0.11
TARDBP-201ENST00000240185 NDC80O14777 642 aa15.75■□□□□ 0.11
TARDBP-201ENST00000240185 TYRO3Q06418 890 aa15.75■□□□□ 0.11
TARDBP-201ENST00000240185 GSTA5Q7RTV2 222 aa15.75■□□□□ 0.11
TARDBP-201ENST00000240185 LMBR1Q8WVP7 490 aa15.75■□□□□ 0.11
TARDBP-201ENST00000240185 LRRC27Q9C0I9 530 aa15.75■□□□□ 0.11
TARDBP-201ENST00000240185 VIMP08670 466 aaKnown RBP15.74■□□□□ 0.11
TARDBP-201ENST00000240185 RGS22Q8NE09 1264 aa15.74■□□□□ 0.11
TARDBP-201ENST00000240185 VCX3BQ9H321 246 aa15.74■□□□□ 0.11
TARDBP-201ENST00000240185 MIS18AQ9NYP9 233 aa15.74■□□□□ 0.11
TARDBP-201ENST00000240185 CIB2O75838 187 aa15.74■□□□□ 0.11
TARDBP-201ENST00000240185 ALDH3A1P30838 453 aa15.74■□□□□ 0.11
TARDBP-201ENST00000240185 METAP2P50579 478 aaKnown RBP eCLIP15.74■□□□□ 0.11
TARDBP-201ENST00000240185 GABPB1Q06547 395 aaPredicted RBP15.74■□□□□ 0.11
TARDBP-201ENST00000240185 GBP7Q8N8V2 638 aaPredicted RBP15.74■□□□□ 0.11
TARDBP-201ENST00000240185 NECAB1Q8N987 351 aa15.74■□□□□ 0.11
TARDBP-201ENST00000240185 TMEM67Q5HYA8 995 aa15.74■□□□□ 0.11
TARDBP-201ENST00000240185 CCDC174Q6PII3 467 aa15.74■□□□□ 0.11
TARDBP-201ENST00000240185 SLC26A6Q9BXS9 759 aa15.74■□□□□ 0.11
TARDBP-201ENST00000240185 FYCO1Q9BQS8 1478 aa15.74■□□□□ 0.11
TARDBP-201ENST00000240185 RAB11FIP4Q86YS3 637 aa15.73■□□□□ 0.11
TARDBP-201ENST00000240185 MTRF1LQ9UGC7 380 aaKnown RBP15.73■□□□□ 0.11
TARDBP-201ENST00000240185 TRMT1LQ7Z2T5 733 aaKnown RBP15.73■□□□□ 0.11
TARDBP-201ENST00000240185 PPP1R9BQ96SB3 815 aa15.73■□□□□ 0.11
TARDBP-201ENST00000240185 POLA1P09884 1462 aaPredicted RBP15.73■□□□□ 0.11
TARDBP-201ENST00000240185 CCDC25Q86WR0 208 aa15.73■□□□□ 0.11
TARDBP-201ENST00000240185 CRACR2BQ8N4Y2 399 aaPredicted RBP15.73■□□□□ 0.11
TARDBP-201ENST00000240185 CASQ2O14958 399 aaPredicted RBP15.73■□□□□ 0.11
TARDBP-201ENST00000240185 LRPPRCP42704 1394 aaKnown RBP15.73■□□□□ 0.11
TARDBP-201ENST00000240185 ESCO1Q5FWF5 840 aa15.73■□□□□ 0.11
TARDBP-201ENST00000240185 ECHDC1Q9NTX5 307 aa15.73■□□□□ 0.11
TARDBP-201ENST00000240185 NKTRP30414 1462 aaKnown RBP15.72■□□□□ 0.11
TARDBP-201ENST00000240185 ZNF853P0CG23 659 aa15.72■□□□□ 0.11
TARDBP-201ENST00000240185 MAP2K2P36507 400 aa15.72■□□□□ 0.11
TARDBP-201ENST00000240185 ZNF692Q9BU19 519 aaPredicted RBP15.72■□□□□ 0.11
TARDBP-201ENST00000240185 HMGXB3Q12766 1538 aa15.72■□□□□ 0.11
TARDBP-201ENST00000240185 PSMA7O14818 248 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms