RNA–Protein interactions for RNA: ENST00000235349.5

PRAMEF4-201, Transcript of PRAME family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF4, Length 1,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4-201ENST00000235349 TTLL11Q8NHH1 800 aa12.49□□□□□ -0.41
PRAMEF4-201ENST00000235349 COPRSQ9NQ92 184 aa12.49□□□□□ -0.41
PRAMEF4-201ENST00000235349 TUBGCP6Q96RT7 1819 aa12.49□□□□□ -0.41
PRAMEF4-201ENST00000235349 DDX60Q8IY21 1712 aaKnown RBP12.49□□□□□ -0.41
PRAMEF4-201ENST00000235349 ERFEQ4G0M1 354 aa12.48□□□□□ -0.41
PRAMEF4-201ENST00000235349 CCDC24Q8N4L8 307 aa12.48□□□□□ -0.41
PRAMEF4-201ENST00000235349 KIF1BPQ96EK5 621 aa12.48□□□□□ -0.41
PRAMEF4-201ENST00000235349 SETDB2Q96T68 719 aa12.48□□□□□ -0.41
PRAMEF4-201ENST00000235349 TFCP2L1Q9NZI6 479 aa12.48□□□□□ -0.41
PRAMEF4-201ENST00000235349 SH3TC1Q8TE82 1336 aa12.48□□□□□ -0.41
PRAMEF4-201ENST00000235349 PDE8AO60658 829 aa12.48□□□□□ -0.41
PRAMEF4-201ENST00000235349 ADRA2BP18089 450 aa12.48□□□□□ -0.41
PRAMEF4-201ENST00000235349 SSFA2P28290 1259 aa12.48□□□□□ -0.41
PRAMEF4-201ENST00000235349 CTSWP56202 376 aa12.48□□□□□ -0.41
PRAMEF4-201ENST00000235349 HSP90AB4PQ58FF6 505 aa12.48□□□□□ -0.41
PRAMEF4-201ENST00000235349 TSHZ3Q63HK5 1081 aa12.48□□□□□ -0.41
PRAMEF4-201ENST00000235349 PUS3Q9BZE2 481 aaKnown RBP12.48□□□□□ -0.41
PRAMEF4-201ENST00000235349 GREM2Q9H772 168 aa12.48□□□□□ -0.41
PRAMEF4-201ENST00000235349 TAF1P21675 1872 aa12.48□□□□□ -0.41
PRAMEF4-201ENST00000235349 RGL2O15211 777 aa12.47□□□□□ -0.41
PRAMEF4-201ENST00000235349 GYS1P13807 737 aa12.47□□□□□ -0.41
PRAMEF4-201ENST00000235349 LRRC24Q50LG9 513 aa12.47□□□□□ -0.41
PRAMEF4-201ENST00000235349 C3orf67Q6ZVT6 689 aa12.47□□□□□ -0.41
PRAMEF4-201ENST00000235349 ATG9AQ7Z3C6 839 aa12.47□□□□□ -0.41
PRAMEF4-201ENST00000235349 DEFB132Q7Z7B7 95 aa12.47□□□□□ -0.41
PRAMEF4-201ENST00000235349 COL23A1Q86Y22 540 aaPredicted RBP12.47□□□□□ -0.41
PRAMEF4-201ENST00000235349 SALL3Q9BXA9 1300 aa12.46□□□□□ -0.41
PRAMEF4-201ENST00000235349 NFIXQ14938 502 aa12.46□□□□□ -0.41
PRAMEF4-201ENST00000235349 C8orf34Q49A92 452 aa12.46□□□□□ -0.41
PRAMEF4-201ENST00000235349 GLIPR1L2Q4G1C9 344 aa12.46□□□□□ -0.41
PRAMEF4-201ENST00000235349 CASZ1Q86V15 1759 aa12.46□□□□□ -0.41
PRAMEF4-201ENST00000235349 PDE1AP54750 535 aa12.46□□□□□ -0.42
PRAMEF4-201ENST00000235349 TFCP2Q12800 502 aa12.46□□□□□ -0.42
PRAMEF4-201ENST00000235349 CCDC57Q2TAC2 916 aa12.46□□□□□ -0.42
PRAMEF4-201ENST00000235349 BRPF3Q9ULD4 1205 aa12.46□□□□□ -0.42
PRAMEF4-201ENST00000235349 ITGA6P23229 1130 aa12.45□□□□□ -0.42
PRAMEF4-201ENST00000235349 NBPF5PQ86XG9 351 aaPredicted RBP12.45□□□□□ -0.42
PRAMEF4-201ENST00000235349 EAF2Q96CJ1 260 aaPredicted RBP12.45□□□□□ -0.42
PRAMEF4-201ENST00000235349 SEC31BQ9NQW1 1179 aa12.45□□□□□ -0.42
PRAMEF4-201ENST00000235349 RGPD3A6NKT7 1758 aaPredicted RBP12.45□□□□□ -0.42
PRAMEF4-201ENST00000235349 RGPD4Q7Z3J3 1758 aa12.45□□□□□ -0.42
PRAMEF4-201ENST00000235349 COL24A1Q17RW2 1714 aa12.44□□□□□ -0.42
PRAMEF4-201ENST00000235349 EYA2O00167 538 aa12.44□□□□□ -0.42
PRAMEF4-201ENST00000235349 GSPT1P15170 499 aaKnown RBP12.44□□□□□ -0.42
PRAMEF4-201ENST00000235349 TM4SF1P30408 202 aa12.44□□□□□ -0.42
PRAMEF4-201ENST00000235349 IFIT5Q13325 482 aaKnown RBP12.44□□□□□ -0.42
PRAMEF4-201ENST00000235349 ERC1Q8IUD2 1116 aa12.44□□□□□ -0.42
PRAMEF4-201ENST00000235349 PKNOX2Q96KN3 472 aa12.44□□□□□ -0.42
PRAMEF4-201ENST00000235349 CCDC8Q9H0W5 538 aaPredicted RBP12.44□□□□□ -0.42
PRAMEF4-201ENST00000235349 LAMB2P55268 1798 aa12.44□□□□□ -0.42
PRAMEF4-201ENST00000235349 GTF2E1P29083 439 aaPredicted RBP12.44□□□□□ -0.42
PRAMEF4-201ENST00000235349 SLC10A5Q5PT55 438 aa12.44□□□□□ -0.42
PRAMEF4-201ENST00000235349 TTC22Q5TAA0 569 aa12.44□□□□□ -0.42
PRAMEF4-201ENST00000235349 ABCC12Q96J65 1359 aa12.43□□□□□ -0.42
PRAMEF4-201ENST00000235349 PNPLA7Q6ZV29 1317 aa12.43□□□□□ -0.42
PRAMEF4-201ENST00000235349 ANKRD18BA2A2Z9 1011 aa12.43□□□□□ -0.42
PRAMEF4-201ENST00000235349 MX1P20591 662 aa12.43□□□□□ -0.42
PRAMEF4-201ENST00000235349 TPTE2Q6XPS3 522 aa12.43□□□□□ -0.42
PRAMEF4-201ENST00000235349 AACSQ86V21 672 aa12.43□□□□□ -0.42
PRAMEF4-201ENST00000235349 CLASRPQ8N2M8 674 aaKnown RBP12.43□□□□□ -0.42
PRAMEF4-201ENST00000235349 OSBPL3Q9H4L5 887 aa12.43□□□□□ -0.42
PRAMEF4-201ENST00000235349 TLR7Q9NYK1 1049 aaKnown RBP12.43□□□□□ -0.42
PRAMEF4-201ENST00000235349 STAP2Q9UGK3 403 aa12.43□□□□□ -0.42
PRAMEF4-201ENST00000235349 COL4A1P02462 1669 aa12.42□□□□□ -0.42
PRAMEF4-201ENST00000235349 SPEF2Q9C093 1822 aa12.42□□□□□ -0.42
PRAMEF4-201ENST00000235349 EIF5BO60841 1220 aaKnown RBP12.42□□□□□ -0.42
PRAMEF4-201ENST00000235349 SEC24BO95487 1268 aa12.42□□□□□ -0.42
PRAMEF4-201ENST00000235349 HMGB2P26583 209 aaKnown RBP12.42□□□□□ -0.42
PRAMEF4-201ENST00000235349 SF3B2Q13435 895 aaKnown RBP12.42□□□□□ -0.42
PRAMEF4-201ENST00000235349 BMP2KLQ5H9B9 411 aa12.42□□□□□ -0.42
PRAMEF4-201ENST00000235349 TAF7LQ5H9L4 462 aa12.42□□□□□ -0.42
PRAMEF4-201ENST00000235349 NYXQ9GZU5 481 aa12.42□□□□□ -0.42
PRAMEF4-201ENST00000235349 RIPOR2Q9Y4F9 1068 aa12.42□□□□□ -0.42
PRAMEF4-201ENST00000235349 IL15P40933 162 aaPredicted RBP12.41□□□□□ -0.42
PRAMEF4-201ENST00000235349 BAG6P46379 1132 aa12.41□□□□□ -0.42
PRAMEF4-201ENST00000235349 DDR1Q08345 913 aa12.41□□□□□ -0.42
PRAMEF4-201ENST00000235349 SLC15A2Q16348 729 aa12.41□□□□□ -0.42
PRAMEF4-201ENST00000235349 CIAO1O76071 339 aa12.41□□□□□ -0.42
PRAMEF4-201ENST00000235349 SERPINB2P05120 415 aa12.41□□□□□ -0.42
PRAMEF4-201ENST00000235349 IFIT2P09913 472 aaKnown RBP12.41□□□□□ -0.42
PRAMEF4-201ENST00000235349 TIMM10P62072 90 aa12.41□□□□□ -0.42
PRAMEF4-201ENST00000235349 SF3B3Q15393 1217 aaKnown RBP12.41□□□□□ -0.42
PRAMEF4-201ENST00000235349 CCDC152Q4G0S7 254 aa12.41□□□□□ -0.42
PRAMEF4-201ENST00000235349 TNNI3KQ59H18 835 aa12.41□□□□□ -0.42
PRAMEF4-201ENST00000235349 LDHAL6AQ6ZMR3 332 aa12.41□□□□□ -0.42
PRAMEF4-201ENST00000235349 FPGT-TNNI3KV9GXZ4 949 aa12.41□□□□□ -0.42
PRAMEF4-201ENST00000235349 MAP4K4O95819 1239 aaPredicted RBP12.4□□□□□ -0.42
PRAMEF4-201ENST00000235349 SDSP20132 328 aa12.4□□□□□ -0.42
PRAMEF4-201ENST00000235349 PRR5LQ6MZQ0 368 aa12.4□□□□□ -0.42
PRAMEF4-201ENST00000235349 PI4K2BQ8TCG2 481 aa12.4□□□□□ -0.42
PRAMEF4-201ENST00000235349 PDGFDQ9GZP0 370 aaPredicted RBP12.4□□□□□ -0.42
PRAMEF4-201ENST00000235349 CARMIL3Q8ND23 1372 aa12.4□□□□□ -0.42
PRAMEF4-201ENST00000235349 POLRMTO00411 1230 aaKnown RBP12.39□□□□□ -0.43
PRAMEF4-201ENST00000235349 HSP90B1P14625 803 aaKnown RBP12.39□□□□□ -0.43
PRAMEF4-201ENST00000235349 BECN1Q14457 450 aa12.39□□□□□ -0.43
PRAMEF4-201ENST00000235349 MSL1Q68DK7 614 aa12.39□□□□□ -0.43
PRAMEF4-201ENST00000235349 FLAD1Q8NFF5 587 aa12.39□□□□□ -0.43
PRAMEF4-201ENST00000235349 HELBQ8NG08 1087 aaPredicted RBP12.39□□□□□ -0.43
PRAMEF4-201ENST00000235349 CNNM1Q9NRU3 951 aa12.39□□□□□ -0.43
PRAMEF4-201ENST00000235349 CEP126Q9P2H0 1117 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms