RNA–Protein interactions for RNA: ENST00000215587.11

POLR2E-201, Transcript of RNA polymerase II subunit E, humanhuman

TSL 3

Gene POLR2E, Length 1,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-201ENST00000215587 SGIP1Q9BQI5 828 aa20.6■□□□□ 0.89
POLR2E-201ENST00000215587 DCTPP1Q9H773 170 aa20.6■□□□□ 0.89
POLR2E-201ENST00000215587 HCLS1P14317 486 aaPredicted RBP20.59■□□□□ 0.89
POLR2E-201ENST00000215587 TM4SF1P30408 202 aa20.59■□□□□ 0.89
POLR2E-201ENST00000215587 ERFEQ4G0M1 354 aa20.59■□□□□ 0.89
POLR2E-201ENST00000215587 CNBD1Q8NA66 436 aa20.58■□□□□ 0.89
POLR2E-201ENST00000215587 ZBTB47Q9UFB7 747 aaPredicted RBP20.58■□□□□ 0.89
POLR2E-201ENST00000215587 LAMB2P55268 1798 aa20.58■□□□□ 0.89
POLR2E-201ENST00000215587 HSP90AB4PQ58FF6 505 aa20.57■□□□□ 0.88
POLR2E-201ENST00000215587 SURF6O75683 361 aaKnown RBP20.56■□□□□ 0.88
POLR2E-201ENST00000215587 SERPINB2P05120 415 aa20.56■□□□□ 0.88
POLR2E-201ENST00000215587 CSF1RP07333 972 aa20.56■□□□□ 0.88
POLR2E-201ENST00000215587 ABCC12Q96J65 1359 aa20.56■□□□□ 0.88
POLR2E-201ENST00000215587 POLRMTO00411 1230 aaKnown RBP20.55■□□□□ 0.88
POLR2E-201ENST00000215587 ST5P78524 1137 aa20.55■□□□□ 0.88
POLR2E-201ENST00000215587 DDR1Q08345 913 aa20.55■□□□□ 0.88
POLR2E-201ENST00000215587 OS9Q13438 667 aaPredicted RBP20.55■□□□□ 0.88
POLR2E-201ENST00000215587 CCDC57Q2TAC2 916 aa20.55■□□□□ 0.88
POLR2E-201ENST00000215587 SLC10A5Q5PT55 438 aa20.55■□□□□ 0.88
POLR2E-201ENST00000215587 MSL1Q68DK7 614 aa20.55■□□□□ 0.88
POLR2E-201ENST00000215587 TTLL11Q8NHH1 800 aa20.55■□□□□ 0.88
POLR2E-201ENST00000215587 EXOC6BQ9Y2D4 811 aa20.55■□□□□ 0.88
POLR2E-201ENST00000215587 DDX60Q8IY21 1712 aaKnown RBP20.54■□□□□ 0.88
POLR2E-201ENST00000215587 RAB11FIP3O75154 756 aa20.54■□□□□ 0.88
POLR2E-201ENST00000215587 IFIT5Q13325 482 aaKnown RBP20.54■□□□□ 0.88
POLR2E-201ENST00000215587 FAM161AQ3B820 660 aa20.54■□□□□ 0.88
POLR2E-201ENST00000215587 CCDC152Q4G0S7 254 aa20.54■□□□□ 0.88
POLR2E-201ENST00000215587 SLC16A10Q8TF71 515 aa20.54■□□□□ 0.88
POLR2E-201ENST00000215587 PDZRN3Q9UPQ7 1066 aa20.54■□□□□ 0.88
POLR2E-201ENST00000215587 PARP3Q9Y6F1 533 aa20.54■□□□□ 0.88
POLR2E-201ENST00000215587 RIC1Q4ADV7 1423 aa20.53■□□□□ 0.88
POLR2E-201ENST00000215587 APBB1O00213 710 aa20.53■□□□□ 0.88
POLR2E-201ENST00000215587 MMP10P09238 476 aa20.53■□□□□ 0.88
POLR2E-201ENST00000215587 NUCB1Q02818 461 aa20.53■□□□□ 0.88
POLR2E-201ENST00000215587 TAF7LQ5H9L4 462 aa20.53■□□□□ 0.88
POLR2E-201ENST00000215587 ANKRD45Q5TZF3 282 aa20.53■□□□□ 0.88
POLR2E-201ENST00000215587 PRR5LQ6MZQ0 368 aa20.53■□□□□ 0.88
POLR2E-201ENST00000215587 PA2G4Q9UQ80 394 aaKnown RBP20.53■□□□□ 0.88
POLR2E-201ENST00000215587 NOP58Q9Y2X3 529 aaKnown RBP20.53■□□□□ 0.88
POLR2E-201ENST00000215587 MYH3P11055 1940 aa20.53■□□□□ 0.88
POLR2E-201ENST00000215587 ANKRD18BA2A2Z9 1011 aa20.52■□□□□ 0.88
POLR2E-201ENST00000215587 RFX5P48382 616 aaPredicted RBP20.52■□□□□ 0.88
POLR2E-201ENST00000215587 G3BP1Q13283 466 aaKnown RBP eCLIP20.52■□□□□ 0.88
POLR2E-201ENST00000215587 GPR162Q16538 588 aa20.52■□□□□ 0.88
POLR2E-201ENST00000215587 ERC1Q8IUD2 1116 aa20.52■□□□□ 0.88
POLR2E-201ENST00000215587 NLRP3Q96P20 1036 aa20.52■□□□□ 0.88
POLR2E-201ENST00000215587 CCDC85AQ96PX6 553 aaPredicted RBP20.52■□□□□ 0.88
POLR2E-201ENST00000215587 GREM2Q9H772 168 aa20.52■□□□□ 0.88
POLR2E-201ENST00000215587 COPRSQ9NQ92 184 aa20.52■□□□□ 0.88
POLR2E-201ENST00000215587 RTL9Q8NET4 1388 aa20.51■□□□□ 0.87
POLR2E-201ENST00000215587 ITGA6P23229 1130 aa20.51■□□□□ 0.87
POLR2E-201ENST00000215587 PTPN12Q05209 780 aaKnown RBP20.51■□□□□ 0.87
POLR2E-201ENST00000215587 CHD1LQ86WJ1 897 aa20.51■□□□□ 0.87
POLR2E-201ENST00000215587 LRRCC1Q9C099 1032 aa20.51■□□□□ 0.87
POLR2E-201ENST00000215587 SIL1Q9H173 461 aa20.51■□□□□ 0.87
POLR2E-201ENST00000215587 GOLGB1Q14789 3259 aaKnown RBP20.5■□□□□ 0.87
POLR2E-201ENST00000215587 SF3B3Q15393 1217 aaKnown RBP20.5■□□□□ 0.87
POLR2E-201ENST00000215587 CCDC24Q8N4L8 307 aa20.5■□□□□ 0.87
POLR2E-201ENST00000215587 KLHDC4Q8TBB5 520 aa20.49■□□□□ 0.87
POLR2E-201ENST00000215587 KIF1BPQ96EK5 621 aa20.49■□□□□ 0.87
POLR2E-201ENST00000215587 LNPKQ9C0E8 428 aa20.48■□□□□ 0.87
POLR2E-201ENST00000215587 FBXO3Q9UK99 471 aa20.48■□□□□ 0.87
POLR2E-201ENST00000215587 NRXN2Q9P2S2 1712 aa20.47■□□□□ 0.87
POLR2E-201ENST00000215587 C3orf67Q6ZVT6 689 aa20.47■□□□□ 0.87
POLR2E-201ENST00000215587 RHPN1Q8TCX5 695 aa20.47■□□□□ 0.87
POLR2E-201ENST00000215587 ZNF594Q96JF6 807 aaPredicted RBP20.47■□□□□ 0.87
POLR2E-201ENST00000215587 CDC5LQ99459 802 aaKnown RBP20.47■□□□□ 0.87
POLR2E-201ENST00000215587 TNRC6CQ9HCJ0 1690 aaKnown RBP20.46■□□□□ 0.87
POLR2E-201ENST00000215587 EYA2O00167 538 aa20.46■□□□□ 0.87
POLR2E-201ENST00000215587 CIAO1O76071 339 aa20.46■□□□□ 0.87
POLR2E-201ENST00000215587 PELP1Q8IZL8 1130 aaKnown RBP20.46■□□□□ 0.87
POLR2E-201ENST00000215587 SMARCA5O60264 1052 aaPredicted RBP20.45■□□□□ 0.86
POLR2E-201ENST00000215587 IL15P40933 162 aaPredicted RBP20.45■□□□□ 0.86
POLR2E-201ENST00000215587 BRIP1Q9BX63 1249 aa20.45■□□□□ 0.86
POLR2E-201ENST00000215587 BCL11AQ9H165 835 aa20.45■□□□□ 0.86
POLR2E-201ENST00000215587 IGHMBP2P38935 993 aaKnown RBP20.44■□□□□ 0.86
POLR2E-201ENST00000215587 RGS3P49796 1198 aa20.44■□□□□ 0.86
POLR2E-201ENST00000215587 LDHAL6AQ6ZMR3 332 aa20.44■□□□□ 0.86
POLR2E-201ENST00000215587 DDX46Q7L014 1031 aaKnown RBP20.44■□□□□ 0.86
POLR2E-201ENST00000215587 RPGRQ92834 1020 aaKnown RBP20.44■□□□□ 0.86
POLR2E-201ENST00000215587 SEC31BQ9NQW1 1179 aa20.44■□□□□ 0.86
POLR2E-201ENST00000215587 ANKRD18AQ8IVF6 992 aa20.43■□□□□ 0.86
POLR2E-201ENST00000215587 CLASRPQ8N2M8 674 aaKnown RBP20.43■□□□□ 0.86
POLR2E-201ENST00000215587 MPHOSPH8Q99549 860 aa20.43■□□□□ 0.86
POLR2E-201ENST00000215587 IL1RAPL2Q9NP60 686 aa20.43■□□□□ 0.86
POLR2E-201ENST00000215587 CNNM1Q9NRU3 951 aa20.43■□□□□ 0.86
POLR2E-201ENST00000215587 SASH1O94885 1247 aa20.42■□□□□ 0.86
POLR2E-201ENST00000215587 PDE6BP35913 854 aa20.42■□□□□ 0.86
POLR2E-201ENST00000215587 LRRC24Q50LG9 513 aa20.42■□□□□ 0.86
POLR2E-201ENST00000215587 ATG9AQ7Z3C6 839 aa20.42■□□□□ 0.86
POLR2E-201ENST00000215587 SKAP1Q86WV1 359 aa20.42■□□□□ 0.86
POLR2E-201ENST00000215587 PUS3Q9BZE2 481 aaKnown RBP20.42■□□□□ 0.86
POLR2E-201ENST00000215587 PDE4AP27815 886 aa20.41■□□□□ 0.86
POLR2E-201ENST00000215587 POLD1P28340 1107 aa20.41■□□□□ 0.86
POLR2E-201ENST00000215587 TFCP2Q12800 502 aa20.41■□□□□ 0.86
POLR2E-201ENST00000215587 CRY2Q49AN0 593 aa20.41■□□□□ 0.86
POLR2E-201ENST00000215587 CEP126Q9P2H0 1117 aa20.41■□□□□ 0.86
POLR2E-201ENST00000215587 KLRG2A4D1S0 409 aaPredicted RBP20.4■□□□□ 0.86
POLR2E-201ENST00000215587 RBM17Q96I25 401 aaKnown RBP20.4■□□□□ 0.86
POLR2E-201ENST00000215587 METTL24Q5JXM2 366 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms