RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 TMC4Q7Z404 712 aa23.19■■□□□ 1.3
PFN1-201ENST00000225655 NIM1KQ8IY84 436 aa23.19■■□□□ 1.3
PFN1-201ENST00000225655 ZNF428Q96B54 188 aa23.19■■□□□ 1.3
PFN1-201ENST00000225655 PHAXQ9H814 394 aaKnown RBP23.19■■□□□ 1.3
PFN1-201ENST00000225655 LRRC37AA6NMS7 1700 aa23.19■■□□□ 1.3
PFN1-201ENST00000225655 PASKQ96RG2 1323 aa23.18■■□□□ 1.3
PFN1-201ENST00000225655 DPP8Q6V1X1 898 aaPredicted RBP23.18■■□□□ 1.3
PFN1-201ENST00000225655 RIC3Q7Z5B4 369 aa23.18■■□□□ 1.3
PFN1-201ENST00000225655 CREBZFQ9NS37 354 aa23.18■■□□□ 1.3
PFN1-201ENST00000225655 GJA3Q9Y6H8 435 aa23.18■■□□□ 1.3
PFN1-201ENST00000225655 SF3B3Q15393 1217 aaKnown RBP23.17■■□□□ 1.3
PFN1-201ENST00000225655 AOC3Q16853 763 aa23.17■■□□□ 1.3
PFN1-201ENST00000225655 CCDC30Q5VVM6 783 aa23.17■■□□□ 1.3
PFN1-201ENST00000225655 MPNDQ8N594 471 aa23.17■■□□□ 1.3
PFN1-201ENST00000225655 LTBP1Q14766 1721 aa23.16■■□□□ 1.3
PFN1-201ENST00000225655 ITGBL1O95965 494 aaPredicted RBP23.15■■□□□ 1.3
PFN1-201ENST00000225655 IFFO2Q5TF58 517 aa23.15■■□□□ 1.3
PFN1-201ENST00000225655 WWC1Q8IX03 1113 aa23.15■■□□□ 1.3
PFN1-201ENST00000225655 ZNRF3Q9ULT6 936 aa23.15■■□□□ 1.3
PFN1-201ENST00000225655 CLEC11AQ9Y240 323 aa23.15■■□□□ 1.3
PFN1-201ENST00000225655 IRS4O14654 1257 aaPredicted RBP23.14■■□□□ 1.29
PFN1-201ENST00000225655 LMOD1P29536 600 aaPredicted RBP23.14■■□□□ 1.29
PFN1-201ENST00000225655 SCNN1DP51172 638 aa23.14■■□□□ 1.29
PFN1-201ENST00000225655 KIAA2012Q0VF49 1180 aa23.14■■□□□ 1.29
PFN1-201ENST00000225655 TSPYL6Q8N831 410 aa23.14■■□□□ 1.29
PFN1-201ENST00000225655 ZBTB38Q8NAP3 1195 aaPredicted RBP23.14■■□□□ 1.29
PFN1-201ENST00000225655 SALL2Q9Y467 1007 aaPredicted RBP23.14■■□□□ 1.29
PFN1-201ENST00000225655 DUOX1Q9NRD9 1551 aa23.14■■□□□ 1.29
PFN1-201ENST00000225655 RTL5Q5HYW3 569 aaPredicted RBP23.13■■□□□ 1.29
PFN1-201ENST00000225655 CCDC191Q8NCU4 936 aa23.13■■□□□ 1.29
PFN1-201ENST00000225655 TSR2Q969E8 191 aaKnown RBP23.13■■□□□ 1.29
PFN1-201ENST00000225655 DDX58O95786 925 aaKnown RBP23.12■■□□□ 1.29
PFN1-201ENST00000225655 HSP90B1P14625 803 aaKnown RBP23.12■■□□□ 1.29
PFN1-201ENST00000225655 MYD88Q99836 296 aa23.12■■□□□ 1.29
PFN1-201ENST00000225655 IL16Q14005 1332 aa23.11■■□□□ 1.29
PFN1-201ENST00000225655 EPS15P42566 896 aa23.11■■□□□ 1.29
PFN1-201ENST00000225655 CELF1Q92879 486 aaKnown RBP23.11■■□□□ 1.29
PFN1-201ENST00000225655 METTL22Q9BUU2 404 aaPredicted RBP23.11■■□□□ 1.29
PFN1-201ENST00000225655 COL4A1P02462 1669 aa23.1■■□□□ 1.29
PFN1-201ENST00000225655 CXCL9Q07325 125 aa23.1■■□□□ 1.29
PFN1-201ENST00000225655 MAP1SQ66K74 1059 aaPredicted RBP23.1■■□□□ 1.29
PFN1-201ENST00000225655 WDR63Q8IWG1 891 aa23.1■■□□□ 1.29
PFN1-201ENST00000225655 CNTROBQ8N137 903 aa23.1■■□□□ 1.29
PFN1-201ENST00000225655 PCCAP05165 728 aaPredicted RBP23.09■■□□□ 1.29
PFN1-201ENST00000225655 HNRNPUQ00839 825 aaKnown RBP eCLIP23.09■■□□□ 1.29
PFN1-201ENST00000225655 CWC25Q9NXE8 425 aaPredicted RBP23.09■■□□□ 1.29
PFN1-201ENST00000225655 TMEM88BA6NKF7 163 aa23.08■■□□□ 1.29
PFN1-201ENST00000225655 USP50Q70EL3 339 aaPredicted RBP23.08■■□□□ 1.29
PFN1-201ENST00000225655 STK31Q9BXU1 1019 aa23.08■■□□□ 1.29
PFN1-201ENST00000225655 GPRC5DQ9NZD1 345 aa23.08■■□□□ 1.29
PFN1-201ENST00000225655 RPS8P62241 208 aaKnown RBP23.07■■□□□ 1.28
PFN1-201ENST00000225655 TWISTNBQ3B726 338 aaPredicted RBP23.07■■□□□ 1.28
PFN1-201ENST00000225655 KSR2Q6VAB6 950 aa23.07■■□□□ 1.28
PFN1-201ENST00000225655 MKRN1Q9UHC7 482 aaKnown RBP23.07■■□□□ 1.28
PFN1-201ENST00000225655 NSFL1CQ9UNZ2 370 aaKnown RBP23.07■■□□□ 1.28
PFN1-201ENST00000225655 MAP3K2Q9Y2U5 619 aa23.07■■□□□ 1.28
PFN1-201ENST00000225655 CDHR2Q9BYE9 1310 aa23.07■■□□□ 1.28
PFN1-201ENST00000225655 CNTNAP1P78357 1384 aa23.06■■□□□ 1.28
PFN1-201ENST00000225655 TNIP1Q15025 636 aa23.06■■□□□ 1.28
PFN1-201ENST00000225655 CIAPIN1Q6FI81 312 aa23.06■■□□□ 1.28
PFN1-201ENST00000225655 ADARB2Q9NS39 739 aaKnown RBP23.06■■□□□ 1.28
PFN1-201ENST00000225655 PI4KAP2A4QPH2 592 aa23.05■■□□□ 1.28
PFN1-201ENST00000225655 PDE8AO60658 829 aa23.05■■□□□ 1.28
PFN1-201ENST00000225655 GMPSP49915 693 aaPredicted RBP23.05■■□□□ 1.28
PFN1-201ENST00000225655 GPSM2P81274 684 aa23.05■■□□□ 1.28
PFN1-201ENST00000225655 WASHC4Q2M389 1173 aa23.05■■□□□ 1.28
PFN1-201ENST00000225655 PI4KAP1Q8N8J0 262 aa23.05■■□□□ 1.28
PFN1-201ENST00000225655 CCDC152Q4G0S7 254 aa23.04■■□□□ 1.28
PFN1-201ENST00000225655 MYH16Q9H6N6 1097 aa23.04■■□□□ 1.28
PFN1-201ENST00000225655 PCNTO95613 3336 aa23.03■■□□□ 1.28
PFN1-201ENST00000225655 YDJCA8MPS7 323 aa23.03■■□□□ 1.28
PFN1-201ENST00000225655 RAD17O75943 681 aa23.03■■□□□ 1.28
PFN1-201ENST00000225655 HSPA1AP0DMV8 641 aaKnown RBP23.03■■□□□ 1.28
PFN1-201ENST00000225655 HSPA1BP0DMV9 641 aaKnown RBP23.03■■□□□ 1.28
PFN1-201ENST00000225655 SEC31BQ9NQW1 1179 aa23.03■■□□□ 1.28
PFN1-201ENST00000225655 POLLQ9UGP5 575 aa23.03■■□□□ 1.28
PFN1-201ENST00000225655 CACNA1FO60840 1977 aa23.03■■□□□ 1.28
PFN1-201ENST00000225655 C6orf229H3BNL8 230 aa23.02■■□□□ 1.28
PFN1-201ENST00000225655 IGKV5-2P06315 115 aa23.02■■□□□ 1.28
PFN1-201ENST00000225655 NEXNQ0ZGT2 675 aa23.02■■□□□ 1.28
PFN1-201ENST00000225655 JARID2Q92833 1246 aaPredicted RBP23.02■■□□□ 1.28
PFN1-201ENST00000225655 FANCIQ9NVI1 1328 aa23.02■■□□□ 1.28
PFN1-201ENST00000225655 SLC4A2P04920 1241 aa23.01■■□□□ 1.27
PFN1-201ENST00000225655 TBC1D16Q8TBP0 767 aa23.01■■□□□ 1.27
PFN1-201ENST00000225655 EYA3Q99504 573 aa23.01■■□□□ 1.27
PFN1-201ENST00000225655 BCL2L13Q9BXK5 485 aa23.01■■□□□ 1.27
PFN1-201ENST00000225655 PODXL2Q9NZ53 605 aa23.01■■□□□ 1.27
PFN1-201ENST00000225655 MYH3P11055 1940 aa23■■□□□ 1.27
PFN1-201ENST00000225655 G2E3Q7L622 706 aa23■■□□□ 1.27
PFN1-201ENST00000225655 TRPM7Q96QT4 1865 aa23■■□□□ 1.27
PFN1-201ENST00000225655 RASSF10A6NK89 507 aa22.99■■□□□ 1.27
PFN1-201ENST00000225655 RIMBP2O15034 1052 aa22.99■■□□□ 1.27
PFN1-201ENST00000225655 COL13A1Q5TAT6 717 aaPredicted RBP22.99■■□□□ 1.27
PFN1-201ENST00000225655 DBNDD1Q9H9R9 158 aa22.99■■□□□ 1.27
PFN1-201ENST00000225655 ZNF521Q96K83 1311 aa22.99■■□□□ 1.27
PFN1-201ENST00000225655 E9PSI1 815 aa22.98■■□□□ 1.27
PFN1-201ENST00000225655 VEGFBP49765 207 aa22.98■■□□□ 1.27
PFN1-201ENST00000225655 CTSWP56202 376 aa22.98■■□□□ 1.27
PFN1-201ENST00000225655 PGAP2Q9UHJ9 254 aa22.98■■□□□ 1.27
PFN1-201ENST00000225655 NEURL1BA8MQ27 555 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms