RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 GOLGA6L4A6NEF3 574 aa14.69□□□□□ -0.06
NUP88-201ENST00000225696 TPM3P06753 285 aa14.69□□□□□ -0.06
NUP88-201ENST00000225696 KCNA6P17658 529 aa14.69□□□□□ -0.06
NUP88-201ENST00000225696 CEBPZQ03701 1054 aaKnown RBP14.69□□□□□ -0.06
NUP88-201ENST00000225696 FTOQ9C0B1 505 aaKnown RBP eCLIP14.69□□□□□ -0.06
NUP88-201ENST00000225696 SNRKQ9NRH2 765 aa14.69□□□□□ -0.06
NUP88-201ENST00000225696 SLIT1O75093 1534 aa14.69□□□□□ -0.06
NUP88-201ENST00000225696 KDM3BQ7LBC6 1761 aa14.69□□□□□ -0.06
NUP88-201ENST00000225696 PSMA5P28066 241 aa14.68□□□□□ -0.06
NUP88-201ENST00000225696 ZNF165P49910 485 aa14.68□□□□□ -0.06
NUP88-201ENST00000225696 CHAF1AQ13111 956 aaPredicted RBP14.68□□□□□ -0.06
NUP88-201ENST00000225696 IP6K1Q92551 441 aa14.68□□□□□ -0.06
NUP88-201ENST00000225696 LRRC2Q9BYS8 371 aa14.68□□□□□ -0.06
NUP88-201ENST00000225696 EID1Q9Y6B2 187 aa14.68□□□□□ -0.06
NUP88-201ENST00000225696 NPHP3Q7Z494 1330 aa14.68□□□□□ -0.06
NUP88-201ENST00000225696 MED23Q9ULK4 1368 aa14.68□□□□□ -0.06
NUP88-201ENST00000225696 ARHGAP23Q9P227 1491 aa14.68□□□□□ -0.06
NUP88-201ENST00000225696 GRM8O00222 908 aa14.68□□□□□ -0.06
NUP88-201ENST00000225696 PPFIA3O75145 1194 aa14.68□□□□□ -0.06
NUP88-201ENST00000225696 TAF5LO75529 589 aa14.68□□□□□ -0.06
NUP88-201ENST00000225696 ALDH1L1O75891 902 aa14.68□□□□□ -0.06
NUP88-201ENST00000225696 EPHA10Q5JZY3 1008 aa14.68□□□□□ -0.06
NUP88-201ENST00000225696 CCDC129Q6ZRS4 1044 aa14.68□□□□□ -0.06
NUP88-201ENST00000225696 ERC1Q8IUD2 1116 aa14.68□□□□□ -0.06
NUP88-201ENST00000225696 SCAND2PQ9GZW5 306 aaPredicted RBP14.68□□□□□ -0.06
NUP88-201ENST00000225696 TBX22Q9Y458 520 aa14.68□□□□□ -0.06
NUP88-201ENST00000225696 PXDNQ92626 1479 aa14.67□□□□□ -0.06
NUP88-201ENST00000225696 PDCP20941 246 aa14.67□□□□□ -0.06
NUP88-201ENST00000225696 FOSBP53539 338 aa14.67□□□□□ -0.06
NUP88-201ENST00000225696 G3BP1Q13283 466 aaKnown RBP eCLIP14.67□□□□□ -0.06
NUP88-201ENST00000225696 TDRD7Q8NHU6 1098 aaKnown RBP14.67□□□□□ -0.06
NUP88-201ENST00000225696 BICD2Q8TD16 824 aa14.67□□□□□ -0.06
NUP88-201ENST00000225696 BRF1Q92994 677 aa14.67□□□□□ -0.06
NUP88-201ENST00000225696 SEC62Q99442 399 aaKnown RBP14.67□□□□□ -0.06
NUP88-201ENST00000225696 USP27XA6NNY8 438 aa14.67□□□□□ -0.06
NUP88-201ENST00000225696 IGKV5-2P06315 115 aa14.67□□□□□ -0.06
NUP88-201ENST00000225696 UTP14CQ5TAP6 766 aaKnown RBP14.67□□□□□ -0.06
NUP88-201ENST00000225696 C11orf57Q6ZUT1 292 aaPredicted RBP14.67□□□□□ -0.06
NUP88-201ENST00000225696 KLHL34Q8N239 644 aa14.67□□□□□ -0.06
NUP88-201ENST00000225696 USP16Q9Y5T5 823 aa14.67□□□□□ -0.06
NUP88-201ENST00000225696 RGPD2P0DJD1 1756 aa14.67□□□□□ -0.06
NUP88-201ENST00000225696 CHD2O14647 1828 aaKnown RBP14.66□□□□□ -0.06
NUP88-201ENST00000225696 RESTQ13127 1097 aa14.66□□□□□ -0.06
NUP88-201ENST00000225696 THEMISQ8N1K5 641 aaPredicted RBP14.66□□□□□ -0.06
NUP88-201ENST00000225696 DDX19AQ9NUU7 478 aaKnown RBP14.66□□□□□ -0.06
NUP88-201ENST00000225696 CLIP2Q9UDT6 1046 aa14.66□□□□□ -0.06
NUP88-201ENST00000225696 RNMTO43148 476 aaKnown RBP14.66□□□□□ -0.06
NUP88-201ENST00000225696 TNNT1P13805 278 aa14.66□□□□□ -0.06
NUP88-201ENST00000225696 SLFNL1Q499Z3 407 aa14.66□□□□□ -0.06
NUP88-201ENST00000225696 AKAP4Q5JQC9 854 aa14.66□□□□□ -0.06
NUP88-201ENST00000225696 ERCC4Q92889 916 aaPredicted RBP14.66□□□□□ -0.06
NUP88-201ENST00000225696 LTN1O94822 1766 aa14.65□□□□□ -0.06
NUP88-201ENST00000225696 ZNF142P52746 1687 aaPredicted RBP14.65□□□□□ -0.06
NUP88-201ENST00000225696 PDIA6Q15084 440 aa14.65□□□□□ -0.06
NUP88-201ENST00000225696 LINS1Q8NG48 757 aa14.65□□□□□ -0.06
NUP88-201ENST00000225696 GTF3C6Q969F1 213 aa14.65□□□□□ -0.06
NUP88-201ENST00000225696 ADD1P35611 737 aaKnown RBP14.64□□□□□ -0.07
NUP88-201ENST00000225696 IQCB1Q15051 598 aa14.64□□□□□ -0.07
NUP88-201ENST00000225696 ANKRD1Q15327 319 aa14.64□□□□□ -0.07
NUP88-201ENST00000225696 RNF20Q5VTR2 975 aa14.64□□□□□ -0.07
NUP88-201ENST00000225696 Q6ZUG5 572 aa14.64□□□□□ -0.07
NUP88-201ENST00000225696 HIP1O00291 1037 aa14.64□□□□□ -0.07
NUP88-201ENST00000225696 ALDH8A1Q9H2A2 487 aaPredicted RBP14.64□□□□□ -0.07
NUP88-201ENST00000225696 GOLPH3LQ9H4A5 285 aa14.64□□□□□ -0.07
NUP88-201ENST00000225696 DBNLQ9UJU6 430 aaKnown RBP14.64□□□□□ -0.07
NUP88-201ENST00000225696 JCADQ9P266 1359 aa14.63□□□□□ -0.07
NUP88-201ENST00000225696 UTYO14607 1347 aa14.63□□□□□ -0.07
NUP88-201ENST00000225696 SCRN1Q12765 414 aa14.63□□□□□ -0.07
NUP88-201ENST00000225696 TSGA10IPQ3SY00 556 aa14.63□□□□□ -0.07
NUP88-201ENST00000225696 HEG1Q9ULI3 1381 aa14.63□□□□□ -0.07
NUP88-201ENST00000225696 A0A0G2JLW4 131 aa14.63□□□□□ -0.07
NUP88-201ENST00000225696 CYP21A2P08686 494 aa14.63□□□□□ -0.07
NUP88-201ENST00000225696 PIP4K2AP48426 406 aaPredicted RBP14.63□□□□□ -0.07
NUP88-201ENST00000225696 USPL1Q5W0Q7 1092 aa14.63□□□□□ -0.07
NUP88-201ENST00000225696 STOX1Q6ZVD7 989 aa14.63□□□□□ -0.07
NUP88-201ENST00000225696 ZNF592Q92610 1267 aa14.63□□□□□ -0.07
NUP88-201ENST00000225696 CCDC9Q9Y3X0 531 aaKnown RBP14.63□□□□□ -0.07
NUP88-201ENST00000225696 SMTNL1A8MU46 457 aa14.62□□□□□ -0.07
NUP88-201ENST00000225696 MYL6BP14649 208 aa14.62□□□□□ -0.07
NUP88-201ENST00000225696 SLC39A6Q13433 755 aa14.62□□□□□ -0.07
NUP88-201ENST00000225696 TPD52L1Q16890 204 aaPredicted RBP14.62□□□□□ -0.07
NUP88-201ENST00000225696 NEK1Q96PY6 1258 aa14.62□□□□□ -0.07
NUP88-201ENST00000225696 CTNNA3Q9UI47 895 aa14.62□□□□□ -0.07
NUP88-201ENST00000225696 ADGRL3Q9HAR2 1447 aa14.62□□□□□ -0.07
NUP88-201ENST00000225696 LRRC8AQ8IWT6 810 aa14.61□□□□□ -0.07
NUP88-201ENST00000225696 FBXW7Q969H0 707 aa14.61□□□□□ -0.07
NUP88-201ENST00000225696 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.61□□□□□ -0.07
NUP88-201ENST00000225696 V9GYY5 206 aaPredicted RBP14.61□□□□□ -0.07
NUP88-201ENST00000225696 ZNF609O15014 1411 aa14.61□□□□□ -0.07
NUP88-201ENST00000225696 H3BQV1 296 aa14.61□□□□□ -0.07
NUP88-201ENST00000225696 CTDNEP1O95476 244 aa14.61□□□□□ -0.07
NUP88-201ENST00000225696 HSP90B1P14625 803 aaKnown RBP14.61□□□□□ -0.07
NUP88-201ENST00000225696 SNW1Q13573 536 aaKnown RBP14.61□□□□□ -0.07
NUP88-201ENST00000225696 PLEKHO1Q53GL0 409 aaPredicted RBP14.61□□□□□ -0.07
NUP88-201ENST00000225696 IFFO2Q5TF58 517 aa14.61□□□□□ -0.07
NUP88-201ENST00000225696 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.61□□□□□ -0.07
NUP88-201ENST00000225696 PHF8Q9UPP1 1060 aa14.61□□□□□ -0.07
NUP88-201ENST00000225696 NFAT5O94916 1531 aa14.61□□□□□ -0.07
NUP88-201ENST00000225696 TFCP2Q12800 502 aa14.6□□□□□ -0.07
NUP88-201ENST00000225696 DNAJC2Q99543 621 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms