RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 MAP3K2Q9Y2U5 619 aa14.36□□□□□ -0.11
SF3B6-201ENST00000233468 ZC3H4Q9UPT8 1303 aaKnown RBP14.36□□□□□ -0.11
SF3B6-201ENST00000233468 ARFGEF2Q9Y6D5 1785 aa14.35□□□□□ -0.11
SF3B6-201ENST00000233468 CCDC191Q8NCU4 936 aa14.35□□□□□ -0.11
SF3B6-201ENST00000233468 MYD88Q99836 296 aa14.35□□□□□ -0.11
SF3B6-201ENST00000233468 ISCA1Q9BUE6 129 aa14.35□□□□□ -0.11
SF3B6-201ENST00000233468 UBN2Q6ZU65 1347 aa14.35□□□□□ -0.11
SF3B6-201ENST00000233468 NTSR2O95665 410 aa14.34□□□□□ -0.11
SF3B6-201ENST00000233468 CD44P16070 742 aaKnown RBP14.34□□□□□ -0.11
SF3B6-201ENST00000233468 ERFEQ4G0M1 354 aa14.34□□□□□ -0.11
SF3B6-201ENST00000233468 NLRP3Q96P20 1036 aa14.34□□□□□ -0.11
SF3B6-201ENST00000233468 CWC25Q9NXE8 425 aaPredicted RBP14.34□□□□□ -0.11
SF3B6-201ENST00000233468 SH3TC1Q8TE82 1336 aa14.34□□□□□ -0.11
SF3B6-201ENST00000233468 ATP5J2-PTCD1G3V325 749 aa14.33□□□□□ -0.12
SF3B6-201ENST00000233468 SRGNP10124 158 aa14.33□□□□□ -0.12
SF3B6-201ENST00000233468 MNX1P50219 401 aaPredicted RBP14.33□□□□□ -0.12
SF3B6-201ENST00000233468 EVX2Q03828 476 aa14.33□□□□□ -0.12
SF3B6-201ENST00000233468 PRPF40BQ6NWY9 871 aaKnown RBP14.33□□□□□ -0.12
SF3B6-201ENST00000233468 G2E3Q7L622 706 aa14.33□□□□□ -0.12
SF3B6-201ENST00000233468 DNAAF4Q8WXU2 420 aa14.33□□□□□ -0.12
SF3B6-201ENST00000233468 CNKSR1Q969H4 720 aa14.33□□□□□ -0.12
SF3B6-201ENST00000233468 MASTLQ96GX5 879 aa14.33□□□□□ -0.12
SF3B6-201ENST00000233468 SMC4Q9NTJ3 1288 aa14.33□□□□□ -0.12
SF3B6-201ENST00000233468 PTPRCP08575 1304 aa14.33□□□□□ -0.12
SF3B6-201ENST00000233468 KLRG2A4D1S0 409 aaPredicted RBP14.32□□□□□ -0.12
SF3B6-201ENST00000233468 DDNO94850 711 aaPredicted RBP14.32□□□□□ -0.12
SF3B6-201ENST00000233468 POTEIP0CG38 1075 aa14.32□□□□□ -0.12
SF3B6-201ENST00000233468 POTEJP0CG39 1038 aa14.32□□□□□ -0.12
SF3B6-201ENST00000233468 NPR1P16066 1061 aa14.32□□□□□ -0.12
SF3B6-201ENST00000233468 ALDH1B1P30837 517 aa14.32□□□□□ -0.12
SF3B6-201ENST00000233468 SLC10A5Q5PT55 438 aa14.32□□□□□ -0.12
SF3B6-201ENST00000233468 STYK1Q6J9G0 422 aa14.32□□□□□ -0.12
SF3B6-201ENST00000233468 NUTM1Q86Y26 1132 aa14.32□□□□□ -0.12
SF3B6-201ENST00000233468 MRPL50Q8N5N7 158 aaKnown RBP14.32□□□□□ -0.12
SF3B6-201ENST00000233468 SP7Q8TDD2 431 aaPredicted RBP14.32□□□□□ -0.12
SF3B6-201ENST00000233468 SSH1Q8WYL5 1049 aa14.32□□□□□ -0.12
SF3B6-201ENST00000233468 DPY19L2Q6NUT2 758 aa14.31□□□□□ -0.12
SF3B6-201ENST00000233468 OLFM4Q6UX06 510 aa14.31□□□□□ -0.12
SF3B6-201ENST00000233468 ZBTB38Q8NAP3 1195 aaPredicted RBP14.31□□□□□ -0.12
SF3B6-201ENST00000233468 RPGRQ92834 1020 aaKnown RBP14.31□□□□□ -0.12
SF3B6-201ENST00000233468 NUP98P52948 1817 aa14.3□□□□□ -0.12
SF3B6-201ENST00000233468 BRPF1P55201 1214 aaPredicted RBP14.3□□□□□ -0.12
SF3B6-201ENST00000233468 SOGA3Q5TF21 947 aa14.3□□□□□ -0.12
SF3B6-201ENST00000233468 LINS1Q8NG48 757 aa14.3□□□□□ -0.12
SF3B6-201ENST00000233468 RBM17Q96I25 401 aaKnown RBP14.3□□□□□ -0.12
SF3B6-201ENST00000233468 TAOK3Q9H2K8 898 aa14.3□□□□□ -0.12
SF3B6-201ENST00000233468 RIC1Q4ADV7 1423 aa14.3□□□□□ -0.12
SF3B6-201ENST00000233468 IPO8O15397 1037 aaKnown RBP14.29□□□□□ -0.12
SF3B6-201ENST00000233468 PCCAP05165 728 aaPredicted RBP14.29□□□□□ -0.12
SF3B6-201ENST00000233468 C7orf43Q8WVR3 580 aa14.29□□□□□ -0.12
SF3B6-201ENST00000233468 TMX4Q9H1E5 349 aaPredicted RBP14.29□□□□□ -0.12
SF3B6-201ENST00000233468 KIF16BQ96L93 1317 aa14.29□□□□□ -0.12
SF3B6-201ENST00000233468 LTBP3Q9NS15 1303 aa14.29□□□□□ -0.12
SF3B6-201ENST00000233468 NEURL1BA8MQ27 555 aa14.28□□□□□ -0.12
SF3B6-201ENST00000233468 IRS4O14654 1257 aaPredicted RBP14.28□□□□□ -0.12
SF3B6-201ENST00000233468 VASPP50552 380 aaPredicted RBP14.28□□□□□ -0.12
SF3B6-201ENST00000233468 RARSP54136 660 aaKnown RBP14.28□□□□□ -0.12
SF3B6-201ENST00000233468 CRY2Q49AN0 593 aa14.28□□□□□ -0.12
SF3B6-201ENST00000233468 FAM89AQ96GI7 184 aa14.28□□□□□ -0.12
SF3B6-201ENST00000233468 API5Q9BZZ5 524 aaKnown RBP14.28□□□□□ -0.12
SF3B6-201ENST00000233468 ABCC12Q96J65 1359 aa14.27□□□□□ -0.12
SF3B6-201ENST00000233468 ALDH1L1O75891 902 aa14.27□□□□□ -0.13
SF3B6-201ENST00000233468 IGKV5-2P06315 115 aa14.27□□□□□ -0.13
SF3B6-201ENST00000233468 HOXA10P31260 410 aaPredicted RBP14.27□□□□□ -0.13
SF3B6-201ENST00000233468 SLC4A10Q6U841 1118 aa14.27□□□□□ -0.13
SF3B6-201ENST00000233468 DDX46Q7L014 1031 aaKnown RBP14.27□□□□□ -0.13
SF3B6-201ENST00000233468 BCL2L13Q9BXK5 485 aa14.27□□□□□ -0.13
SF3B6-201ENST00000233468 SRCIN1Q9C0H9 1055 aa14.27□□□□□ -0.13
SF3B6-201ENST00000233468 F6X3S4 739 aa14.26□□□□□ -0.13
SF3B6-201ENST00000233468 HSPA1AP0DMV8 641 aaKnown RBP14.26□□□□□ -0.13
SF3B6-201ENST00000233468 HSPA1BP0DMV9 641 aaKnown RBP14.26□□□□□ -0.13
SF3B6-201ENST00000233468 HCLS1P14317 486 aaPredicted RBP14.26□□□□□ -0.13
SF3B6-201ENST00000233468 GCKRQ14397 625 aa14.26□□□□□ -0.13
SF3B6-201ENST00000233468 GRIPAP1Q4V328 841 aa14.26□□□□□ -0.13
SF3B6-201ENST00000233468 BEND3Q5T5X7 828 aa14.26□□□□□ -0.13
SF3B6-201ENST00000233468 ARHGAP45Q92619 1136 aa14.26□□□□□ -0.13
SF3B6-201ENST00000233468 CRAMP1Q96RY5 1269 aa14.26□□□□□ -0.13
SF3B6-201ENST00000233468 ZNF277Q9NRM2 450 aaPredicted RBP14.26□□□□□ -0.13
SF3B6-201ENST00000233468 ZBTB47Q9UFB7 747 aaPredicted RBP14.26□□□□□ -0.13
SF3B6-201ENST00000233468 SCN4AP35499 1836 aa14.26□□□□□ -0.13
SF3B6-201ENST00000233468 CDHR2Q9BYE9 1310 aa14.25□□□□□ -0.13
SF3B6-201ENST00000233468 PDE8AO60658 829 aa14.25□□□□□ -0.13
SF3B6-201ENST00000233468 SF3B3Q15393 1217 aaKnown RBP14.25□□□□□ -0.13
SF3B6-201ENST00000233468 CWF19L2Q2TBE0 894 aaKnown RBP14.25□□□□□ -0.13
SF3B6-201ENST00000233468 RTL5Q5HYW3 569 aaPredicted RBP14.25□□□□□ -0.13
SF3B6-201ENST00000233468 CC2D2BQ6DHV5 1058 aa14.25□□□□□ -0.13
SF3B6-201ENST00000233468 SLC51AQ86UW1 340 aa14.25□□□□□ -0.13
SF3B6-201ENST00000233468 C9orf78Q9NZ63 289 aaPredicted RBP14.25□□□□□ -0.13
SF3B6-201ENST00000233468 NOB1Q9ULX3 412 aaKnown RBP14.25□□□□□ -0.13
SF3B6-201ENST00000233468 ZNF541Q9H0D2 1346 aa14.24□□□□□ -0.13
SF3B6-201ENST00000233468 H7C1W4 665 aa14.24□□□□□ -0.13
SF3B6-201ENST00000233468 BBOX1O75936 387 aa14.24□□□□□ -0.13
SF3B6-201ENST00000233468 CCDC152Q4G0S7 254 aa14.24□□□□□ -0.13
SF3B6-201ENST00000233468 CCDC93Q567U6 631 aa14.24□□□□□ -0.13
SF3B6-201ENST00000233468 TMC4Q7Z404 712 aa14.24□□□□□ -0.13
SF3B6-201ENST00000233468 TNS4Q8IZW8 715 aa14.24□□□□□ -0.13
SF3B6-201ENST00000233468 MKRN1Q9UHC7 482 aaKnown RBP14.24□□□□□ -0.13
SF3B6-201ENST00000233468 CCT4P50991 539 aaKnown RBP14.23□□□□□ -0.13
SF3B6-201ENST00000233468 FKBP4Q02790 459 aaKnown RBP eCLIP14.23□□□□□ -0.13
SF3B6-201ENST00000233468 UBE3BQ7Z3V4 1068 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms