RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 HELBQ8NG08 1087 aaPredicted RBP14.14□□□□□ -0.15
TNFAIP1-201ENST00000226225 IBTKQ9P2D0 1353 aaPredicted RBP14.14□□□□□ -0.15
TNFAIP1-201ENST00000226225 GSPT1P15170 499 aaKnown RBP14.14□□□□□ -0.15
TNFAIP1-201ENST00000226225 TIMM10P62072 90 aa14.14□□□□□ -0.15
TNFAIP1-201ENST00000226225 METTL24Q5JXM2 366 aa14.14□□□□□ -0.15
TNFAIP1-201ENST00000226225 SH3TC1Q8TE82 1336 aa14.14□□□□□ -0.15
TNFAIP1-201ENST00000226225 SUSD4Q5VX71 490 aa14.14□□□□□ -0.15
TNFAIP1-201ENST00000226225 ISCA1Q9BUE6 129 aa14.14□□□□□ -0.15
TNFAIP1-201ENST00000226225 ANKRD18BA2A2Z9 1011 aa14.13□□□□□ -0.15
TNFAIP1-201ENST00000226225 LRRC24Q50LG9 513 aa14.13□□□□□ -0.15
TNFAIP1-201ENST00000226225 PUS3Q9BZE2 481 aaKnown RBP14.13□□□□□ -0.15
TNFAIP1-201ENST00000226225 ANO2Q9NQ90 1003 aa14.13□□□□□ -0.15
TNFAIP1-201ENST00000226225 ITGA6P23229 1130 aa14.13□□□□□ -0.15
TNFAIP1-201ENST00000226225 GOLGA6L22H0YM25 854 aa14.13□□□□□ -0.15
TNFAIP1-201ENST00000226225 PCCAP05165 728 aaPredicted RBP14.13□□□□□ -0.15
TNFAIP1-201ENST00000226225 KCNJ4P48050 445 aa14.13□□□□□ -0.15
TNFAIP1-201ENST00000226225 SCN11AQ9UI33 1791 aa14.12□□□□□ -0.15
TNFAIP1-201ENST00000226225 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.12□□□□□ -0.15
TNFAIP1-201ENST00000226225 PTPN12Q05209 780 aaKnown RBP14.12□□□□□ -0.15
TNFAIP1-201ENST00000226225 EAF2Q96CJ1 260 aaPredicted RBP14.12□□□□□ -0.15
TNFAIP1-201ENST00000226225 GREM2Q9H772 168 aa14.12□□□□□ -0.15
TNFAIP1-201ENST00000226225 DIAPH3Q9NSV4 1193 aa14.12□□□□□ -0.15
TNFAIP1-201ENST00000226225 NDUFB9Q9Y6M9 179 aa14.12□□□□□ -0.15
TNFAIP1-201ENST00000226225 SF3B2Q13435 895 aaKnown RBP14.12□□□□□ -0.15
TNFAIP1-201ENST00000226225 ECHDC1Q9NTX5 307 aa14.12□□□□□ -0.15
TNFAIP1-201ENST00000226225 MRC1P22897 1456 aa14.12□□□□□ -0.15
TNFAIP1-201ENST00000226225 ERVV-1B6SEH8 477 aa14.11□□□□□ -0.15
TNFAIP1-201ENST00000226225 SASH1O94885 1247 aa14.11□□□□□ -0.15
TNFAIP1-201ENST00000226225 PRDM10Q9NQV6 1147 aa14.11□□□□□ -0.15
TNFAIP1-201ENST00000226225 COL15A1P39059 1388 aa14.11□□□□□ -0.15
TNFAIP1-201ENST00000226225 ARHGEF1Q92888 912 aaKnown RBP14.11□□□□□ -0.15
TNFAIP1-201ENST00000226225 COL22A1Q8NFW1 1626 aaPredicted RBP14.11□□□□□ -0.15
TNFAIP1-201ENST00000226225 CNTROBQ8N137 903 aa14.11□□□□□ -0.15
TNFAIP1-201ENST00000226225 RNF214Q8ND24 703 aa14.11□□□□□ -0.15
TNFAIP1-201ENST00000226225 FSD1Q9BTV5 496 aa14.11□□□□□ -0.15
TNFAIP1-201ENST00000226225 RPS6KA4O75676 772 aa14.1□□□□□ -0.15
TNFAIP1-201ENST00000226225 FKBP4Q02790 459 aaKnown RBP eCLIP14.1□□□□□ -0.15
TNFAIP1-201ENST00000226225 MTX1Q13505 466 aa14.1□□□□□ -0.15
TNFAIP1-201ENST00000226225 CWC27Q6UX04 472 aaKnown RBP14.1□□□□□ -0.15
TNFAIP1-201ENST00000226225 TLR7Q9NYK1 1049 aaKnown RBP14.1□□□□□ -0.15
TNFAIP1-201ENST00000226225 PLCH1Q4KWH8 1693 aa14.1□□□□□ -0.15
TNFAIP1-201ENST00000226225 PDE8AO60658 829 aa14.1□□□□□ -0.15
TNFAIP1-201ENST00000226225 GLRX3O76003 335 aaKnown RBP14.1□□□□□ -0.15
TNFAIP1-201ENST00000226225 CAMTA2O94983 1202 aa14.1□□□□□ -0.15
TNFAIP1-201ENST00000226225 FOXO4P98177 505 aa14.1□□□□□ -0.15
TNFAIP1-201ENST00000226225 SNRKQ9NRH2 765 aa14.1□□□□□ -0.15
TNFAIP1-201ENST00000226225 RBM27Q9P2N5 1060 aaKnown RBP14.1□□□□□ -0.15
TNFAIP1-201ENST00000226225 PXDNLA1KZ92 1463 aa14.1□□□□□ -0.15
TNFAIP1-201ENST00000226225 PKD1L3Q7Z443 1732 aa14.1□□□□□ -0.15
TNFAIP1-201ENST00000226225 KDM3BQ7LBC6 1761 aa14.1□□□□□ -0.15
TNFAIP1-201ENST00000226225 EYA2O00167 538 aa14.09□□□□□ -0.15
TNFAIP1-201ENST00000226225 CTSWP56202 376 aa14.09□□□□□ -0.15
TNFAIP1-201ENST00000226225 PARP10Q53GL7 1025 aa14.09□□□□□ -0.15
TNFAIP1-201ENST00000226225 NOL8Q76FK4 1167 aaKnown RBP14.09□□□□□ -0.15
TNFAIP1-201ENST00000226225 DBNDD2Q9BQY9 259 aa14.09□□□□□ -0.15
TNFAIP1-201ENST00000226225 TXNRD1Q16881 649 aa14.09□□□□□ -0.15
TNFAIP1-201ENST00000226225 UBN2Q6ZU65 1347 aa14.09□□□□□ -0.15
TNFAIP1-201ENST00000226225 KCPQ6ZWJ8 1503 aa14.09□□□□□ -0.15
TNFAIP1-201ENST00000226225 IGHMBP2P38935 993 aaKnown RBP14.09□□□□□ -0.15
TNFAIP1-201ENST00000226225 IL15P40933 162 aaPredicted RBP14.09□□□□□ -0.15
TNFAIP1-201ENST00000226225 TBC1D9BQ66K14 1250 aa14.09□□□□□ -0.15
TNFAIP1-201ENST00000226225 COPRSQ9NQ92 184 aa14.09□□□□□ -0.15
TNFAIP1-201ENST00000226225 SEC31BQ9NQW1 1179 aa14.09□□□□□ -0.15
TNFAIP1-201ENST00000226225 LRRC4BQ9NT99 713 aa14.09□□□□□ -0.15
TNFAIP1-201ENST00000226225 HSP90B1P14625 803 aaKnown RBP14.08□□□□□ -0.15
TNFAIP1-201ENST00000226225 PKP1Q13835 747 aa14.08□□□□□ -0.15
TNFAIP1-201ENST00000226225 TPTE2Q6XPS3 522 aa14.08□□□□□ -0.15
TNFAIP1-201ENST00000226225 TRIM28Q13263 835 aaKnown RBP14.08□□□□□ -0.16
TNFAIP1-201ENST00000226225 CCDC152Q4G0S7 254 aa14.08□□□□□ -0.16
TNFAIP1-201ENST00000226225 TTLL11Q8NHH1 800 aa14.08□□□□□ -0.16
TNFAIP1-201ENST00000226225 EDC3Q96F86 508 aaKnown RBP14.08□□□□□ -0.16
TNFAIP1-201ENST00000226225 UTYO14607 1347 aa14.08□□□□□ -0.16
TNFAIP1-201ENST00000226225 ERFEQ4G0M1 354 aa14.08□□□□□ -0.16
TNFAIP1-201ENST00000226225 TNNI3KQ59H18 835 aa14.08□□□□□ -0.16
TNFAIP1-201ENST00000226225 POTEAQ6S8J7 498 aa14.08□□□□□ -0.16
TNFAIP1-201ENST00000226225 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.08□□□□□ -0.16
TNFAIP1-201ENST00000226225 FPGT-TNNI3KV9GXZ4 949 aa14.08□□□□□ -0.16
TNFAIP1-201ENST00000226225 TAF5LO75529 589 aa14.07□□□□□ -0.16
TNFAIP1-201ENST00000226225 RAB3GAP1Q15042 981 aa14.07□□□□□ -0.16
TNFAIP1-201ENST00000226225 ZSCAN30Q86W11 494 aa14.07□□□□□ -0.16
TNFAIP1-201ENST00000226225 NLRP3Q96P20 1036 aa14.07□□□□□ -0.16
TNFAIP1-201ENST00000226225 EP400Q96L91 3159 aa14.07□□□□□ -0.16
TNFAIP1-201ENST00000226225 REC8O95072 547 aa14.07□□□□□ -0.16
TNFAIP1-201ENST00000226225 TTC39AQ5SRH9 613 aa14.07□□□□□ -0.16
TNFAIP1-201ENST00000226225 K7ELQ4 463 aaPredicted RBP14.07□□□□□ -0.16
TNFAIP1-201ENST00000226225 ONECUT3O60422 494 aaPredicted RBP14.07□□□□□ -0.16
TNFAIP1-201ENST00000226225 PRPF40AO75400 957 aaKnown RBP14.07□□□□□ -0.16
TNFAIP1-201ENST00000226225 TPM2P07951 284 aa14.07□□□□□ -0.16
TNFAIP1-201ENST00000226225 CCDC158Q5M9N0 1113 aa14.07□□□□□ -0.16
TNFAIP1-201ENST00000226225 FBXO41Q8TF61 875 aa14.07□□□□□ -0.16
TNFAIP1-201ENST00000226225 SNAP23O00161 211 aa14.06□□□□□ -0.16
TNFAIP1-201ENST00000226225 CASP7P55210 303 aa14.06□□□□□ -0.16
TNFAIP1-201ENST00000226225 MSL1Q68DK7 614 aa14.06□□□□□ -0.16
TNFAIP1-201ENST00000226225 DDX46Q7L014 1031 aaKnown RBP14.06□□□□□ -0.16
TNFAIP1-201ENST00000226225 ZNF34Q8IZ26 560 aa14.06□□□□□ -0.16
TNFAIP1-201ENST00000226225 A0A0U1RQG5 324 aaPredicted RBP14.06□□□□□ -0.16
TNFAIP1-201ENST00000226225 A0A1B0GUL7 405 aa14.06□□□□□ -0.16
TNFAIP1-201ENST00000226225 CCDC173Q0VFZ6 552 aa14.06□□□□□ -0.16
TNFAIP1-201ENST00000226225 DNTTIP2Q5QJE6 756 aaKnown RBP14.06□□□□□ -0.16
TNFAIP1-201ENST00000226225 VPS37DQ86XT2 251 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms