RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 NAPBQ9H115 298 aa11.15□□□□□ -0.62
CCDC113-201ENST00000219299 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.15□□□□□ -0.63
CCDC113-201ENST00000219299 PALLDQ8WX93 1383 aa11.14□□□□□ -0.63
CCDC113-201ENST00000219299 GOLGA6L19H0YKK7 550 aa11.14□□□□□ -0.63
CCDC113-201ENST00000219299 ATG3Q9NT62 314 aa11.14□□□□□ -0.63
CCDC113-201ENST00000219299 MED14O60244 1454 aa11.14□□□□□ -0.63
CCDC113-201ENST00000219299 EYA2O00167 538 aa11.14□□□□□ -0.63
CCDC113-201ENST00000219299 TPM3P06753 285 aa11.14□□□□□ -0.63
CCDC113-201ENST00000219299 UQCRFS1P1P0C7P4 283 aa11.14□□□□□ -0.63
CCDC113-201ENST00000219299 HEG1Q9ULI3 1381 aa11.14□□□□□ -0.63
CCDC113-201ENST00000219299 F8W031 263 aaPredicted RBP11.14□□□□□ -0.63
CCDC113-201ENST00000219299 RIMBP2O15034 1052 aa11.14□□□□□ -0.63
CCDC113-201ENST00000219299 VPS72Q15906 364 aa11.14□□□□□ -0.63
CCDC113-201ENST00000219299 BMP2KLQ5H9B9 411 aa11.14□□□□□ -0.63
CCDC113-201ENST00000219299 PRPF40BQ6NWY9 871 aaKnown RBP11.14□□□□□ -0.63
CCDC113-201ENST00000219299 JAG2Q9Y219 1238 aa11.14□□□□□ -0.63
CCDC113-201ENST00000219299 STK3Q13188 491 aa11.14□□□□□ -0.63
CCDC113-201ENST00000219299 KIAA1210Q9ULL0 1709 aa11.13□□□□□ -0.63
CCDC113-201ENST00000219299 DCCP43146 1447 aa11.13□□□□□ -0.63
CCDC113-201ENST00000219299 POLR3DP05423 398 aaPredicted RBP11.13□□□□□ -0.63
CCDC113-201ENST00000219299 IMMTQ16891 758 aaKnown RBP11.13□□□□□ -0.63
CCDC113-201ENST00000219299 GIGYF2Q6Y7W6 1299 aaKnown RBP11.13□□□□□ -0.63
CCDC113-201ENST00000219299 MAP3K15Q6ZN16 1313 aa11.13□□□□□ -0.63
CCDC113-201ENST00000219299 NUCB2P80303 420 aa11.13□□□□□ -0.63
CCDC113-201ENST00000219299 BEND3Q5T5X7 828 aa11.13□□□□□ -0.63
CCDC113-201ENST00000219299 SMC5Q8IY18 1101 aa11.13□□□□□ -0.63
CCDC113-201ENST00000219299 TTC22Q5TAA0 569 aa11.13□□□□□ -0.63
CCDC113-201ENST00000219299 SDSP20132 328 aa11.13□□□□□ -0.63
CCDC113-201ENST00000219299 TTF1Q15361 905 aaPredicted RBP11.13□□□□□ -0.63
CCDC113-201ENST00000219299 C3P01024 1663 aa11.13□□□□□ -0.63
CCDC113-201ENST00000219299 MYO3AQ8NEV4 1616 aa11.12□□□□□ -0.63
CCDC113-201ENST00000219299 FLAD1Q8NFF5 587 aa11.12□□□□□ -0.63
CCDC113-201ENST00000219299 NUP133Q8WUM0 1156 aa11.12□□□□□ -0.63
CCDC113-201ENST00000219299 UBAC1Q9BSL1 405 aa11.12□□□□□ -0.63
CCDC113-201ENST00000219299 R3HCC1Q9Y3T6 440 aaKnown RBP11.12□□□□□ -0.63
CCDC113-201ENST00000219299 U3KPZ7 1027 aaPredicted RBP11.12□□□□□ -0.63
CCDC113-201ENST00000219299 TAF5LO75529 589 aa11.12□□□□□ -0.63
CCDC113-201ENST00000219299 CCDC39Q9UFE4 941 aa11.12□□□□□ -0.63
CCDC113-201ENST00000219299 SPATA31A1Q5TZJ5 1347 aa11.12□□□□□ -0.63
CCDC113-201ENST00000219299 BECN2A8MW95 431 aa11.12□□□□□ -0.63
CCDC113-201ENST00000219299 LDHCP07864 332 aa11.12□□□□□ -0.63
CCDC113-201ENST00000219299 TBC1D9Q6ZT07 1266 aa11.12□□□□□ -0.63
CCDC113-201ENST00000219299 NEURL4Q96JN8 1562 aa11.11□□□□□ -0.63
CCDC113-201ENST00000219299 SAFBQ15424 915 aaKnown RBP eCLIP11.11□□□□□ -0.63
CCDC113-201ENST00000219299 A0A0U1RQG5 324 aaPredicted RBP11.11□□□□□ -0.63
CCDC113-201ENST00000219299 A0A1B0GUL7 405 aa11.11□□□□□ -0.63
CCDC113-201ENST00000219299 CRACR2BQ8N4Y2 399 aaPredicted RBP11.11□□□□□ -0.63
CCDC113-201ENST00000219299 MARCH10Q8NA82 808 aaPredicted RBP11.11□□□□□ -0.63
CCDC113-201ENST00000219299 RBM17Q96I25 401 aaKnown RBP11.11□□□□□ -0.63
CCDC113-201ENST00000219299 MKNK2Q9HBH9 465 aa11.11□□□□□ -0.63
CCDC113-201ENST00000219299 H0YIN7 160 aa11.11□□□□□ -0.63
CCDC113-201ENST00000219299 SLC9C2Q5TAH2 1124 aa11.11□□□□□ -0.63
CCDC113-201ENST00000219299 NLGN1Q8N2Q7 840 aa11.11□□□□□ -0.63
CCDC113-201ENST00000219299 NASPP49321 788 aaPredicted RBP11.11□□□□□ -0.63
CCDC113-201ENST00000219299 SLC4A8Q2Y0W8 1093 aa11.11□□□□□ -0.63
CCDC113-201ENST00000219299 SLF2Q8IX21 1173 aa11.11□□□□□ -0.63
CCDC113-201ENST00000219299 ABCC4O15439 1325 aa11.11□□□□□ -0.63
CCDC113-201ENST00000219299 KRT32Q14532 448 aa11.1□□□□□ -0.63
CCDC113-201ENST00000219299 ATP2B1P20020 1258 aa11.1□□□□□ -0.63
CCDC113-201ENST00000219299 MCM2P49736 904 aa11.1□□□□□ -0.63
CCDC113-201ENST00000219299 ZBTB38Q8NAP3 1195 aaPredicted RBP11.1□□□□□ -0.63
CCDC113-201ENST00000219299 DBNDD2Q9BQY9 259 aa11.1□□□□□ -0.63
CCDC113-201ENST00000219299 ANKRD2Q9GZV1 360 aa11.1□□□□□ -0.63
CCDC113-201ENST00000219299 SRP68Q9UHB9 627 aaKnown RBP11.1□□□□□ -0.63
CCDC113-201ENST00000219299 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.1□□□□□ -0.63
CCDC113-201ENST00000219299 CASTP20810 708 aaKnown RBP11.1□□□□□ -0.63
CCDC113-201ENST00000219299 HAND2P61296 217 aa11.1□□□□□ -0.63
CCDC113-201ENST00000219299 RPS8P62241 208 aaKnown RBP11.1□□□□□ -0.63
CCDC113-201ENST00000219299 SPTY2D1Q68D10 685 aaPredicted RBP11.1□□□□□ -0.63
CCDC113-201ENST00000219299 OTUD7AQ8TE49 926 aaPredicted RBP11.1□□□□□ -0.63
CCDC113-201ENST00000219299 ZNF592Q92610 1267 aa11.1□□□□□ -0.63
CCDC113-201ENST00000219299 BAG3O95817 575 aa11.1□□□□□ -0.63
CCDC113-201ENST00000219299 CYP7A1P22680 504 aa11.1□□□□□ -0.63
CCDC113-201ENST00000219299 IQGAP1P46940 1657 aa11.1□□□□□ -0.63
CCDC113-201ENST00000219299 ZNF213O14771 459 aa11.09□□□□□ -0.63
CCDC113-201ENST00000219299 UFL1O94874 794 aa11.09□□□□□ -0.63
CCDC113-201ENST00000219299 JDP2Q8WYK2 163 aa11.09□□□□□ -0.63
CCDC113-201ENST00000219299 ZNF804AQ7Z570 1209 aa11.09□□□□□ -0.63
CCDC113-201ENST00000219299 CWC22Q9HCG8 908 aaKnown RBP11.09□□□□□ -0.63
CCDC113-201ENST00000219299 KDRP35968 1356 aa11.09□□□□□ -0.63
CCDC113-201ENST00000219299 CCDC69A6NI79 296 aa11.09□□□□□ -0.63
CCDC113-201ENST00000219299 RRP9O43818 475 aaKnown RBP11.09□□□□□ -0.63
CCDC113-201ENST00000219299 TRAK2O60296 914 aa11.09□□□□□ -0.63
CCDC113-201ENST00000219299 RANBP6O60518 1105 aaKnown RBP11.09□□□□□ -0.63
CCDC113-201ENST00000219299 OGFOD1Q8N543 542 aa11.09□□□□□ -0.63
CCDC113-201ENST00000219299 PDRG1Q9NUG6 133 aa11.09□□□□□ -0.63
CCDC113-201ENST00000219299 MPHOSPH10O00566 681 aaKnown RBP11.09□□□□□ -0.63
CCDC113-201ENST00000219299 PCCAP05165 728 aaPredicted RBP11.09□□□□□ -0.63
CCDC113-201ENST00000219299 SSH2Q76I76 1423 aa11.09□□□□□ -0.63
CCDC113-201ENST00000219299 NAA16Q6N069 864 aaPredicted RBP11.08□□□□□ -0.63
CCDC113-201ENST00000219299 PAG1Q9NWQ8 432 aa11.08□□□□□ -0.63
CCDC113-201ENST00000219299 SPATA31A5Q5VU36 1347 aa11.08□□□□□ -0.64
CCDC113-201ENST00000219299 SPATA31A7Q8IWB4 1347 aa11.08□□□□□ -0.64
CCDC113-201ENST00000219299 SIGLEC1Q9BZZ2 1709 aa11.08□□□□□ -0.64
CCDC113-201ENST00000219299 CCDC66A2RUB6 948 aa11.08□□□□□ -0.64
CCDC113-201ENST00000219299 CTSWP56202 376 aa11.08□□□□□ -0.64
CCDC113-201ENST00000219299 PLEKHM2Q8IWE5 1019 aa11.08□□□□□ -0.64
CCDC113-201ENST00000219299 XBP1P17861 261 aa11.08□□□□□ -0.64
CCDC113-201ENST00000219299 ANKRD1Q15327 319 aa11.08□□□□□ -0.64
CCDC113-201ENST00000219299 TNNI3KQ59H18 835 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms