RNA–Protein interactions for RNA: ENST00000239852.10

MTRF1-201, Transcript of mitochondrial translation release factor 1, humanhuman

TSL 1 (best)

Gene MTRF1, Length 1,561 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTRF1-201ENST00000239852 PCDH11YQ9BZA8 1340 aa9.42□□□□□ -0.9
MTRF1-201ENST00000239852 CNTNAP4Q9C0A0 1308 aa9.42□□□□□ -0.9
MTRF1-201ENST00000239852 NOM1Q5C9Z4 860 aaKnown RBP9.41□□□□□ -0.9
MTRF1-201ENST00000239852 RGMBQ6NW40 437 aa9.41□□□□□ -0.9
MTRF1-201ENST00000239852 SYMPKQ92797 1274 aaKnown RBP9.41□□□□□ -0.9
MTRF1-201ENST00000239852 CSRNP1Q96S65 589 aa9.41□□□□□ -0.9
MTRF1-201ENST00000239852 SRP68Q9UHB9 627 aaKnown RBP9.41□□□□□ -0.9
MTRF1-201ENST00000239852 PDZRN3Q9UPQ7 1066 aa9.41□□□□□ -0.9
MTRF1-201ENST00000239852 TPD52L2O43399 206 aaKnown RBP9.41□□□□□ -0.9
MTRF1-201ENST00000239852 MAP3K12Q12852 859 aa9.41□□□□□ -0.9
MTRF1-201ENST00000239852 MYBPC2Q14324 1141 aa9.41□□□□□ -0.9
MTRF1-201ENST00000239852 SPATA32Q96LK8 384 aa9.41□□□□□ -0.9
MTRF1-201ENST00000239852 MTMR10Q9NXD2 777 aa9.41□□□□□ -0.9
MTRF1-201ENST00000239852 ARIH1Q9Y4X5 557 aaPredicted RBP9.41□□□□□ -0.9
MTRF1-201ENST00000239852 AFDNP55196 1824 aaKnown RBP9.4□□□□□ -0.9
MTRF1-201ENST00000239852 FZD9O00144 591 aa9.4□□□□□ -0.9
MTRF1-201ENST00000239852 BRD1O95696 1058 aa9.4□□□□□ -0.9
MTRF1-201ENST00000239852 SETDB1Q15047 1291 aa9.4□□□□□ -0.9
MTRF1-201ENST00000239852 CCDC82Q8N4S0 544 aa9.4□□□□□ -0.9
MTRF1-201ENST00000239852 ZBTB12Q9Y330 459 aaPredicted RBP9.4□□□□□ -0.9
MTRF1-201ENST00000239852 LAMA2P24043 3122 aaKnown RBP9.4□□□□□ -0.91
MTRF1-201ENST00000239852 MUC6Q6W4X9 2439 aa9.39□□□□□ -0.91
MTRF1-201ENST00000239852 TMEM265A0A087WTH1 108 aa9.39□□□□□ -0.91
MTRF1-201ENST00000239852 RALBP1Q15311 655 aa9.39□□□□□ -0.91
MTRF1-201ENST00000239852 CC2D1BQ5T0F9 858 aaKnown RBP9.39□□□□□ -0.91
MTRF1-201ENST00000239852 IP6K1Q92551 441 aa9.39□□□□□ -0.91
MTRF1-201ENST00000239852 LTV1Q96GA3 475 aaPredicted RBP9.39□□□□□ -0.91
MTRF1-201ENST00000239852 ZNF408Q9H9D4 720 aa9.39□□□□□ -0.91
MTRF1-201ENST00000239852 ASAP1Q9ULH1 1129 aa9.39□□□□□ -0.91
MTRF1-201ENST00000239852 NRXN2Q9P2S2 1712 aa9.39□□□□□ -0.91
MTRF1-201ENST00000239852 ANP32CO43423 234 aa9.38□□□□□ -0.91
MTRF1-201ENST00000239852 MKRN4PQ13434 485 aaPredicted RBP9.38□□□□□ -0.91
MTRF1-201ENST00000239852 EPS15P42566 896 aa9.37□□□□□ -0.91
MTRF1-201ENST00000239852 RAPGEF4Q8WZA2 1011 aa9.37□□□□□ -0.91
MTRF1-201ENST00000239852 GLIS2Q9BZE0 524 aaPredicted RBP9.37□□□□□ -0.91
MTRF1-201ENST00000239852 MYH14Q7Z406 1995 aaKnown RBP9.37□□□□□ -0.91
MTRF1-201ENST00000239852 KDRP35968 1356 aa9.37□□□□□ -0.91
MTRF1-201ENST00000239852 GPR25O00155 361 aa9.37□□□□□ -0.91
MTRF1-201ENST00000239852 SMARCA5O60264 1052 aaPredicted RBP9.37□□□□□ -0.91
MTRF1-201ENST00000239852 MARCH6O60337 910 aa9.37□□□□□ -0.91
MTRF1-201ENST00000239852 ZNF157P51786 506 aaPredicted RBP9.37□□□□□ -0.91
MTRF1-201ENST00000239852 NBPF9Q3BBW0 867 aa9.37□□□□□ -0.91
MTRF1-201ENST00000239852 Q7L0L9 218 aa9.37□□□□□ -0.91
MTRF1-201ENST00000239852 NME8Q8N427 588 aa9.37□□□□□ -0.91
MTRF1-201ENST00000239852 FBXW7Q969H0 707 aa9.37□□□□□ -0.91
MTRF1-201ENST00000239852 ARMC5Q96C12 935 aa9.37□□□□□ -0.91
MTRF1-201ENST00000239852 TMEM106CQ9BVX2 250 aa9.37□□□□□ -0.91
MTRF1-201ENST00000239852 TNFRSF10AO00220 468 aa9.36□□□□□ -0.91
MTRF1-201ENST00000239852 GOLIM4O00461 696 aa9.36□□□□□ -0.91
MTRF1-201ENST00000239852 CYP27B1O15528 508 aa9.36□□□□□ -0.91
MTRF1-201ENST00000239852 ITGAEP38570 1179 aa9.36□□□□□ -0.91
MTRF1-201ENST00000239852 SCNN1DP51172 638 aa9.36□□□□□ -0.91
MTRF1-201ENST00000239852 FOXD4L6Q3SYB3 417 aaPredicted RBP9.36□□□□□ -0.91
MTRF1-201ENST00000239852 FOXD4L3Q6VB84 417 aaPredicted RBP9.36□□□□□ -0.91
MTRF1-201ENST00000239852 OTUD6BQ8N6M0 293 aa9.36□□□□□ -0.91
MTRF1-201ENST00000239852 UBA5Q9GZZ9 404 aa9.36□□□□□ -0.91
MTRF1-201ENST00000239852 TMOD3Q9NYL9 352 aa9.36□□□□□ -0.91
MTRF1-201ENST00000239852 ZNF831Q5JPB2 1677 aa9.35□□□□□ -0.91
MTRF1-201ENST00000239852 FKTNO75072 461 aa9.35□□□□□ -0.91
MTRF1-201ENST00000239852 SERPINB2P05120 415 aa9.35□□□□□ -0.91
MTRF1-201ENST00000239852 SLC10A3P09131 477 aa9.35□□□□□ -0.91
MTRF1-201ENST00000239852 TATP17735 454 aaPredicted RBP9.35□□□□□ -0.91
MTRF1-201ENST00000239852 PSEN1P49768 467 aa9.35□□□□□ -0.91
MTRF1-201ENST00000239852 MCCD1P59942 119 aaPredicted RBP9.35□□□□□ -0.91
MTRF1-201ENST00000239852 SDR16C5Q8N3Y7 309 aa9.35□□□□□ -0.91
MTRF1-201ENST00000239852 CNKSR1Q969H4 720 aa9.35□□□□□ -0.91
MTRF1-201ENST00000239852 MKL1Q969V6 931 aa9.35□□□□□ -0.91
MTRF1-201ENST00000239852 SH3BP1Q9Y3L3 701 aa9.35□□□□□ -0.91
MTRF1-201ENST00000239852 PPME1Q9Y570 386 aa9.35□□□□□ -0.91
MTRF1-201ENST00000239852 COL5A3P25940 1745 aaPredicted RBP9.35□□□□□ -0.91
MTRF1-201ENST00000239852 TCERG1O14776 1098 aaKnown RBP9.34□□□□□ -0.91
MTRF1-201ENST00000239852 TBC1D8O95759 1140 aa9.34□□□□□ -0.91
MTRF1-201ENST00000239852 PDE6BP35913 854 aa9.34□□□□□ -0.91
MTRF1-201ENST00000239852 FKBP4Q02790 459 aaKnown RBP eCLIP9.34□□□□□ -0.91
MTRF1-201ENST00000239852 NFIXQ14938 502 aa9.34□□□□□ -0.91
MTRF1-201ENST00000239852 HSP90AB3PQ58FF7 597 aa9.34□□□□□ -0.91
MTRF1-201ENST00000239852 EGFL6Q8IUX8 553 aa9.34□□□□□ -0.91
MTRF1-201ENST00000239852 IL27Q8NEV9 243 aa9.34□□□□□ -0.91
MTRF1-201ENST00000239852 DPF3Q92784 378 aa9.34□□□□□ -0.91
MTRF1-201ENST00000239852 ZNF277Q9NRM2 450 aaPredicted RBP9.34□□□□□ -0.91
MTRF1-201ENST00000239852 ATG3Q9NT62 314 aa9.34□□□□□ -0.91
MTRF1-201ENST00000239852 PGAP2Q9UHJ9 254 aa9.34□□□□□ -0.91
MTRF1-201ENST00000239852 GJA3Q9Y6H8 435 aa9.34□□□□□ -0.91
MTRF1-201ENST00000239852 RPTORQ8N122 1335 aa9.34□□□□□ -0.91
MTRF1-201ENST00000239852 CARMIL3Q8ND23 1372 aa9.34□□□□□ -0.91
MTRF1-201ENST00000239852 SLX4Q8IY92 1834 aa9.34□□□□□ -0.91
MTRF1-201ENST00000239852 ZPR1O75312 459 aa9.33□□□□□ -0.92
MTRF1-201ENST00000239852 HDAC1Q13547 482 aaPredicted RBP9.33□□□□□ -0.92
MTRF1-201ENST00000239852 NKX1-1Q15270 411 aaPredicted RBP9.33□□□□□ -0.92
MTRF1-201ENST00000239852 CCDC93Q567U6 631 aa9.33□□□□□ -0.92
MTRF1-201ENST00000239852 CDC37L1Q7L3B6 337 aa9.33□□□□□ -0.92
MTRF1-201ENST00000239852 SLC4A9Q96Q91 983 aa9.33□□□□□ -0.92
MTRF1-201ENST00000239852 ADARB2Q9NS39 739 aaKnown RBP9.33□□□□□ -0.92
MTRF1-201ENST00000239852 FEZ2Q9UHY8 353 aaPredicted RBP9.33□□□□□ -0.92
MTRF1-201ENST00000239852 NUB1Q9Y5A7 615 aa9.33□□□□□ -0.92
MTRF1-201ENST00000239852 BDP1A6H8Y1 2624 aa9.33□□□□□ -0.92
MTRF1-201ENST00000239852 EIF6P56537 245 aaKnown RBP9.33□□□□□ -0.92
MTRF1-201ENST00000239852 CCDC96Q2M329 555 aa9.33□□□□□ -0.92
MTRF1-201ENST00000239852 TAF3Q5VWG9 929 aa9.33□□□□□ -0.92
MTRF1-201ENST00000239852 PRPF40BQ6NWY9 871 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms