RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 MED23Q9ULK4 1368 aa35.81■■■■□ 3.32
PABPN1-201ENST00000216727 ZNF609O15014 1411 aa35.81■■■■□ 3.32
PABPN1-201ENST00000216727 NUP98P52948 1817 aa35.81■■■■□ 3.32
PABPN1-201ENST00000216727 EIF5P55010 431 aaKnown RBP35.8■■■■□ 3.32
PABPN1-201ENST00000216727 MAP4K1Q92918 833 aa35.79■■■■□ 3.32
PABPN1-201ENST00000216727 A0A0D9SFI3 127 aa35.79■■■■□ 3.32
PABPN1-201ENST00000216727 GPTP24298 496 aa35.79■■■■□ 3.32
PABPN1-201ENST00000216727 TICAM2Q86XR7 235 aa35.79■■■■□ 3.32
PABPN1-201ENST00000216727 LOC102724428A0A0B4J2F2 783 aa35.78■■■■□ 3.32
PABPN1-201ENST00000216727 CYP2E1P05181 493 aaPredicted RBP35.78■■■■□ 3.32
PABPN1-201ENST00000216727 SIK1P57059 783 aa35.78■■■■□ 3.32
PABPN1-201ENST00000216727 NECTIN1Q15223 517 aa35.78■■■■□ 3.32
PABPN1-201ENST00000216727 ZGPATQ8N5A5 531 aaKnown RBP35.78■■■■□ 3.32
PABPN1-201ENST00000216727 INTS4Q96HW7 963 aaKnown RBP35.78■■■■□ 3.32
PABPN1-201ENST00000216727 CCDC87Q9NVE4 849 aa35.78■■■■□ 3.32
PABPN1-201ENST00000216727 JCADQ9P266 1359 aa35.78■■■■□ 3.32
PABPN1-201ENST00000216727 INTS5Q6P9B9 1019 aaKnown RBP35.78■■■■□ 3.32
PABPN1-201ENST00000216727 RREB1Q92766 1687 aa35.77■■■■□ 3.32
PABPN1-201ENST00000216727 SSFA2P28290 1259 aa35.77■■■■□ 3.32
PABPN1-201ENST00000216727 ATP6V1AP38606 617 aa35.77■■■■□ 3.32
PABPN1-201ENST00000216727 NEUROD6Q96NK8 337 aa35.77■■■■□ 3.32
PABPN1-201ENST00000216727 PUS3Q9BZE2 481 aaKnown RBP35.77■■■■□ 3.32
PABPN1-201ENST00000216727 IFIT5Q13325 482 aaKnown RBP35.76■■■■□ 3.32
PABPN1-201ENST00000216727 EDC3Q96F86 508 aaKnown RBP35.76■■■■□ 3.32
PABPN1-201ENST00000216727 TTC14Q96N46 770 aa35.76■■■■□ 3.32
PABPN1-201ENST00000216727 CEP126Q9P2H0 1117 aa35.76■■■■□ 3.32
PABPN1-201ENST00000216727 VPS72Q15906 364 aa35.76■■■■□ 3.31
PABPN1-201ENST00000216727 TM6SF1Q9BZW5 370 aa35.76■■■■□ 3.31
PABPN1-201ENST00000216727 TBC1D2BQ9UPU7 963 aa35.76■■■■□ 3.31
PABPN1-201ENST00000216727 BCL9LQ86UU0 1499 aa35.75■■■■□ 3.31
PABPN1-201ENST00000216727 TIMM10P62072 90 aa35.75■■■■□ 3.31
PABPN1-201ENST00000216727 ZNF34Q8IZ26 560 aa35.75■■■■□ 3.31
PABPN1-201ENST00000216727 SMARCC1Q92922 1105 aaPredicted RBP35.74■■■■□ 3.31
PABPN1-201ENST00000216727 PRPF40BQ6NWY9 871 aaKnown RBP35.74■■■■□ 3.31
PABPN1-201ENST00000216727 RBM8AQ9Y5S9 174 aaKnown RBP35.74■■■■□ 3.31
PABPN1-201ENST00000216727 A0A1B0GUL7 405 aa35.73■■■■□ 3.31
PABPN1-201ENST00000216727 PTMSP20962 102 aa35.73■■■■□ 3.31
PABPN1-201ENST00000216727 CRKLP46109 303 aaKnown RBP35.73■■■■□ 3.31
PABPN1-201ENST00000216727 TTLL11Q8NHH1 800 aa35.73■■■■□ 3.31
PABPN1-201ENST00000216727 DNAJC2Q99543 621 aaKnown RBP35.73■■■■□ 3.31
PABPN1-201ENST00000216727 PALLDQ8WX93 1383 aa35.73■■■■□ 3.31
PABPN1-201ENST00000216727 A0A0G2JS52 829 aa35.73■■■■□ 3.31
PABPN1-201ENST00000216727 TRMT112Q9UI30 125 aaKnown RBP35.73■■■■□ 3.31
PABPN1-201ENST00000216727 AKAP2Q9Y2D5 859 aa35.73■■■■□ 3.31
PABPN1-201ENST00000216727 ZKSCAN1P17029 563 aaPredicted RBP35.72■■■■□ 3.31
PABPN1-201ENST00000216727 KBTBD3Q8NAB2 608 aa35.72■■■■□ 3.31
PABPN1-201ENST00000216727 PPIL4Q8WUA2 492 aaKnown RBP eCLIP35.72■■■■□ 3.31
PABPN1-201ENST00000216727 CTSWP56202 376 aa35.71■■■■□ 3.31
PABPN1-201ENST00000216727 SYNE4Q8N205 404 aa35.71■■■■□ 3.31
PABPN1-201ENST00000216727 NGLY1Q96IV0 654 aa35.71■■■■□ 3.31
PABPN1-201ENST00000216727 IRS4O14654 1257 aaPredicted RBP35.71■■■■□ 3.31
PABPN1-201ENST00000216727 TAF7LQ5H9L4 462 aa35.71■■■■□ 3.31
PABPN1-201ENST00000216727 MYH3P11055 1940 aa35.71■■■■□ 3.31
PABPN1-201ENST00000216727 TRAK2O60296 914 aa35.7■■■■□ 3.31
PABPN1-201ENST00000216727 ITPK1Q13572 414 aa35.7■■■■□ 3.31
PABPN1-201ENST00000216727 CREB3L3Q68CJ9 461 aa35.7■■■■□ 3.31
PABPN1-201ENST00000216727 UBN2Q6ZU65 1347 aa35.7■■■■□ 3.31
PABPN1-201ENST00000216727 FAM98CQ17RN3 349 aaKnown RBP35.69■■■■□ 3.3
PABPN1-201ENST00000216727 C8orf37Q96NL8 207 aa35.69■■■■□ 3.3
PABPN1-201ENST00000216727 FNBP4Q8N3X1 1017 aaPredicted RBP35.69■■■■□ 3.3
PABPN1-201ENST00000216727 ZSWIM6Q9HCJ5 1215 aa35.69■■■■□ 3.3
PABPN1-201ENST00000216727 NDUFB9Q9Y6M9 179 aa35.69■■■■□ 3.3
PABPN1-201ENST00000216727 PDE8AO60658 829 aa35.68■■■■□ 3.3
PABPN1-201ENST00000216727 ZNF589Q86UQ0 364 aaPredicted RBP35.68■■■■□ 3.3
PABPN1-201ENST00000216727 AK7Q96M32 723 aa35.68■■■■□ 3.3
PABPN1-201ENST00000216727 SPEF2Q9C093 1822 aa35.68■■■■□ 3.3
PABPN1-201ENST00000216727 CASTP20810 708 aaKnown RBP35.67■■■■□ 3.3
PABPN1-201ENST00000216727 KCNJ4P48050 445 aa35.67■■■■□ 3.3
PABPN1-201ENST00000216727 CCDC85AQ96PX6 553 aaPredicted RBP35.67■■■■□ 3.3
PABPN1-201ENST00000216727 PAG1Q9NWQ8 432 aa35.67■■■■□ 3.3
PABPN1-201ENST00000216727 ZNF831Q5JPB2 1677 aa35.67■■■■□ 3.3
PABPN1-201ENST00000216727 TAF5LO75529 589 aa35.67■■■■□ 3.3
PABPN1-201ENST00000216727 ITGA6P23229 1130 aa35.67■■■■□ 3.3
PABPN1-201ENST00000216727 DDX46Q7L014 1031 aaKnown RBP35.67■■■■□ 3.3
PABPN1-201ENST00000216727 GREM2Q9H772 168 aa35.67■■■■□ 3.3
PABPN1-201ENST00000216727 RNF20Q5VTR2 975 aa35.66■■■■□ 3.3
PABPN1-201ENST00000216727 ANKRD18BA2A2Z9 1011 aa35.66■■■■□ 3.3
PABPN1-201ENST00000216727 VPS53Q5VIR6 699 aa35.66■■■■□ 3.3
PABPN1-201ENST00000216727 NOL8Q76FK4 1167 aaKnown RBP35.66■■■■□ 3.3
PABPN1-201ENST00000216727 JAKMIP1Q96N16 626 aaKnown RBP35.66■■■■□ 3.3
PABPN1-201ENST00000216727 RIPOR2Q9Y4F9 1068 aa35.66■■■■□ 3.3
PABPN1-201ENST00000216727 SLC27A2O14975 620 aa35.65■■■■□ 3.3
PABPN1-201ENST00000216727 BAG4O95429 457 aaKnown RBP35.65■■■■□ 3.3
PABPN1-201ENST00000216727 AK2P54819 239 aa35.65■■■■□ 3.3
PABPN1-201ENST00000216727 PKP1Q13835 747 aa35.65■■■■□ 3.3
PABPN1-201ENST00000216727 ADCK5Q3MIX3 580 aa35.65■■■■□ 3.3
PABPN1-201ENST00000216727 KCNQ2O43526 872 aa35.64■■■■□ 3.3
PABPN1-201ENST00000216727 MCMDC2Q4G0Z9 681 aa35.64■■■■□ 3.3
PABPN1-201ENST00000216727 USPL1Q5W0Q7 1092 aa35.64■■■■□ 3.3
PABPN1-201ENST00000216727 SH3TC1Q8TE82 1336 aa35.64■■■■□ 3.3
PABPN1-201ENST00000216727 HMG20BQ9P0W2 317 aa35.64■■■■□ 3.3
PABPN1-201ENST00000216727 LIMCH1Q9UPQ0 1083 aa35.64■■■■□ 3.3
PABPN1-201ENST00000216727 MYH14Q7Z406 1995 aaKnown RBP35.64■■■■□ 3.3
PABPN1-201ENST00000216727 IFIT1P09914 478 aaKnown RBP35.64■■■■□ 3.3
PABPN1-201ENST00000216727 CYP46A1Q9Y6A2 500 aa35.64■■■■□ 3.3
PABPN1-201ENST00000216727 RPAP1Q9BWH6 1393 aaPredicted RBP35.63■■■■□ 3.29
PABPN1-201ENST00000216727 GOLGA6L22H0YM25 854 aa35.63■■■■□ 3.29
PABPN1-201ENST00000216727 CAMTA2O94983 1202 aa35.63■■■■□ 3.29
PABPN1-201ENST00000216727 TSGA10IPQ3SY00 556 aa35.63■■■■□ 3.29
PABPN1-201ENST00000216727 RIC1Q4ADV7 1423 aa35.63■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms