RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 BRPF1P55201 1214 aaPredicted RBP17.34■□□□□ 0.37
UPK1A-201ENST00000222275 FLIIQ13045 1269 aa17.34■□□□□ 0.37
UPK1A-201ENST00000222275 CC2D2BQ6DHV5 1058 aa17.34■□□□□ 0.37
UPK1A-201ENST00000222275 SSH1Q8WYL5 1049 aa17.34■□□□□ 0.37
UPK1A-201ENST00000222275 MYD88Q99836 296 aa17.34■□□□□ 0.37
UPK1A-201ENST00000222275 PTPRCP08575 1304 aa17.33■□□□□ 0.36
UPK1A-201ENST00000222275 RNF123Q5XPI4 1314 aa17.33■□□□□ 0.36
UPK1A-201ENST00000222275 APLP1P51693 650 aa17.33■□□□□ 0.36
UPK1A-201ENST00000222275 RARSP54136 660 aaKnown RBP17.33■□□□□ 0.36
UPK1A-201ENST00000222275 FKBP5Q13451 457 aaPredicted RBP17.33■□□□□ 0.36
UPK1A-201ENST00000222275 SF3B3Q15393 1217 aaKnown RBP17.33■□□□□ 0.36
UPK1A-201ENST00000222275 KSR2Q6VAB6 950 aa17.33■□□□□ 0.36
UPK1A-201ENST00000222275 MRPL50Q8N5N7 158 aaKnown RBP17.33■□□□□ 0.36
UPK1A-201ENST00000222275 CELF1Q92879 486 aaKnown RBP17.33■□□□□ 0.36
UPK1A-201ENST00000222275 WDR90Q96KV7 1748 aa17.33■□□□□ 0.36
UPK1A-201ENST00000222275 KIF16BQ96L93 1317 aa17.32■□□□□ 0.36
UPK1A-201ENST00000222275 BBOX1O75936 387 aa17.32■□□□□ 0.36
UPK1A-201ENST00000222275 IGKV5-2P06315 115 aa17.32■□□□□ 0.36
UPK1A-201ENST00000222275 SP8Q8IXZ3 490 aa17.32■□□□□ 0.36
UPK1A-201ENST00000222275 SMC1BQ8NDV3 1235 aa17.32■□□□□ 0.36
UPK1A-201ENST00000222275 L3MBTL3Q96JM7 780 aaPredicted RBP17.32■□□□□ 0.36
UPK1A-201ENST00000222275 METTL22Q9BUU2 404 aaPredicted RBP17.32■□□□□ 0.36
UPK1A-201ENST00000222275 ANKRD36CQ5JPF3 1778 aa17.32■□□□□ 0.36
UPK1A-201ENST00000222275 PI4KAP2A4QPH2 592 aa17.31■□□□□ 0.36
UPK1A-201ENST00000222275 IRS4O14654 1257 aaPredicted RBP17.31■□□□□ 0.36
UPK1A-201ENST00000222275 IPO8O15397 1037 aaKnown RBP17.31■□□□□ 0.36
UPK1A-201ENST00000222275 NEXNQ0ZGT2 675 aa17.31■□□□□ 0.36
UPK1A-201ENST00000222275 GRAPQ13588 217 aa17.31■□□□□ 0.36
UPK1A-201ENST00000222275 PI4KAP1Q8N8J0 262 aa17.31■□□□□ 0.36
UPK1A-201ENST00000222275 GRAPLQ8TC17 118 aaPredicted RBP17.31■□□□□ 0.36
UPK1A-201ENST00000222275 RTFDC1Q9BY42 306 aaPredicted RBP17.31■□□□□ 0.36
UPK1A-201ENST00000222275 TAF1DQ9H5J8 278 aaPredicted RBP17.31■□□□□ 0.36
UPK1A-201ENST00000222275 SEC31BQ9NQW1 1179 aa17.31■□□□□ 0.36
UPK1A-201ENST00000222275 MAP3K2Q9Y2U5 619 aa17.31■□□□□ 0.36
UPK1A-201ENST00000222275 LAMB2P55268 1798 aa17.3■□□□□ 0.36
UPK1A-201ENST00000222275 AOC3Q16853 763 aa17.3■□□□□ 0.36
UPK1A-201ENST00000222275 DDX46Q7L014 1031 aaKnown RBP17.3■□□□□ 0.36
UPK1A-201ENST00000222275 ZBTB38Q8NAP3 1195 aaPredicted RBP17.3■□□□□ 0.36
UPK1A-201ENST00000222275 LARGE2Q8N3Y3 721 aa17.29■□□□□ 0.36
UPK1A-201ENST00000222275 ARHGAP45Q92619 1136 aa17.29■□□□□ 0.36
UPK1A-201ENST00000222275 API5Q9BZZ5 524 aaKnown RBP17.29■□□□□ 0.36
UPK1A-201ENST00000222275 MPNDQ8N594 471 aa17.28■□□□□ 0.36
UPK1A-201ENST00000222275 CCDC191Q8NCU4 936 aa17.28■□□□□ 0.36
UPK1A-201ENST00000222275 BCL2L13Q9BXK5 485 aa17.28■□□□□ 0.36
UPK1A-201ENST00000222275 RCAN3Q9UKA8 241 aa17.28■□□□□ 0.36
UPK1A-201ENST00000222275 DDX60Q8IY21 1712 aaKnown RBP17.27■□□□□ 0.36
UPK1A-201ENST00000222275 PCCAP05165 728 aaPredicted RBP17.27■□□□□ 0.36
UPK1A-201ENST00000222275 CWF19L2Q2TBE0 894 aaKnown RBP17.27■□□□□ 0.36
UPK1A-201ENST00000222275 DNAAF4Q8WXU2 420 aa17.27■□□□□ 0.36
UPK1A-201ENST00000222275 CCDC85AQ96PX6 553 aaPredicted RBP17.27■□□□□ 0.36
UPK1A-201ENST00000222275 GJA3Q9Y6H8 435 aa17.27■□□□□ 0.36
UPK1A-201ENST00000222275 WTIPA6NIX2 430 aaPredicted RBP17.26■□□□□ 0.35
UPK1A-201ENST00000222275 PPIP5K2O43314 1243 aa17.26■□□□□ 0.35
UPK1A-201ENST00000222275 EPS15P42566 896 aa17.26■□□□□ 0.35
UPK1A-201ENST00000222275 GPSM2P81274 684 aa17.26■□□□□ 0.35
UPK1A-201ENST00000222275 CXCL9Q07325 125 aa17.26■□□□□ 0.35
UPK1A-201ENST00000222275 GRIPAP1Q4V328 841 aa17.26■□□□□ 0.35
UPK1A-201ENST00000222275 CHADLQ6NUI6 762 aa17.26■□□□□ 0.35
UPK1A-201ENST00000222275 DPP8Q6V1X1 898 aaPredicted RBP17.26■□□□□ 0.35
UPK1A-201ENST00000222275 GPC2Q8N158 579 aa17.26■□□□□ 0.35
UPK1A-201ENST00000222275 JDP2Q8WYK2 163 aa17.26■□□□□ 0.35
UPK1A-201ENST00000222275 GPR101Q96P66 508 aaPredicted RBP17.26■□□□□ 0.35
UPK1A-201ENST00000222275 CWC25Q9NXE8 425 aaPredicted RBP17.26■□□□□ 0.35
UPK1A-201ENST00000222275 POLLQ9UGP5 575 aa17.26■□□□□ 0.35
UPK1A-201ENST00000222275 YDJCA8MPS7 323 aa17.25■□□□□ 0.35
UPK1A-201ENST00000222275 ITGBL1O95965 494 aaPredicted RBP17.25■□□□□ 0.35
UPK1A-201ENST00000222275 MS4A1P11836 297 aa17.25■□□□□ 0.35
UPK1A-201ENST00000222275 EPHX2P34913 555 aa17.25■□□□□ 0.35
UPK1A-201ENST00000222275 SCNN1DP51172 638 aa17.25■□□□□ 0.35
UPK1A-201ENST00000222275 RPS8P62241 208 aaKnown RBP17.25■□□□□ 0.35
UPK1A-201ENST00000222275 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.25■□□□□ 0.35
UPK1A-201ENST00000222275 KCNQ5Q9NR82 932 aa17.25■□□□□ 0.35
UPK1A-201ENST00000222275 HACL1Q9UJ83 578 aa17.25■□□□□ 0.35
UPK1A-201ENST00000222275 NOB1Q9ULX3 412 aaKnown RBP17.25■□□□□ 0.35
UPK1A-201ENST00000222275 HSP90B1P14625 803 aaKnown RBP17.24■□□□□ 0.35
UPK1A-201ENST00000222275 ZKSCAN2Q63HK3 967 aa17.24■□□□□ 0.35
UPK1A-201ENST00000222275 LINS1Q8NG48 757 aa17.24■□□□□ 0.35
UPK1A-201ENST00000222275 NEURL1BA8MQ27 555 aa17.23■□□□□ 0.35
UPK1A-201ENST00000222275 H7C1W4 665 aa17.23■□□□□ 0.35
UPK1A-201ENST00000222275 BCAR3O75815 825 aa17.23■□□□□ 0.35
UPK1A-201ENST00000222275 EIF6P56537 245 aaKnown RBP17.23■□□□□ 0.35
UPK1A-201ENST00000222275 FMR1Q06787 632 aaKnown RBP eCLIP17.23■□□□□ 0.35
UPK1A-201ENST00000222275 KIAA2012Q0VF49 1180 aa17.23■□□□□ 0.35
UPK1A-201ENST00000222275 EAPPQ56P03 285 aaPredicted RBP17.23■□□□□ 0.35
UPK1A-201ENST00000222275 KLRG1Q96E93 195 aa17.23■□□□□ 0.35
UPK1A-201ENST00000222275 LTBP1Q14766 1721 aa17.23■□□□□ 0.35
UPK1A-201ENST00000222275 DUOX1Q9NRD9 1551 aa17.23■□□□□ 0.35
UPK1A-201ENST00000222275 SHTN1A0MZ66 631 aa17.22■□□□□ 0.35
UPK1A-201ENST00000222275 IQCA1LA6NCM1 817 aa17.22■□□□□ 0.35
UPK1A-201ENST00000222275 PDE8AO60658 829 aa17.22■□□□□ 0.35
UPK1A-201ENST00000222275 ALDH1L1O75891 902 aa17.22■□□□□ 0.35
UPK1A-201ENST00000222275 RAD17O75943 681 aa17.22■□□□□ 0.35
UPK1A-201ENST00000222275 CASP7P55210 303 aa17.22■□□□□ 0.35
UPK1A-201ENST00000222275 ATF7IPQ6VMQ6 1270 aa17.22■□□□□ 0.35
UPK1A-201ENST00000222275 LDHDQ86WU2 507 aa17.22■□□□□ 0.35
UPK1A-201ENST00000222275 NIM1KQ8IY84 436 aa17.22■□□□□ 0.35
UPK1A-201ENST00000222275 FRAT1Q92837 279 aaPredicted RBP17.22■□□□□ 0.35
UPK1A-201ENST00000222275 ZNRF3Q9ULT6 936 aa17.22■□□□□ 0.35
UPK1A-201ENST00000222275 NSFL1CQ9UNZ2 370 aaKnown RBP17.22■□□□□ 0.35
UPK1A-201ENST00000222275 PASKQ96RG2 1323 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms