RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 FAM200AQ8TCP9 573 aa15.79■□□□□ 0.12
SRP54-201ENST00000216774 RAPGEF4Q8WZA2 1011 aa15.79■□□□□ 0.12
SRP54-201ENST00000216774 ZNF830Q96NB3 372 aaPredicted RBP15.79■□□□□ 0.12
SRP54-201ENST00000216774 TTC12Q9H892 705 aaPredicted RBP15.79■□□□□ 0.12
SRP54-201ENST00000216774 KIF1AQ12756 1690 aa15.78■□□□□ 0.12
SRP54-201ENST00000216774 COL9A3Q14050 684 aaPredicted RBP15.78■□□□□ 0.12
SRP54-201ENST00000216774 EPHA10Q5JZY3 1008 aa15.78■□□□□ 0.12
SRP54-201ENST00000216774 DNTTIP2Q5QJE6 756 aaKnown RBP15.78■□□□□ 0.12
SRP54-201ENST00000216774 COPS6Q7L5N1 327 aa15.78■□□□□ 0.12
SRP54-201ENST00000216774 MYD88Q99836 296 aa15.78■□□□□ 0.12
SRP54-201ENST00000216774 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.78■□□□□ 0.122e-9■■■□□ 17
SRP54-201ENST00000216774 GOLGA6L6A8MZA4 724 aa15.78■□□□□ 0.12
SRP54-201ENST00000216774 MYL6BP14649 208 aa15.78■□□□□ 0.12
SRP54-201ENST00000216774 RFX5P48382 616 aaPredicted RBP15.78■□□□□ 0.12
SRP54-201ENST00000216774 RABL6Q3YEC7 729 aaPredicted RBP15.78■□□□□ 0.12
SRP54-201ENST00000216774 TNNI3KQ59H18 835 aa15.78■□□□□ 0.12
SRP54-201ENST00000216774 ANKRD13DQ6ZTN6 518 aa15.78■□□□□ 0.12
SRP54-201ENST00000216774 FERMT3Q86UX7 667 aa15.78■□□□□ 0.12
SRP54-201ENST00000216774 DDX19AQ9NUU7 478 aaKnown RBP15.78■□□□□ 0.12
SRP54-201ENST00000216774 DBNLQ9UJU6 430 aaKnown RBP15.78■□□□□ 0.12
SRP54-201ENST00000216774 TAF6LQ9Y6J9 622 aa15.78■□□□□ 0.12
SRP54-201ENST00000216774 FPGT-TNNI3KV9GXZ4 949 aa15.78■□□□□ 0.12
SRP54-201ENST00000216774 DTNBO60941 627 aa15.77■□□□□ 0.12
SRP54-201ENST00000216774 SLC39A6Q13433 755 aa15.77■□□□□ 0.12
SRP54-201ENST00000216774 KRT28Q7Z3Y7 464 aa15.77■□□□□ 0.12
SRP54-201ENST00000216774 SPATA32Q96LK8 384 aa15.77■□□□□ 0.12
SRP54-201ENST00000216774 U3KPZ7 1027 aaPredicted RBP15.77■□□□□ 0.12
SRP54-201ENST00000216774 AP5Z1O43299 807 aa15.77■□□□□ 0.11
SRP54-201ENST00000216774 PHKG2P15735 406 aa15.77■□□□□ 0.11
SRP54-201ENST00000216774 LRP10Q7Z4F1 713 aa15.77■□□□□ 0.11
SRP54-201ENST00000216774 GTF3C6Q969F1 213 aa15.77■□□□□ 0.11
SRP54-201ENST00000216774 TCEANC2Q96MN5 208 aa15.77■□□□□ 0.11
SRP54-201ENST00000216774 RGPD5Q99666 1765 aa15.76■□□□□ 0.11
SRP54-201ENST00000216774 GOLGA6L4A6NEF3 574 aa15.76■□□□□ 0.11
SRP54-201ENST00000216774 SNRPA1P09661 255 aaKnown RBP15.76■□□□□ 0.11
SRP54-201ENST00000216774 LIG1P18858 919 aa15.76■□□□□ 0.11
SRP54-201ENST00000216774 PTPN12Q05209 780 aaKnown RBP15.76■□□□□ 0.11
SRP54-201ENST00000216774 TYRO3Q06418 890 aa15.76■□□□□ 0.11
SRP54-201ENST00000216774 RBM43Q6ZSC3 357 aaKnown RBP15.76■□□□□ 0.11
SRP54-201ENST00000216774 MPNDQ8N594 471 aa15.76■□□□□ 0.11
SRP54-201ENST00000216774 NEK1Q96PY6 1258 aa15.76■□□□□ 0.11
SRP54-201ENST00000216774 GTF2F1P35269 517 aaKnown RBP eCLIP15.75■□□□□ 0.11
SRP54-201ENST00000216774 PLCB2Q00722 1185 aa15.75■□□□□ 0.11
SRP54-201ENST00000216774 NFATC2IPQ8NCF5 419 aa15.75■□□□□ 0.11
SRP54-201ENST00000216774 LEO1Q8WVC0 666 aaPredicted RBP15.75■□□□□ 0.11
SRP54-201ENST00000216774 ZNF496Q96IT1 587 aaPredicted RBP15.75■□□□□ 0.11
SRP54-201ENST00000216774 TNMDQ9H2S6 317 aa15.75■□□□□ 0.11
SRP54-201ENST00000216774 MRVI1Q9Y6F6 885 aa15.75■□□□□ 0.11
SRP54-201ENST00000216774 TATP17735 454 aaPredicted RBP15.75■□□□□ 0.11
SRP54-201ENST00000216774 TFCP2Q12800 502 aa15.75■□□□□ 0.11
SRP54-201ENST00000216774 TICAM2Q86XR7 235 aa15.75■□□□□ 0.11
SRP54-201ENST00000216774 KIAA1524Q8TCG1 905 aa15.75■□□□□ 0.11
SRP54-201ENST00000216774 HAUS7Q99871 368 aa15.75■□□□□ 0.11
SRP54-201ENST00000216774 FAM173BQ6P4H8 233 aa15.74■□□□□ 0.11
SRP54-201ENST00000216774 CLSTN2Q9H4D0 955 aa15.74■□□□□ 0.11
SRP54-201ENST00000216774 DACT1Q9NYF0 836 aa15.74■□□□□ 0.11
SRP54-201ENST00000216774 ALS2Q96Q42 1657 aa15.74■□□□□ 0.11
SRP54-201ENST00000216774 ZNF609O15014 1411 aa15.74■□□□□ 0.11
SRP54-201ENST00000216774 STK3Q13188 491 aa15.74■□□□□ 0.11
SRP54-201ENST00000216774 MCMDC2Q4G0Z9 681 aa15.74■□□□□ 0.11
SRP54-201ENST00000216774 IFNL2Q8IZJ0 200 aa15.74■□□□□ 0.11
SRP54-201ENST00000216774 VSIG10Q8N0Z9 540 aa15.74■□□□□ 0.11
SRP54-201ENST00000216774 EDC3Q96F86 508 aaKnown RBP15.74■□□□□ 0.11
SRP54-201ENST00000216774 TTC5Q8N0Z6 440 aa15.73■□□□□ 0.11
SRP54-201ENST00000216774 ZSCAN16Q9H4T2 348 aaPredicted RBP15.73■□□□□ 0.11
SRP54-201ENST00000216774 NLRP2Q9NX02 1062 aa15.73■□□□□ 0.11
SRP54-201ENST00000216774 C1orf167Q5SNV9 1468 aa15.73■□□□□ 0.11
SRP54-201ENST00000216774 HMGB1P09429 215 aaKnown RBP15.73■□□□□ 0.11
SRP54-201ENST00000216774 RESTQ13127 1097 aa15.73■□□□□ 0.11
SRP54-201ENST00000216774 CAMK4Q16566 473 aa15.73■□□□□ 0.11
SRP54-201ENST00000216774 UBE3BQ7Z3V4 1068 aa15.73■□□□□ 0.11
SRP54-201ENST00000216774 DCAF5Q96JK2 942 aa15.73■□□□□ 0.11
SRP54-201ENST00000216774 LLPHQ9BRT6 129 aaKnown RBP15.73■□□□□ 0.11
SRP54-201ENST00000216774 KCNF1Q9H3M0 494 aa15.73■□□□□ 0.11
SRP54-201ENST00000216774 CHMP3Q9Y3E7 222 aa15.73■□□□□ 0.11
SRP54-201ENST00000216774 SH3TC1Q8TE82 1336 aa15.73■□□□□ 0.11
SRP54-201ENST00000216774 AFDNP55196 1824 aaKnown RBP15.72■□□□□ 0.11
SRP54-201ENST00000216774 MEGF6O75095 1541 aa15.72■□□□□ 0.11
SRP54-201ENST00000216774 CAVIN2O95810 425 aa15.72■□□□□ 0.11
SRP54-201ENST00000216774 Q6ZUG5 572 aa15.72■□□□□ 0.11
SRP54-201ENST00000216774 FMNL2Q96PY5 1086 aa15.72■□□□□ 0.11
SRP54-201ENST00000216774 TFIP11Q9UBB9 837 aaKnown RBP15.72■□□□□ 0.11
SRP54-201ENST00000216774 ARFGEF2Q9Y6D5 1785 aa15.72■□□□□ 0.11
SRP54-201ENST00000216774 CFAP45Q9UL16 551 aa15.71■□□□□ 0.11
SRP54-201ENST00000216774 PALLDQ8WX93 1383 aa15.71■□□□□ 0.11
SRP54-201ENST00000216774 JAK2O60674 1132 aa15.71■□□□□ 0.11
SRP54-201ENST00000216774 CYP21A2P08686 494 aa15.71■□□□□ 0.11
SRP54-201ENST00000216774 ZC3H6P61129 1189 aaKnown RBP15.71■□□□□ 0.11
SRP54-201ENST00000216774 C17orf53Q8N3J3 647 aaPredicted RBP15.71■□□□□ 0.11
SRP54-201ENST00000216774 KBTBD3Q8NAB2 608 aa15.71■□□□□ 0.11
SRP54-201ENST00000216774 BRF1Q92994 677 aa15.71■□□□□ 0.11
SRP54-201ENST00000216774 DNAJC2Q99543 621 aaKnown RBP15.71■□□□□ 0.11
SRP54-201ENST00000216774 DBNDD2Q9BQY9 259 aa15.71■□□□□ 0.11
SRP54-201ENST00000216774 USP16Q9Y5T5 823 aa15.71■□□□□ 0.11
SRP54-201ENST00000216774 A0A087WZG4 1122 aa15.7■□□□□ 0.1
SRP54-201ENST00000216774 CASP7P55210 303 aa15.7■□□□□ 0.1
SRP54-201ENST00000216774 ANO6Q4KMQ2 910 aa15.7■□□□□ 0.1
SRP54-201ENST00000216774 LUZP1Q86V48 1076 aa15.7■□□□□ 0.1
SRP54-201ENST00000216774 CKAP2LQ8IYA6 745 aa15.7■□□□□ 0.1
SRP54-201ENST00000216774 PLBD2Q8NHP8 589 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms