RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 CCDC85AQ96PX6 553 aaPredicted RBP18.63■□□□□ 0.57
HDHD3-201ENST00000238379 TLR7Q9NYK1 1049 aaKnown RBP18.63■□□□□ 0.57
HDHD3-201ENST00000238379 RGS17Q9UGC6 210 aaPredicted RBP18.63■□□□□ 0.57
HDHD3-201ENST00000238379 FBXO3Q9UK99 471 aa18.63■□□□□ 0.57
HDHD3-201ENST00000238379 FPGT-TNNI3KV9GXZ4 949 aa18.63■□□□□ 0.57
HDHD3-201ENST00000238379 SCN7AQ01118 1682 aa18.62■□□□□ 0.57
HDHD3-201ENST00000238379 FAM177BA6PVY3 158 aa18.62■□□□□ 0.57
HDHD3-201ENST00000238379 TRIM6-TRIM34B2RNG4 842 aa18.62■□□□□ 0.57
HDHD3-201ENST00000238379 ERC2O15083 957 aa18.62■□□□□ 0.57
HDHD3-201ENST00000238379 SLC27A3Q5K4L6 730 aa18.62■□□□□ 0.57
HDHD3-201ENST00000238379 ARHGEF1Q92888 912 aaKnown RBP18.62■□□□□ 0.57
HDHD3-201ENST00000238379 PUS3Q9BZE2 481 aaKnown RBP18.62■□□□□ 0.57
HDHD3-201ENST00000238379 C22orf23Q9BZE7 217 aa18.62■□□□□ 0.57
HDHD3-201ENST00000238379 GREM2Q9H772 168 aa18.62■□□□□ 0.57
HDHD3-201ENST00000238379 USPL1Q5W0Q7 1092 aa18.61■□□□□ 0.57
HDHD3-201ENST00000238379 CASC1Q6TDU7 716 aa18.61■□□□□ 0.57
HDHD3-201ENST00000238379 RILPL2Q969X0 211 aa18.61■□□□□ 0.57
HDHD3-201ENST00000238379 GPR108Q9NPR9 543 aa18.61■□□□□ 0.57
HDHD3-201ENST00000238379 SRP68Q9UHB9 627 aaKnown RBP18.61■□□□□ 0.57
HDHD3-201ENST00000238379 MYH3P11055 1940 aa18.61■□□□□ 0.57
HDHD3-201ENST00000238379 MSH5O43196 834 aa18.6■□□□□ 0.57
HDHD3-201ENST00000238379 HCLS1P14317 486 aaPredicted RBP18.6■□□□□ 0.57
HDHD3-201ENST00000238379 ITGA6P23229 1130 aa18.6■□□□□ 0.57
HDHD3-201ENST00000238379 EIF5BO60841 1220 aaKnown RBP18.6■□□□□ 0.57
HDHD3-201ENST00000238379 TBC1D9BQ66K14 1250 aa18.6■□□□□ 0.57
HDHD3-201ENST00000238379 DBNLQ9UJU6 430 aaKnown RBP18.6■□□□□ 0.57
HDHD3-201ENST00000238379 ZPR1O75312 459 aa18.59■□□□□ 0.57
HDHD3-201ENST00000238379 DDRGK1Q96HY6 314 aa18.59■□□□□ 0.57
HDHD3-201ENST00000238379 ANKRD18BA2A2Z9 1011 aa18.58■□□□□ 0.57
HDHD3-201ENST00000238379 MAP4K4O95819 1239 aaPredicted RBP18.58■□□□□ 0.57
HDHD3-201ENST00000238379 CHMLP26374 656 aa18.58■□□□□ 0.57
HDHD3-201ENST00000238379 RBM25P49756 843 aaKnown RBP18.58■□□□□ 0.57
HDHD3-201ENST00000238379 TRAPPC3LQ5T215 181 aa18.58■□□□□ 0.57
HDHD3-201ENST00000238379 PROM2Q8N271 834 aa18.58■□□□□ 0.57
HDHD3-201ENST00000238379 HSP90B1P14625 803 aaKnown RBP18.58■□□□□ 0.56
HDHD3-201ENST00000238379 TAF7LQ5H9L4 462 aa18.58■□□□□ 0.56
HDHD3-201ENST00000238379 POTEAQ6S8J7 498 aa18.57■□□□□ 0.56
HDHD3-201ENST00000238379 CNTROBQ8N137 903 aa18.57■□□□□ 0.56
HDHD3-201ENST00000238379 RIPOR2Q9Y4F9 1068 aa18.57■□□□□ 0.56
HDHD3-201ENST00000238379 DDX60Q8IY21 1712 aaKnown RBP18.57■□□□□ 0.56
HDHD3-201ENST00000238379 PHF14O94880 888 aa18.56■□□□□ 0.56
HDHD3-201ENST00000238379 ADRA2BP18089 450 aa18.56■□□□□ 0.56
HDHD3-201ENST00000238379 RFC4P35249 363 aa18.56■□□□□ 0.56
HDHD3-201ENST00000238379 TXNRD1Q16881 649 aa18.56■□□□□ 0.56
HDHD3-201ENST00000238379 BICDL1Q6ZP65 573 aa18.56■□□□□ 0.56
HDHD3-201ENST00000238379 DBNDD2Q9BQY9 259 aa18.56■□□□□ 0.56
HDHD3-201ENST00000238379 CEP126Q9P2H0 1117 aa18.56■□□□□ 0.56
HDHD3-201ENST00000238379 LDHAL6AQ6ZMR3 332 aa18.56■□□□□ 0.56
HDHD3-201ENST00000238379 C4AP0C0L4 1744 aa18.55■□□□□ 0.56
HDHD3-201ENST00000238379 LAMB2P55268 1798 aa18.55■□□□□ 0.56
HDHD3-201ENST00000238379 PLSCR1O15162 318 aa18.55■□□□□ 0.56
HDHD3-201ENST00000238379 ATP5JP18859 108 aa18.55■□□□□ 0.56
HDHD3-201ENST00000238379 TIMM10P62072 90 aa18.55■□□□□ 0.56
HDHD3-201ENST00000238379 ERFEQ4G0M1 354 aa18.55■□□□□ 0.56
HDHD3-201ENST00000238379 SETDB2Q96T68 719 aa18.55■□□□□ 0.56
HDHD3-201ENST00000238379 ESYT1Q9BSJ8 1104 aa18.55■□□□□ 0.56
HDHD3-201ENST00000238379 ZNF609O15014 1411 aa18.55■□□□□ 0.56
HDHD3-201ENST00000238379 UBR3Q6ZT12 1888 aa18.54■□□□□ 0.56
HDHD3-201ENST00000238379 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.54■□□□□ 0.56
HDHD3-201ENST00000238379 USP26Q9BXU7 913 aa18.54■□□□□ 0.56
HDHD3-201ENST00000238379 BOLA2Q9H3K6 86 aa18.54■□□□□ 0.56
HDHD3-201ENST00000238379 RTL9Q8NET4 1388 aa18.54■□□□□ 0.56
HDHD3-201ENST00000238379 A0A1B0GUL7 405 aa18.53■□□□□ 0.56
HDHD3-201ENST00000238379 CCDC152Q4G0S7 254 aa18.53■□□□□ 0.56
HDHD3-201ENST00000238379 SLC10A5Q5PT55 438 aa18.53■□□□□ 0.56
HDHD3-201ENST00000238379 EVI5LQ96CN4 794 aa18.53■□□□□ 0.56
HDHD3-201ENST00000238379 RIC1Q4ADV7 1423 aa18.53■□□□□ 0.56
HDHD3-201ENST00000238379 LRP5O75197 1615 aa18.53■□□□□ 0.56
HDHD3-201ENST00000238379 REC8O95072 547 aa18.53■□□□□ 0.56
HDHD3-201ENST00000238379 COL24A1Q17RW2 1714 aa18.53■□□□□ 0.56
HDHD3-201ENST00000238379 AK9Q5TCS8 1911 aa18.53■□□□□ 0.56
HDHD3-201ENST00000238379 NEUROD6Q96NK8 337 aa18.53■□□□□ 0.56
HDHD3-201ENST00000238379 APBA3O96018 575 aa18.52■□□□□ 0.56
HDHD3-201ENST00000238379 HMGB2P26583 209 aaKnown RBP18.52■□□□□ 0.56
HDHD3-201ENST00000238379 SSFA2P28290 1259 aa18.52■□□□□ 0.56
HDHD3-201ENST00000238379 NYXQ9GZU5 481 aa18.52■□□□□ 0.56
HDHD3-201ENST00000238379 SEC31BQ9NQW1 1179 aa18.52■□□□□ 0.56
HDHD3-201ENST00000238379 CNNM1Q9NRU3 951 aa18.52■□□□□ 0.56
HDHD3-201ENST00000238379 AKAP2Q9Y2D5 859 aa18.52■□□□□ 0.56
HDHD3-201ENST00000238379 VGLL2Q8N8G2 317 aa18.51■□□□□ 0.55
HDHD3-201ENST00000238379 SF3B3Q15393 1217 aaKnown RBP18.51■□□□□ 0.55
HDHD3-201ENST00000238379 METTL24Q5JXM2 366 aa18.51■□□□□ 0.55
HDHD3-201ENST00000238379 KIF2CQ99661 725 aa18.51■□□□□ 0.55
HDHD3-201ENST00000238379 ABCC12Q96J65 1359 aa18.5■□□□□ 0.55
HDHD3-201ENST00000238379 GTF2E1P29083 439 aaPredicted RBP18.5■□□□□ 0.55
HDHD3-201ENST00000238379 C3orf67Q6ZVT6 689 aa18.5■□□□□ 0.55
HDHD3-201ENST00000238379 NBPF5PQ86XG9 351 aaPredicted RBP18.5■□□□□ 0.55
HDHD3-201ENST00000238379 IL25Q9H293 177 aa18.5■□□□□ 0.55
HDHD3-201ENST00000238379 NFIXQ14938 502 aa18.49■□□□□ 0.55
HDHD3-201ENST00000238379 TPTE2Q6XPS3 522 aa18.49■□□□□ 0.55
HDHD3-201ENST00000238379 HAUS7Q99871 368 aa18.49■□□□□ 0.55
HDHD3-201ENST00000238379 PDE8BO95263 885 aa18.49■□□□□ 0.55
HDHD3-201ENST00000238379 SGSM2O43147 1006 aa18.48■□□□□ 0.55
HDHD3-201ENST00000238379 GYS1P13807 737 aa18.48■□□□□ 0.55
HDHD3-201ENST00000238379 ATP2B3Q16720 1220 aa18.48■□□□□ 0.55
HDHD3-201ENST00000238379 XAGE2Q96GT9 111 aa18.48■□□□□ 0.55
HDHD3-201ENST00000238379 MROH5Q6ZUA9 1318 aa18.47■□□□□ 0.55
HDHD3-201ENST00000238379 ADORA1P30542 326 aa18.47■□□□□ 0.55
HDHD3-201ENST00000238379 EDC3Q96F86 508 aaKnown RBP18.47■□□□□ 0.55
HDHD3-201ENST00000238379 MPHOSPH8Q99549 860 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms