RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 ZNF831Q5JPB2 1677 aa21.25■□□□□ 0.99
GCDH-201ENST00000222214 NMIQ13287 307 aaPredicted RBP21.25■□□□□ 0.99
GCDH-201ENST00000222214 CUL4AQ13619 759 aa21.25■□□□□ 0.99
GCDH-201ENST00000222214 VPS72Q15906 364 aa21.25■□□□□ 0.99
GCDH-201ENST00000222214 FAM89AQ96GI7 184 aa21.25■□□□□ 0.99
GCDH-201ENST00000222214 CEP126Q9P2H0 1117 aa21.25■□□□□ 0.99
GCDH-201ENST00000222214 LOC102724428A0A0B4J2F2 783 aa21.25■□□□□ 0.99
GCDH-201ENST00000222214 EIF5P55010 431 aaKnown RBP21.25■□□□□ 0.99
GCDH-201ENST00000222214 SIK1P57059 783 aa21.25■□□□□ 0.99
GCDH-201ENST00000222214 IFIT5Q13325 482 aaKnown RBP21.25■□□□□ 0.99
GCDH-201ENST00000222214 TM6SF1Q9BZW5 370 aa21.25■□□□□ 0.99
GCDH-201ENST00000222214 MED23Q9ULK4 1368 aa21.25■□□□□ 0.99
GCDH-201ENST00000222214 SPEF2Q9C093 1822 aa21.24■□□□□ 0.99
GCDH-201ENST00000222214 MYH3P11055 1940 aa21.24■□□□□ 0.99
GCDH-201ENST00000222214 ATP6V1AP38606 617 aa21.24■□□□□ 0.99
GCDH-201ENST00000222214 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.24■□□□□ 0.99
GCDH-201ENST00000222214 MAP4K1Q92918 833 aa21.24■□□□□ 0.99
GCDH-201ENST00000222214 AK7Q96M32 723 aa21.24■□□□□ 0.99
GCDH-201ENST00000222214 ZKSCAN1P17029 563 aaPredicted RBP21.23■□□□□ 0.99
GCDH-201ENST00000222214 TAF7LQ5H9L4 462 aa21.23■□□□□ 0.99
GCDH-201ENST00000222214 LRRC24Q50LG9 513 aa21.23■□□□□ 0.99
GCDH-201ENST00000222214 ACSBG1Q96GR2 724 aa21.23■□□□□ 0.99
GCDH-201ENST00000222214 FAM227BQ96M60 508 aa21.23■□□□□ 0.99
GCDH-201ENST00000222214 NEUROD6Q96NK8 337 aa21.23■□□□□ 0.99
GCDH-201ENST00000222214 PALLDQ8WX93 1383 aa21.22■□□□□ 0.99
GCDH-201ENST00000222214 PTH1RQ03431 593 aa21.22■□□□□ 0.99
GCDH-201ENST00000222214 NECTIN1Q15223 517 aa21.22■□□□□ 0.99
GCDH-201ENST00000222214 RNF20Q5VTR2 975 aa21.22■□□□□ 0.99
GCDH-201ENST00000222214 ZNF34Q8IZ26 560 aa21.22■□□□□ 0.99
GCDH-201ENST00000222214 UPF3BQ9BZI7 483 aaKnown RBP21.22■□□□□ 0.99
GCDH-201ENST00000222214 GPTP24298 496 aa21.21■□□□□ 0.99
GCDH-201ENST00000222214 INTS5Q6P9B9 1019 aaKnown RBP21.21■□□□□ 0.99
GCDH-201ENST00000222214 NGLY1Q96IV0 654 aa21.21■□□□□ 0.99
GCDH-201ENST00000222214 ZNF594Q96JF6 807 aaPredicted RBP21.21■□□□□ 0.99
GCDH-201ENST00000222214 TRMT112Q9UI30 125 aaKnown RBP21.21■□□□□ 0.99
GCDH-201ENST00000222214 BCL9LQ86UU0 1499 aa21.21■□□□□ 0.99
GCDH-201ENST00000222214 SPATA31A6Q5VVP1 1343 aa21.21■□□□□ 0.99
GCDH-201ENST00000222214 A0A0D9SFI3 127 aa21.21■□□□□ 0.99
GCDH-201ENST00000222214 A0A1B0GUL7 405 aa21.21■□□□□ 0.99
GCDH-201ENST00000222214 GOLGA6L22H0YM25 854 aa21.21■□□□□ 0.99
GCDH-201ENST00000222214 PDE8AO60658 829 aa21.21■□□□□ 0.99
GCDH-201ENST00000222214 CYP2E1P05181 493 aaPredicted RBP21.21■□□□□ 0.99
GCDH-201ENST00000222214 CRKLP46109 303 aaKnown RBP21.21■□□□□ 0.99
GCDH-201ENST00000222214 CTSWP56202 376 aa21.21■□□□□ 0.99
GCDH-201ENST00000222214 KBTBD3Q8NAB2 608 aa21.21■□□□□ 0.99
GCDH-201ENST00000222214 IRS4O14654 1257 aaPredicted RBP21.2■□□□□ 0.98
GCDH-201ENST00000222214 KCNJ4P48050 445 aa21.2■□□□□ 0.98
GCDH-201ENST00000222214 RASEFQ8IZ41 740 aa21.2■□□□□ 0.98
GCDH-201ENST00000222214 FNBP4Q8N3X1 1017 aaPredicted RBP21.2■□□□□ 0.98
GCDH-201ENST00000222214 TTLL11Q8NHH1 800 aa21.2■□□□□ 0.98
GCDH-201ENST00000222214 TTC14Q96N46 770 aa21.2■□□□□ 0.98
GCDH-201ENST00000222214 RBM8AQ9Y5S9 174 aaKnown RBP21.2■□□□□ 0.98
GCDH-201ENST00000222214 A0A0G2JS52 829 aa21.19■□□□□ 0.98
GCDH-201ENST00000222214 DNAJC2Q99543 621 aaKnown RBP21.19■□□□□ 0.98
GCDH-201ENST00000222214 HMG20BQ9P0W2 317 aa21.19■□□□□ 0.98
GCDH-201ENST00000222214 TBC1D2BQ9UPU7 963 aa21.19■□□□□ 0.98
GCDH-201ENST00000222214 ANKRD18BA2A2Z9 1011 aa21.19■□□□□ 0.98
GCDH-201ENST00000222214 HSP90B1P14625 803 aaKnown RBP21.19■□□□□ 0.98
GCDH-201ENST00000222214 TIMM10P62072 90 aa21.19■□□□□ 0.98
GCDH-201ENST00000222214 PRPF40BQ6NWY9 871 aaKnown RBP21.19■□□□□ 0.98
GCDH-201ENST00000222214 C8orf37Q96NL8 207 aa21.19■□□□□ 0.98
GCDH-201ENST00000222214 PSMA5P28066 241 aa21.18■□□□□ 0.98
GCDH-201ENST00000222214 SSFA2P28290 1259 aa21.18■□□□□ 0.98
GCDH-201ENST00000222214 SKOR2Q2VWA4 1001 aaPredicted RBP21.18■□□□□ 0.98
GCDH-201ENST00000222214 LRRFIP1Q32MZ4 808 aaKnown RBP21.18■□□□□ 0.98
GCDH-201ENST00000222214 PARP10Q53GL7 1025 aa21.18■□□□□ 0.98
GCDH-201ENST00000222214 CCDC158Q5M9N0 1113 aa21.18■□□□□ 0.98
GCDH-201ENST00000222214 ZGPATQ8N5A5 531 aaKnown RBP21.18■□□□□ 0.98
GCDH-201ENST00000222214 PUS3Q9BZE2 481 aaKnown RBP21.18■□□□□ 0.98
GCDH-201ENST00000222214 PAG1Q9NWQ8 432 aa21.18■□□□□ 0.98
GCDH-201ENST00000222214 ABCC12Q96J65 1359 aa21.18■□□□□ 0.98
GCDH-201ENST00000222214 FAM98CQ17RN3 349 aaKnown RBP21.17■□□□□ 0.98
GCDH-201ENST00000222214 VPS53Q5VIR6 699 aa21.17■□□□□ 0.98
GCDH-201ENST00000222214 CREB3L3Q68CJ9 461 aa21.17■□□□□ 0.98
GCDH-201ENST00000222214 ZSWIM6Q9HCJ5 1215 aa21.17■□□□□ 0.98
GCDH-201ENST00000222214 COL5A3P25940 1745 aaPredicted RBP21.17■□□□□ 0.98
GCDH-201ENST00000222214 SH3TC1Q8TE82 1336 aa21.17■□□□□ 0.98
GCDH-201ENST00000222214 TRAK2O60296 914 aa21.17■□□□□ 0.98
GCDH-201ENST00000222214 CASTP20810 708 aaKnown RBP21.17■□□□□ 0.98
GCDH-201ENST00000222214 ITGA6P23229 1130 aa21.17■□□□□ 0.98
GCDH-201ENST00000222214 MCMDC2Q4G0Z9 681 aa21.17■□□□□ 0.98
GCDH-201ENST00000222214 CYP46A1Q9Y6A2 500 aa21.17■□□□□ 0.98
GCDH-201ENST00000222214 UBN2Q6ZU65 1347 aa21.16■□□□□ 0.98
GCDH-201ENST00000222214 IFIT1P09914 478 aaKnown RBP21.16■□□□□ 0.98
GCDH-201ENST00000222214 TSGA10IPQ3SY00 556 aa21.16■□□□□ 0.98
GCDH-201ENST00000222214 EDC3Q96F86 508 aaKnown RBP21.16■□□□□ 0.98
GCDH-201ENST00000222214 LIMCH1Q9UPQ0 1083 aa21.16■□□□□ 0.98
GCDH-201ENST00000222214 ITPK1Q13572 414 aa21.16■□□□□ 0.98
GCDH-201ENST00000222214 USPL1Q5W0Q7 1092 aa21.16■□□□□ 0.98
GCDH-201ENST00000222214 JAKMIP1Q96N16 626 aaKnown RBP21.16■□□□□ 0.98
GCDH-201ENST00000222214 HELLSQ9NRZ9 838 aa21.16■□□□□ 0.98
GCDH-201ENST00000222214 RGL2O15211 777 aa21.15■□□□□ 0.98
GCDH-201ENST00000222214 TAF5LO75529 589 aa21.15■□□□□ 0.98
GCDH-201ENST00000222214 LDHAL6AQ6ZMR3 332 aa21.15■□□□□ 0.98
GCDH-201ENST00000222214 RIPOR2Q9Y4F9 1068 aa21.15■□□□□ 0.98
GCDH-201ENST00000222214 RPAP1Q9BWH6 1393 aaPredicted RBP21.14■□□□□ 0.98
GCDH-201ENST00000222214 SLC27A2O14975 620 aa21.14■□□□□ 0.98
GCDH-201ENST00000222214 KRT32Q14532 448 aa21.14■□□□□ 0.98
GCDH-201ENST00000222214 GORABQ5T7V8 394 aa21.14■□□□□ 0.98
GCDH-201ENST00000222214 DDX46Q7L014 1031 aaKnown RBP21.14■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms