RNA–Protein interactions for RNA: ENST00000222305.7

USF2-201, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF2, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-201ENST00000222305 SMC5Q8IY18 1101 aa28.6■■■□□ 2.17
USF2-201ENST00000222305 DCTPP1Q9H773 170 aa28.6■■■□□ 2.17
USF2-201ENST00000222305 ANKRD31Q8N7Z5 1873 aa28.6■■■□□ 2.17
USF2-201ENST00000222305 FAM161AQ3B820 660 aa28.59■■■□□ 2.17
USF2-201ENST00000222305 PA2G4Q9UQ80 394 aaKnown RBP28.59■■■□□ 2.17
USF2-201ENST00000222305 EXOC6BQ9Y2D4 811 aa28.59■■■□□ 2.17
USF2-201ENST00000222305 KLHDC4Q8TBB5 520 aa28.58■■■□□ 2.17
USF2-201ENST00000222305 GCC1Q96CN9 775 aa28.58■■■□□ 2.17
USF2-201ENST00000222305 HSP90B1P14625 803 aaKnown RBP28.58■■■□□ 2.17
USF2-201ENST00000222305 RFX5P48382 616 aaPredicted RBP28.58■■■□□ 2.17
USF2-201ENST00000222305 SLC10A5Q5PT55 438 aa28.58■■■□□ 2.17
USF2-201ENST00000222305 C3orf67Q6ZVT6 689 aa28.58■■■□□ 2.17
USF2-201ENST00000222305 GREM2Q9H772 168 aa28.57■■■□□ 2.16
USF2-201ENST00000222305 SOCS7O14512 581 aa28.56■■■□□ 2.16
USF2-201ENST00000222305 ZBTB7AO95365 584 aa28.56■■■□□ 2.16
USF2-201ENST00000222305 PARP3Q9Y6F1 533 aa28.56■■■□□ 2.16
USF2-201ENST00000222305 APBB1O00213 710 aa28.55■■■□□ 2.16
USF2-201ENST00000222305 SURF6O75683 361 aaKnown RBP28.55■■■□□ 2.16
USF2-201ENST00000222305 ST5P78524 1137 aa28.54■■■□□ 2.16
USF2-201ENST00000222305 PTPN12Q05209 780 aaKnown RBP28.54■■■□□ 2.16
USF2-201ENST00000222305 SLC16A10Q8TF71 515 aa28.54■■■□□ 2.16
USF2-201ENST00000222305 CCDC57Q2TAC2 916 aa28.54■■■□□ 2.16
USF2-201ENST00000222305 SKAP1Q86WV1 359 aa28.54■■■□□ 2.16
USF2-201ENST00000222305 SIL1Q9H173 461 aa28.54■■■□□ 2.16
USF2-201ENST00000222305 COL4A1P02462 1669 aa28.53■■■□□ 2.16
USF2-201ENST00000222305 ITGA6P23229 1130 aa28.53■■■□□ 2.16
USF2-201ENST00000222305 ZNF594Q96JF6 807 aaPredicted RBP28.53■■■□□ 2.16
USF2-201ENST00000222305 PDZRN3Q9UPQ7 1066 aa28.53■■■□□ 2.16
USF2-201ENST00000222305 RIC1Q4ADV7 1423 aa28.52■■■□□ 2.16
USF2-201ENST00000222305 IFIT5Q13325 482 aaKnown RBP28.52■■■□□ 2.16
USF2-201ENST00000222305 CCDC152Q4G0S7 254 aa28.52■■■□□ 2.16
USF2-201ENST00000222305 NLRP3Q96P20 1036 aa28.52■■■□□ 2.16
USF2-201ENST00000222305 ANKRD45Q5TZF3 282 aa28.51■■■□□ 2.15
USF2-201ENST00000222305 COPRSQ9NQ92 184 aa28.51■■■□□ 2.15
USF2-201ENST00000222305 ATF5Q9Y2D1 282 aaPredicted RBP28.51■■■□□ 2.15
USF2-201ENST00000222305 NOP58Q9Y2X3 529 aaKnown RBP28.51■■■□□ 2.15
USF2-201ENST00000222305 SF3B3Q15393 1217 aaKnown RBP28.51■■■□□ 2.15
USF2-201ENST00000222305 ANKRD18BA2A2Z9 1011 aa28.5■■■□□ 2.15
USF2-201ENST00000222305 SEC31BQ9NQW1 1179 aa28.5■■■□□ 2.15
USF2-201ENST00000222305 OS9Q13438 667 aaPredicted RBP28.49■■■□□ 2.15
USF2-201ENST00000222305 LRP5O75197 1615 aa28.48■■■□□ 2.15
USF2-201ENST00000222305 RTL9Q8NET4 1388 aa28.48■■■□□ 2.15
USF2-201ENST00000222305 NUCB1Q02818 461 aa28.48■■■□□ 2.15
USF2-201ENST00000222305 TAF7LQ5H9L4 462 aa28.48■■■□□ 2.15
USF2-201ENST00000222305 BCL11AQ9H165 835 aa28.48■■■□□ 2.15
USF2-201ENST00000222305 COL11A2P13942 1736 aaPredicted RBP28.48■■■□□ 2.15
USF2-201ENST00000222305 SMARCA5O60264 1052 aaPredicted RBP28.47■■■□□ 2.15
USF2-201ENST00000222305 G3BP1Q13283 466 aaKnown RBP eCLIP28.47■■■□□ 2.15
USF2-201ENST00000222305 LNPKQ9C0E8 428 aa28.47■■■□□ 2.15
USF2-201ENST00000222305 MTFR1LQ9H019 292 aa28.47■■■□□ 2.15
USF2-201ENST00000222305 HSP90AB4PQ58FF6 505 aa28.46■■■□□ 2.15
USF2-201ENST00000222305 CHD1LQ86WJ1 897 aa28.46■■■□□ 2.15
USF2-201ENST00000222305 RAB11FIP3O75154 756 aa28.45■■■□□ 2.14
USF2-201ENST00000222305 LRRC24Q50LG9 513 aa28.45■■■□□ 2.14
USF2-201ENST00000222305 PUS3Q9BZE2 481 aaKnown RBP28.45■■■□□ 2.14
USF2-201ENST00000222305 LRRCC1Q9C099 1032 aa28.45■■■□□ 2.14
USF2-201ENST00000222305 CACNA1SQ13698 1873 aa28.45■■■□□ 2.14
USF2-201ENST00000222305 SASH1O94885 1247 aa28.43■■■□□ 2.14
USF2-201ENST00000222305 RHPN1Q8TCX5 695 aa28.43■■■□□ 2.14
USF2-201ENST00000222305 A0A1B0GUL6 1792 aa28.43■■■□□ 2.14
USF2-201ENST00000222305 EYA2O00167 538 aa28.43■■■□□ 2.14
USF2-201ENST00000222305 ATG9AQ7Z3C6 839 aa28.43■■■□□ 2.14
USF2-201ENST00000222305 KIF1BPQ96EK5 621 aa28.43■■■□□ 2.14
USF2-201ENST00000222305 BRIP1Q9BX63 1249 aa28.43■■■□□ 2.14
USF2-201ENST00000222305 ERC1Q8IUD2 1116 aa28.42■■■□□ 2.14
USF2-201ENST00000222305 IL1RAPL2Q9NP60 686 aa28.42■■■□□ 2.14
USF2-201ENST00000222305 ZBTB47Q9UFB7 747 aaPredicted RBP28.42■■■□□ 2.14
USF2-201ENST00000222305 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.42■■■□□ 2.14
USF2-201ENST00000222305 PDE4AP27815 886 aa28.41■■■□□ 2.14
USF2-201ENST00000222305 CRY2Q49AN0 593 aa28.41■■■□□ 2.14
USF2-201ENST00000222305 LDHAL6AQ6ZMR3 332 aa28.41■■■□□ 2.14
USF2-201ENST00000222305 KIF13BQ9NQT8 1826 aa28.41■■■□□ 2.14
USF2-201ENST00000222305 CDC5LQ99459 802 aaKnown RBP28.4■■■□□ 2.14
USF2-201ENST00000222305 CIAO1O76071 339 aa28.4■■■□□ 2.14
USF2-201ENST00000222305 RGS3P49796 1198 aa28.4■■■□□ 2.14
USF2-201ENST00000222305 DDX46Q7L014 1031 aaKnown RBP28.4■■■□□ 2.14
USF2-201ENST00000222305 RPGRQ92834 1020 aaKnown RBP28.4■■■□□ 2.14
USF2-201ENST00000222305 CELF1Q92879 486 aaKnown RBP28.4■■■□□ 2.14
USF2-201ENST00000222305 KLRG2A4D1S0 409 aaPredicted RBP28.39■■■□□ 2.13
USF2-201ENST00000222305 IGHMBP2P38935 993 aaKnown RBP28.39■■■□□ 2.13
USF2-201ENST00000222305 CNNM1Q9NRU3 951 aa28.39■■■□□ 2.13
USF2-201ENST00000222305 IL15P40933 162 aaPredicted RBP28.38■■■□□ 2.13
USF2-201ENST00000222305 TFCP2Q12800 502 aa28.38■■■□□ 2.13
USF2-201ENST00000222305 ANKRD18AQ8IVF6 992 aa28.38■■■□□ 2.13
USF2-201ENST00000222305 C16orf71Q8IYS4 520 aaPredicted RBP28.38■■■□□ 2.13
USF2-201ENST00000222305 MPHOSPH8Q99549 860 aa28.38■■■□□ 2.13
USF2-201ENST00000222305 FBXO3Q9UK99 471 aa28.38■■■□□ 2.13
USF2-201ENST00000222305 POLD1P28340 1107 aa28.37■■■□□ 2.13
USF2-201ENST00000222305 PDE6BP35913 854 aa28.37■■■□□ 2.13
USF2-201ENST00000222305 C10orf71Q711Q0 1435 aa28.37■■■□□ 2.13
USF2-201ENST00000222305 RIPOR2Q9Y4F9 1068 aa28.36■■■□□ 2.13
USF2-201ENST00000222305 DLEC1Q9Y238 1755 aa28.35■■■□□ 2.13
USF2-201ENST00000222305 OTUD7AQ8TE49 926 aaPredicted RBP28.35■■■□□ 2.13
USF2-201ENST00000222305 PTGER2P43116 358 aa28.34■■■□□ 2.13
USF2-201ENST00000222305 RBM17Q96I25 401 aaKnown RBP28.34■■■□□ 2.13
USF2-201ENST00000222305 SGIP1Q9BQI5 828 aa28.34■■■□□ 2.13
USF2-201ENST00000222305 SRGNP10124 158 aa28.33■■■□□ 2.13
USF2-201ENST00000222305 RPS8P62241 208 aaKnown RBP28.33■■■□□ 2.13
USF2-201ENST00000222305 GRAPQ13588 217 aa28.33■■■□□ 2.13
USF2-201ENST00000222305 GRAPLQ8TC17 118 aaPredicted RBP28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms