RNA–Protein interactions for RNA: ENST00000226317.9

CXCL6-201, Transcript of C-X-C motif chemokine ligand 6, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL6, Length 1,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL6-201ENST00000226317 CRAMP1Q96RY5 1269 aa20.33■□□□□ 0.84
CXCL6-201ENST00000226317 GNAI3P08754 354 aa20.32■□□□□ 0.84
CXCL6-201ENST00000226317 SUCLG2Q96I99 432 aa20.32■□□□□ 0.84
CXCL6-201ENST00000226317 CHMP3Q9Y3E7 222 aa20.32■□□□□ 0.84
CXCL6-201ENST00000226317 UTRNP46939 3433 aa20.31■□□□□ 0.84
CXCL6-201ENST00000226317 PDE3AQ14432 1141 aa20.31■□□□□ 0.84
CXCL6-201ENST00000226317 PRPF40BQ6NWY9 871 aaKnown RBP20.31■□□□□ 0.84
CXCL6-201ENST00000226317 MEIS3Q99687 375 aa20.31■□□□□ 0.84
CXCL6-201ENST00000226317 ZNF219Q9P2Y4 722 aaPredicted RBP20.31■□□□□ 0.84
CXCL6-201ENST00000226317 BBOX1O75936 387 aa20.3■□□□□ 0.84
CXCL6-201ENST00000226317 RRP1P56182 461 aaKnown RBP20.3■□□□□ 0.84
CXCL6-201ENST00000226317 FOXO4P98177 505 aa20.3■□□□□ 0.84
CXCL6-201ENST00000226317 LMBR1LQ6UX01 489 aa20.3■□□□□ 0.84
CXCL6-201ENST00000226317 KIF13BQ9NQT8 1826 aa20.3■□□□□ 0.84
CXCL6-201ENST00000226317 CSF1RP07333 972 aa20.3■□□□□ 0.84
CXCL6-201ENST00000226317 GRAPQ13588 217 aa20.3■□□□□ 0.84
CXCL6-201ENST00000226317 EPHA10Q5JZY3 1008 aa20.3■□□□□ 0.84
CXCL6-201ENST00000226317 GRAPLQ8TC17 118 aaPredicted RBP20.3■□□□□ 0.84
CXCL6-201ENST00000226317 TMX4Q9H1E5 349 aaPredicted RBP20.3■□□□□ 0.84
CXCL6-201ENST00000226317 GREM2Q9H772 168 aa20.3■□□□□ 0.84
CXCL6-201ENST00000226317 C21orf2O43822 256 aa20.29■□□□□ 0.84
CXCL6-201ENST00000226317 GRIN3BO60391 1043 aa20.29■□□□□ 0.84
CXCL6-201ENST00000226317 YBX3P16989 372 aaKnown RBP eCLIP20.29■□□□□ 0.84
CXCL6-201ENST00000226317 BICC1Q9H694 974 aaKnown RBP20.29■□□□□ 0.84
CXCL6-201ENST00000226317 SEC31BQ9NQW1 1179 aa20.29■□□□□ 0.84
CXCL6-201ENST00000226317 COG6Q9Y2V7 657 aa20.29■□□□□ 0.84
CXCL6-201ENST00000226317 C20orf194Q5TEA3 1177 aa20.28■□□□□ 0.84
CXCL6-201ENST00000226317 KAZALD1Q96I82 304 aa20.28■□□□□ 0.84
CXCL6-201ENST00000226317 PPEF1O14829 653 aaPredicted RBP20.27■□□□□ 0.84
CXCL6-201ENST00000226317 RPS8P62241 208 aaKnown RBP20.27■□□□□ 0.84
CXCL6-201ENST00000226317 IFIT5Q13325 482 aaKnown RBP20.27■□□□□ 0.84
CXCL6-201ENST00000226317 MVPQ14764 893 aaKnown RBP20.27■□□□□ 0.84
CXCL6-201ENST00000226317 CCDC57Q2TAC2 916 aa20.27■□□□□ 0.84
CXCL6-201ENST00000226317 CELF1Q92879 486 aaKnown RBP20.27■□□□□ 0.84
CXCL6-201ENST00000226317 CDC5LQ99459 802 aaKnown RBP20.27■□□□□ 0.84
CXCL6-201ENST00000226317 ANKRD31Q8N7Z5 1873 aa20.27■□□□□ 0.84
CXCL6-201ENST00000226317 ZBTB7BO15156 539 aaPredicted RBP20.27■□□□□ 0.83
CXCL6-201ENST00000226317 GNAI2P04899 355 aa20.27■□□□□ 0.83
CXCL6-201ENST00000226317 ITGA6P23229 1130 aa20.27■□□□□ 0.83
CXCL6-201ENST00000226317 FAM161AQ3B820 660 aa20.27■□□□□ 0.83
CXCL6-201ENST00000226317 SUPT16HQ9Y5B9 1047 aaKnown RBP20.27■□□□□ 0.83
CXCL6-201ENST00000226317 LRRFIP2Q9Y608 721 aaKnown RBP20.27■□□□□ 0.83
CXCL6-201ENST00000226317 N4BP2Q86UW6 1770 aaPredicted RBP20.26■□□□□ 0.83
CXCL6-201ENST00000226317 ANKRD18BA2A2Z9 1011 aa20.26■□□□□ 0.83
CXCL6-201ENST00000226317 ARHGAP27Q6ZUM4 889 aa20.26■□□□□ 0.83
CXCL6-201ENST00000226317 ANKRD18AQ8IVF6 992 aa20.26■□□□□ 0.83
CXCL6-201ENST00000226317 CHMP4BQ9H444 224 aaKnown RBP20.26■□□□□ 0.83
CXCL6-201ENST00000226317 DDX19BQ9UMR2 479 aa20.26■□□□□ 0.83
CXCL6-201ENST00000226317 TNRC6CQ9HCJ0 1690 aaKnown RBP20.25■□□□□ 0.83
CXCL6-201ENST00000226317 CENPBP07199 599 aaPredicted RBP20.25■□□□□ 0.83
CXCL6-201ENST00000226317 SOGA3Q5TF21 947 aa20.25■□□□□ 0.83
CXCL6-201ENST00000226317 IGHMBP2P38935 993 aaKnown RBP20.24■□□□□ 0.83
CXCL6-201ENST00000226317 TAF7LQ5H9L4 462 aa20.24■□□□□ 0.83
CXCL6-201ENST00000226317 RABL6Q3YEC7 729 aaPredicted RBP20.24■□□□□ 0.83
CXCL6-201ENST00000226317 TMC4Q7Z404 712 aa20.24■□□□□ 0.83
CXCL6-201ENST00000226317 ANKRD44Q8N8A2 993 aa20.24■□□□□ 0.83
CXCL6-201ENST00000226317 C7orf43Q8WVR3 580 aa20.24■□□□□ 0.83
CXCL6-201ENST00000226317 ATP6V0A2Q9Y487 856 aa20.24■□□□□ 0.83
CXCL6-201ENST00000226317 RTL9Q8NET4 1388 aa20.23■□□□□ 0.83
CXCL6-201ENST00000226317 CC2D2BQ6DHV5 1058 aa20.23■□□□□ 0.83
CXCL6-201ENST00000226317 SP8Q8IXZ3 490 aa20.23■□□□□ 0.83
CXCL6-201ENST00000226317 MPHOSPH8Q99549 860 aa20.23■□□□□ 0.83
CXCL6-201ENST00000226317 CCDC93Q567U6 631 aa20.22■□□□□ 0.83
CXCL6-201ENST00000226317 OLFM4Q6UX06 510 aa20.22■□□□□ 0.83
CXCL6-201ENST00000226317 RTKN2Q8IZC4 609 aa20.22■□□□□ 0.83
CXCL6-201ENST00000226317 KIAA1551Q9HCM1 1747 aa20.21■□□□□ 0.83
CXCL6-201ENST00000226317 DDX60Q8IY21 1712 aaKnown RBP20.21■□□□□ 0.83
CXCL6-201ENST00000226317 BSDC1Q9NW68 430 aaPredicted RBP20.21■□□□□ 0.83
CXCL6-201ENST00000226317 GRIPAP1Q4V328 841 aa20.2■□□□□ 0.82
CXCL6-201ENST00000226317 C1orf115Q9H7X2 142 aa20.2■□□□□ 0.82
CXCL6-201ENST00000226317 COL11A2P13942 1736 aaPredicted RBP20.2■□□□□ 0.82
CXCL6-201ENST00000226317 LDHAL6AQ6ZMR3 332 aa20.19■□□□□ 0.82
CXCL6-201ENST00000226317 ZNF594Q96JF6 807 aaPredicted RBP20.19■□□□□ 0.82
CXCL6-201ENST00000226317 SRGAP3O43295 1099 aa20.19■□□□□ 0.82
CXCL6-201ENST00000226317 NSFL1CQ9UNZ2 370 aaKnown RBP20.19■□□□□ 0.82
CXCL6-201ENST00000226317 MPNDQ8N594 471 aa20.18■□□□□ 0.82
CXCL6-201ENST00000226317 CNNM1Q9NRU3 951 aa20.18■□□□□ 0.82
CXCL6-201ENST00000226317 ZBTB40Q9NUA8 1239 aa20.18■□□□□ 0.82
CXCL6-201ENST00000226317 ANKIB1Q9P2G1 1089 aa20.18■□□□□ 0.82
CXCL6-201ENST00000226317 DPP8Q6V1X1 898 aaPredicted RBP20.17■□□□□ 0.82
CXCL6-201ENST00000226317 SLC51AQ86UW1 340 aa20.16■□□□□ 0.82
CXCL6-201ENST00000226317 TAOK3Q9H2K8 898 aa20.16■□□□□ 0.82
CXCL6-201ENST00000226317 KLHDC4Q8TBB5 520 aa20.16■□□□□ 0.82
CXCL6-201ENST00000226317 MINPP1Q9UNW1 487 aa20.16■□□□□ 0.82
CXCL6-201ENST00000226317 SLX4Q8IY92 1834 aa20.15■□□□□ 0.82
CXCL6-201ENST00000226317 ATP8B2P98198 1209 aa20.15■□□□□ 0.82
CXCL6-201ENST00000226317 FKBP4Q02790 459 aaKnown RBP eCLIP20.15■□□□□ 0.82
CXCL6-201ENST00000226317 MTX1Q13505 466 aa20.15■□□□□ 0.82
CXCL6-201ENST00000226317 CRBNQ96SW2 442 aa20.15■□□□□ 0.82
CXCL6-201ENST00000226317 LAMB2P55268 1798 aa20.15■□□□□ 0.82
CXCL6-201ENST00000226317 DLEC1Q9Y238 1755 aa20.14■□□□□ 0.82
CXCL6-201ENST00000226317 NFKBIEO00221 500 aa20.14■□□□□ 0.81
CXCL6-201ENST00000226317 GPSM2P81274 684 aa20.14■□□□□ 0.81
CXCL6-201ENST00000226317 RASSF7Q02833 373 aa20.14■□□□□ 0.81
CXCL6-201ENST00000226317 PTPN12Q05209 780 aaKnown RBP20.14■□□□□ 0.81
CXCL6-201ENST00000226317 RFX5P48382 616 aaPredicted RBP20.13■□□□□ 0.81
CXCL6-201ENST00000226317 SUPT20HQ8NEM7 779 aa20.13■□□□□ 0.81
CXCL6-201ENST00000226317 PSMD1Q99460 953 aa20.13■□□□□ 0.81
CXCL6-201ENST00000226317 ANKRD2Q9GZV1 360 aa20.13■□□□□ 0.81
CXCL6-201ENST00000226317 PNMA6EA0A0J9YXQ4 647 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms