RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 G3BP1Q13283 466 aaKnown RBP eCLIP18.32■□□□□ 0.52
DDX55-201ENST00000238146 TSGA10IPQ3SY00 556 aa18.32■□□□□ 0.52
DDX55-201ENST00000238146 NBPF6Q5VWK0 638 aa18.32■□□□□ 0.52
DDX55-201ENST00000238146 NBPF4Q96M43 638 aa18.32■□□□□ 0.52
DDX55-201ENST00000238146 HDAC5Q9UQL6 1122 aa18.32■□□□□ 0.52
DDX55-201ENST00000238146 KDM3BQ7LBC6 1761 aa18.32■□□□□ 0.52
DDX55-201ENST00000238146 NAA30Q147X3 362 aaPredicted RBP18.31■□□□□ 0.52
DDX55-201ENST00000238146 SUCLG2Q96I99 432 aa18.31■□□□□ 0.52
DDX55-201ENST00000238146 OGFRQ9NZT2 677 aa18.31■□□□□ 0.52
DDX55-201ENST00000238146 CTNNA3Q9UI47 895 aa18.31■□□□□ 0.52
DDX55-201ENST00000238146 GIGYF1O75420 1035 aaPredicted RBP18.31■□□□□ 0.52
DDX55-201ENST00000238146 RESTQ13127 1097 aa18.31■□□□□ 0.52
DDX55-201ENST00000238146 TPD52L1Q16890 204 aaPredicted RBP18.31■□□□□ 0.52
DDX55-201ENST00000238146 HMG20BQ9P0W2 317 aa18.31■□□□□ 0.52
DDX55-201ENST00000238146 CDC25BP30305 580 aa18.3■□□□□ 0.52
DDX55-201ENST00000238146 CCDC112Q8NEF3 446 aa18.3■□□□□ 0.52
DDX55-201ENST00000238146 CAVIN2O95810 425 aa18.3■□□□□ 0.52
DDX55-201ENST00000238146 IQCB1Q15051 598 aa18.3■□□□□ 0.52
DDX55-201ENST00000238146 BRF1Q92994 677 aa18.3■□□□□ 0.52
DDX55-201ENST00000238146 GTF3C6Q969F1 213 aa18.3■□□□□ 0.52
DDX55-201ENST00000238146 BICC1Q9H694 974 aaKnown RBP18.3■□□□□ 0.52
DDX55-201ENST00000238146 JCADQ9P266 1359 aa18.3■□□□□ 0.52
DDX55-201ENST00000238146 GRM8O00222 908 aa18.29■□□□□ 0.52
DDX55-201ENST00000238146 TAF5LO75529 589 aa18.29■□□□□ 0.52
DDX55-201ENST00000238146 MPRIPQ6WCQ1 1025 aa18.29■□□□□ 0.52
DDX55-201ENST00000238146 DDX11Q96FC9 970 aa18.29■□□□□ 0.52
DDX55-201ENST00000238146 LRRC8AQ8IWT6 810 aa18.28■□□□□ 0.52
DDX55-201ENST00000238146 SIL1Q9H173 461 aa18.28■□□□□ 0.52
DDX55-201ENST00000238146 TBX22Q9Y458 520 aa18.28■□□□□ 0.52
DDX55-201ENST00000238146 IGSF3O75054 1194 aa18.28■□□□□ 0.52
DDX55-201ENST00000238146 USPL1Q5W0Q7 1092 aa18.28■□□□□ 0.52
DDX55-201ENST00000238146 SARM1Q6SZW1 724 aa18.28■□□□□ 0.52
DDX55-201ENST00000238146 LINS1Q8NG48 757 aa18.28■□□□□ 0.52
DDX55-201ENST00000238146 IP6K1Q92551 441 aa18.28■□□□□ 0.52
DDX55-201ENST00000238146 EID1Q9Y6B2 187 aa18.28■□□□□ 0.52
DDX55-201ENST00000238146 ARID5BQ14865 1188 aa18.27■□□□□ 0.52
DDX55-201ENST00000238146 C11orf57Q6ZUT1 292 aaPredicted RBP18.27■□□□□ 0.52
DDX55-201ENST00000238146 CGNQ9P2M7 1197 aaKnown RBP18.27■□□□□ 0.52
DDX55-201ENST00000238146 UTYO14607 1347 aa18.27■□□□□ 0.52
DDX55-201ENST00000238146 AKAP4Q5JQC9 854 aa18.27■□□□□ 0.52
DDX55-201ENST00000238146 CEP135Q66GS9 1140 aa18.27■□□□□ 0.52
DDX55-201ENST00000238146 ZNF530Q6P9A1 599 aaPredicted RBP18.27■□□□□ 0.52
DDX55-201ENST00000238146 EDC3Q96F86 508 aaKnown RBP18.27■□□□□ 0.52
DDX55-201ENST00000238146 PRAMEF22A3QJZ6 481 aa18.26■□□□□ 0.51
DDX55-201ENST00000238146 GOLGA6L19H0YKK7 550 aa18.26■□□□□ 0.51
DDX55-201ENST00000238146 C14orf37Q86TY3 774 aa18.26■□□□□ 0.51
DDX55-201ENST00000238146 MRFAP1L1Q96HT8 127 aa18.26■□□□□ 0.51
DDX55-201ENST00000238146 USP27XA6NNY8 438 aa18.26■□□□□ 0.51
DDX55-201ENST00000238146 H3BQV1 296 aa18.26■□□□□ 0.51
DDX55-201ENST00000238146 RBM6P78332 1123 aaKnown RBP18.26■□□□□ 0.51
DDX55-201ENST00000238146 KRT32Q14532 448 aa18.26■□□□□ 0.51
DDX55-201ENST00000238146 IFFO2Q5TF58 517 aa18.26■□□□□ 0.51
DDX55-201ENST00000238146 NEK1Q96PY6 1258 aa18.26■□□□□ 0.51
DDX55-201ENST00000238146 ZSCAN16Q9H4T2 348 aaPredicted RBP18.26■□□□□ 0.51
DDX55-201ENST00000238146 DDX41Q9UJV9 622 aaKnown RBP18.26■□□□□ 0.51
DDX55-201ENST00000238146 CFAP45Q9UL16 551 aa18.26■□□□□ 0.51
DDX55-201ENST00000238146 KLHDC4Q8TBB5 520 aa18.26■□□□□ 0.51
DDX55-201ENST00000238146 ZNF592Q92610 1267 aa18.26■□□□□ 0.51
DDX55-201ENST00000238146 COL15A1P39059 1388 aa18.25■□□□□ 0.51
DDX55-201ENST00000238146 ANKARQ7Z5J8 1434 aa18.25■□□□□ 0.51
DDX55-201ENST00000238146 CEBPZQ03701 1054 aaKnown RBP18.25■□□□□ 0.51
DDX55-201ENST00000238146 USP54Q70EL1 1684 aa18.25■□□□□ 0.51
DDX55-201ENST00000238146 ADD1P35611 737 aaKnown RBP18.25■□□□□ 0.51
DDX55-201ENST00000238146 Q6ZUG5 572 aa18.25■□□□□ 0.51
DDX55-201ENST00000238146 RNMTO43148 476 aaKnown RBP18.24■□□□□ 0.51
DDX55-201ENST00000238146 NEMFO60524 1076 aa18.24■□□□□ 0.51
DDX55-201ENST00000238146 NYAP1Q6ZVC0 841 aa18.24■□□□□ 0.51
DDX55-201ENST00000238146 HEG1Q9ULI3 1381 aa18.24■□□□□ 0.51
DDX55-201ENST00000238146 SLIT1O75093 1534 aa18.23■□□□□ 0.51
DDX55-201ENST00000238146 STX1AQ16623 288 aa18.23■□□□□ 0.51
DDX55-201ENST00000238146 CTAGE5O15320 804 aa18.23■□□□□ 0.51
DDX55-201ENST00000238146 SKILP12757 684 aa18.23■□□□□ 0.51
DDX55-201ENST00000238146 HSP90B1P14625 803 aaKnown RBP18.23■□□□□ 0.51
DDX55-201ENST00000238146 PLEKHO1Q53GL0 409 aaPredicted RBP18.23■□□□□ 0.51
DDX55-201ENST00000238146 CCAR1Q8IX12 1150 aaKnown RBP18.23■□□□□ 0.51
DDX55-201ENST00000238146 LRRC59Q96AG4 307 aaKnown RBP18.23■□□□□ 0.51
DDX55-201ENST00000238146 RCOR1Q9UKL0 485 aa18.23■□□□□ 0.51
DDX55-201ENST00000238146 USP16Q9Y5T5 823 aa18.23■□□□□ 0.51
DDX55-201ENST00000238146 SCRN1Q12765 414 aa18.22■□□□□ 0.51
DDX55-201ENST00000238146 AIMP1Q12904 312 aaKnown RBP18.22■□□□□ 0.51
DDX55-201ENST00000238146 KIF18AQ8NI77 898 aa18.22■□□□□ 0.51
DDX55-201ENST00000238146 SMARCC2Q8TAQ2 1214 aa18.22■□□□□ 0.51
DDX55-201ENST00000238146 FTOQ9C0B1 505 aaKnown RBP eCLIP18.22■□□□□ 0.51
DDX55-201ENST00000238146 GOLPH3LQ9H4A5 285 aa18.22■□□□□ 0.51
DDX55-201ENST00000238146 MORC2Q9Y6X9 1032 aaPredicted RBP18.22■□□□□ 0.51
DDX55-201ENST00000238146 IGKV5-2P06315 115 aa18.22■□□□□ 0.51
DDX55-201ENST00000238146 SNW1Q13573 536 aaKnown RBP18.22■□□□□ 0.51
DDX55-201ENST00000238146 PTPN14Q15678 1187 aa18.22■□□□□ 0.51
DDX55-201ENST00000238146 BCL11BQ9C0K0 894 aaPredicted RBP18.22■□□□□ 0.51
DDX55-201ENST00000238146 ZNF215Q9UL58 517 aaPredicted RBP18.22■□□□□ 0.51
DDX55-201ENST00000238146 CHGBP05060 677 aa18.21■□□□□ 0.51
DDX55-201ENST00000238146 CYP21A2P08686 494 aa18.21■□□□□ 0.51
DDX55-201ENST00000238146 SETD1BQ9UPS6 1966 aaKnown RBP18.21■□□□□ 0.51
DDX55-201ENST00000238146 A0A087WWV3 80 aa18.21■□□□□ 0.51
DDX55-201ENST00000238146 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.21■□□□□ 0.51
DDX55-201ENST00000238146 CCDC69A6NI79 296 aa18.21■□□□□ 0.51
DDX55-201ENST00000238146 CCZ1BP86790 482 aa18.21■□□□□ 0.51
DDX55-201ENST00000238146 CCZ1P86791 482 aaPredicted RBP18.21■□□□□ 0.51
DDX55-201ENST00000238146 DHX40Q8IX18 779 aaKnown RBP18.21■□□□□ 0.51
DDX55-201ENST00000238146 LRRC2Q9BYS8 371 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms