RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 RPRD2Q5VT52 1461 aaKnown RBP9.37□□□□□ -0.91
APOB-201ENST00000233242 ESYT1Q9BSJ8 1104 aa9.36□□□□□ -0.91
APOB-201ENST00000233242 UBA7P41226 1012 aa9.36□□□□□ -0.91
APOB-201ENST00000233242 SPATS2Q86XZ4 545 aaKnown RBP9.36□□□□□ -0.91
APOB-201ENST00000233242 PPFIBP2Q8ND30 876 aa9.36□□□□□ -0.91
APOB-201ENST00000233242 PSMA7O14818 248 aa9.36□□□□□ -0.91
APOB-201ENST00000233242 TRIM47Q96LD4 638 aa9.36□□□□□ -0.91
APOB-201ENST00000233242 IMPACTQ9P2X3 320 aa9.36□□□□□ -0.91
APOB-201ENST00000233242 ACTN2P35609 894 aa9.36□□□□□ -0.91
APOB-201ENST00000233242 TRIM14Q14142 442 aa9.36□□□□□ -0.91
APOB-201ENST00000233242 TSNAXIP1Q2TAA8 658 aa9.36□□□□□ -0.91
APOB-201ENST00000233242 CFAP58Q5T655 872 aa9.36□□□□□ -0.91
APOB-201ENST00000233242 DNAJC25Q9H1X3 360 aa9.36□□□□□ -0.91
APOB-201ENST00000233242 HOMER2Q9NSB8 354 aa9.36□□□□□ -0.91
APOB-201ENST00000233242 AOPEPQ8N6M6 819 aa9.36□□□□□ -0.91
APOB-201ENST00000233242 IDH1O75874 414 aaKnown RBP9.36□□□□□ -0.91
APOB-201ENST00000233242 UTP14CQ5TAP6 766 aaKnown RBP9.36□□□□□ -0.91
APOB-201ENST00000233242 CCDC110Q8TBZ0 833 aa9.36□□□□□ -0.91
APOB-201ENST00000233242 MYCBPQ99417 103 aaPredicted RBP9.36□□□□□ -0.91
APOB-201ENST00000233242 ZNF213O14771 459 aa9.36□□□□□ -0.91
APOB-201ENST00000233242 ATP5DP30049 168 aa9.36□□□□□ -0.91
APOB-201ENST00000233242 MAP2K2P36507 400 aa9.36□□□□□ -0.91
APOB-201ENST00000233242 ZNF76P36508 570 aa9.36□□□□□ -0.91
APOB-201ENST00000233242 CEP128Q6ZU80 1094 aa9.36□□□□□ -0.91
APOB-201ENST00000233242 BRAPQ7Z569 592 aa9.36□□□□□ -0.91
APOB-201ENST00000233242 BOLA2Q9H3K6 86 aa9.36□□□□□ -0.91
APOB-201ENST00000233242 ELP1O95163 1332 aa9.36□□□□□ -0.91
APOB-201ENST00000233242 ATP2A1O14983 1001 aa9.36□□□□□ -0.91
APOB-201ENST00000233242 ATP11AP98196 1134 aa9.36□□□□□ -0.91
APOB-201ENST00000233242 TAF7Q15545 349 aaPredicted RBP9.36□□□□□ -0.91
APOB-201ENST00000233242 LUC7L2Q9Y383 392 aaKnown RBP9.36□□□□□ -0.91
APOB-201ENST00000233242 RTL1A6NKG5 1358 aa9.36□□□□□ -0.91
APOB-201ENST00000233242 GIGYF1O75420 1035 aaPredicted RBP9.36□□□□□ -0.91
APOB-201ENST00000233242 NCOA7Q8NI08 942 aa9.36□□□□□ -0.91
APOB-201ENST00000233242 EXOC1Q9NV70 894 aa9.36□□□□□ -0.91
APOB-201ENST00000233242 PPFIA1Q13136 1202 aa9.35□□□□□ -0.91
APOB-201ENST00000233242 GTF3C6Q969F1 213 aa9.35□□□□□ -0.91
APOB-201ENST00000233242 CHMP4BP1P59074 171 aa9.35□□□□□ -0.91
APOB-201ENST00000233242 SKAP1Q86WV1 359 aa9.35□□□□□ -0.91
APOB-201ENST00000233242 NUTM2AQ8IVF1 878 aaPredicted RBP9.35□□□□□ -0.91
APOB-201ENST00000233242 NEBLO76041 1014 aa9.35□□□□□ -0.91
APOB-201ENST00000233242 DNA2P51530 1060 aa9.35□□□□□ -0.91
APOB-201ENST00000233242 EVCP57679 992 aa9.35□□□□□ -0.91
APOB-201ENST00000233242 TBC1D5Q92609 795 aa9.35□□□□□ -0.91
APOB-201ENST00000233242 PPP1R14CQ8TAE6 165 aa9.35□□□□□ -0.91
APOB-201ENST00000233242 IQCGQ9H095 443 aaKnown RBP9.35□□□□□ -0.91
APOB-201ENST00000233242 CLNS1AP54105 237 aaKnown RBP9.35□□□□□ -0.91
APOB-201ENST00000233242 TRIM7Q9C029 511 aa9.35□□□□□ -0.91
APOB-201ENST00000233242 CABP4P57796 275 aa9.35□□□□□ -0.91
APOB-201ENST00000233242 PTPN23Q9H3S7 1636 aa9.35□□□□□ -0.91
APOB-201ENST00000233242 PRPF4BQ13523 1007 aaKnown RBP9.35□□□□□ -0.91
APOB-201ENST00000233242 KLHL34Q8N239 644 aa9.35□□□□□ -0.91
APOB-201ENST00000233242 TMX1Q9H3N1 280 aa9.35□□□□□ -0.91
APOB-201ENST00000233242 MTRF1LQ9UGC7 380 aaKnown RBP9.35□□□□□ -0.91
APOB-201ENST00000233242 BICDL2A1A5D9 508 aa9.35□□□□□ -0.91
APOB-201ENST00000233242 SYNJ1O43426 1573 aa9.35□□□□□ -0.91
APOB-201ENST00000233242 ATP2C2O75185 946 aa9.35□□□□□ -0.91
APOB-201ENST00000233242 TMTC2Q8N394 836 aa9.35□□□□□ -0.91
APOB-201ENST00000233242 CTNNA2P26232 953 aa9.35□□□□□ -0.91
APOB-201ENST00000233242 ZBTB16Q05516 673 aa9.35□□□□□ -0.91
APOB-201ENST00000233242 NOL3O60936 208 aaKnown RBP9.34□□□□□ -0.91
APOB-201ENST00000233242 NDUFAB1O14561 156 aa9.34□□□□□ -0.91
APOB-201ENST00000233242 CACNA2D3Q8IZS8 1091 aa9.34□□□□□ -0.91
APOB-201ENST00000233242 CCDC42Q96M95 316 aa9.34□□□□□ -0.91
APOB-201ENST00000233242 TTF2Q9UNY4 1162 aaKnown RBP9.34□□□□□ -0.91
APOB-201ENST00000233242 SCAF11Q99590 1463 aaKnown RBP9.34□□□□□ -0.91
APOB-201ENST00000233242 PIK3R4Q99570 1358 aa9.34□□□□□ -0.91
APOB-201ENST00000233242 FAM160A1Q05DH4 1040 aa9.34□□□□□ -0.91
APOB-201ENST00000233242 SYT10Q6XYQ8 523 aa9.34□□□□□ -0.91
APOB-201ENST00000233242 IFIT3O14879 490 aaKnown RBP9.34□□□□□ -0.91
APOB-201ENST00000233242 IGHMBP2P38935 993 aaKnown RBP9.34□□□□□ -0.91
APOB-201ENST00000233242 METAP2P50579 478 aaKnown RBP eCLIP9.34□□□□□ -0.91
APOB-201ENST00000233242 NAP1L3Q99457 506 aaPredicted RBP9.34□□□□□ -0.91
APOB-201ENST00000233242 GBP1P32455 592 aa9.34□□□□□ -0.91
APOB-201ENST00000233242 DNM1Q05193 864 aaKnown RBP9.34□□□□□ -0.91
APOB-201ENST00000233242 IFIT1P09914 478 aaKnown RBP9.34□□□□□ -0.91
APOB-201ENST00000233242 TSNARE1Q96NA8 513 aa9.34□□□□□ -0.91
APOB-201ENST00000233242 INSRP06213 1382 aa9.34□□□□□ -0.91
APOB-201ENST00000233242 TTC21BQ7Z4L5 1316 aa9.34□□□□□ -0.91
APOB-201ENST00000233242 SPTLC2O15270 562 aa9.34□□□□□ -0.91
APOB-201ENST00000233242 PDE1AP54750 535 aa9.34□□□□□ -0.91
APOB-201ENST00000233242 RRAGBQ5VZM2 374 aa9.34□□□□□ -0.91
APOB-201ENST00000233242 SPAG5Q96R06 1193 aa9.34□□□□□ -0.91
APOB-201ENST00000233242 DBF4Q9UBU7 674 aaPredicted RBP9.34□□□□□ -0.91
APOB-201ENST00000233242 RIOK3O14730 519 aaKnown RBP9.34□□□□□ -0.92
APOB-201ENST00000233242 PCDHB15Q9Y5E8 787 aa9.34□□□□□ -0.92
APOB-201ENST00000233242 MACROD2A1Z1Q3 448 aa9.33□□□□□ -0.92
APOB-201ENST00000233242 NBPF7P0C2Y1 421 aaPredicted RBP9.33□□□□□ -0.92
APOB-201ENST00000233242 GOLGA6CA6NDK9 693 aa9.33□□□□□ -0.92
APOB-201ENST00000233242 GOLGA6DP0CG33 693 aa9.33□□□□□ -0.92
APOB-201ENST00000233242 FLIIQ13045 1269 aa9.33□□□□□ -0.92
APOB-201ENST00000233242 AMOTQ4VCS5 1084 aa9.33□□□□□ -0.92
APOB-201ENST00000233242 RPGRIP1Q96KN7 1286 aa9.33□□□□□ -0.92
APOB-201ENST00000233242 GOLGA6AQ9NYA3 693 aa9.33□□□□□ -0.92
APOB-201ENST00000233242 ZEB2O60315 1214 aa9.33□□□□□ -0.92
APOB-201ENST00000233242 ANKRD44Q8N8A2 993 aa9.33□□□□□ -0.92
APOB-201ENST00000233242 ANAPC4Q9UJX5 808 aa9.33□□□□□ -0.92
APOB-201ENST00000233242 PARD3Q8TEW0 1356 aa9.33□□□□□ -0.92
APOB-201ENST00000233242 VCXQ9H320 206 aa9.33□□□□□ -0.92
APOB-201ENST00000233242 USH1CQ9Y6N9 552 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms