RNA–Protein interactions for RNA: ENST00000209728.8

CDC6-201, Transcript of cell division cycle 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC6, Length 4,810 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6-201ENST00000209728 UHRF1BP1LA0JNW5 1464 aa14.65□□□□□ -0.06
CDC6-201ENST00000209728 MARCKSP29966 332 aaPredicted RBP14.65□□□□□ -0.06
CDC6-201ENST00000209728 SYKP43405 635 aa14.65□□□□□ -0.06
CDC6-201ENST00000209728 CCDC102BQ68D86 513 aa14.65□□□□□ -0.06
CDC6-201ENST00000209728 MRPS27Q92552 414 aaKnown RBP14.65□□□□□ -0.06
CDC6-201ENST00000209728 CTCFLQ8NI51 663 aaPredicted RBP14.64□□□□□ -0.07
CDC6-201ENST00000209728 ZNF445P59923 1031 aa14.64□□□□□ -0.07
CDC6-201ENST00000209728 LUC7LQ9NQ29 371 aaKnown RBP14.64□□□□□ -0.07
CDC6-201ENST00000209728 NUTM2BA6NNL0 878 aaPredicted RBP14.64□□□□□ -0.07
CDC6-201ENST00000209728 NUTM2EB1AL46 878 aaPredicted RBP14.64□□□□□ -0.07
CDC6-201ENST00000209728 GADD45BO75293 160 aaPredicted RBP14.64□□□□□ -0.07
CDC6-201ENST00000209728 GNG11P61952 73 aa14.64□□□□□ -0.07
CDC6-201ENST00000209728 PKP1Q13835 747 aa14.64□□□□□ -0.07
CDC6-201ENST00000209728 NUTM2AQ8IVF1 878 aaPredicted RBP14.64□□□□□ -0.07
CDC6-201ENST00000209728 KDM5CP41229 1560 aa14.64□□□□□ -0.07
CDC6-201ENST00000209728 IQCA1Q86XH1 822 aa14.63□□□□□ -0.07
CDC6-201ENST00000209728 USP5P45974 858 aa14.63□□□□□ -0.07
CDC6-201ENST00000209728 APOBRQ0VD83 1088 aa14.63□□□□□ -0.07
CDC6-201ENST00000209728 TMEM63CQ9P1W3 806 aa14.63□□□□□ -0.07
CDC6-201ENST00000209728 CCDC171Q6TFL3 1326 aa14.63□□□□□ -0.07
CDC6-201ENST00000209728 LMOD1P29536 600 aaPredicted RBP14.63□□□□□ -0.07
CDC6-201ENST00000209728 UBASH3AP57075 661 aa14.63□□□□□ -0.07
CDC6-201ENST00000209728 C17orf53Q8N3J3 647 aaPredicted RBP14.63□□□□□ -0.07
CDC6-201ENST00000209728 CHAMP1Q96JM3 812 aa14.63□□□□□ -0.07
CDC6-201ENST00000209728 NUP88Q99567 741 aaPredicted RBP14.63□□□□□ -0.07
CDC6-201ENST00000209728 JAKMIP3Q5VZ66 844 aa14.63□□□□□ -0.07
CDC6-201ENST00000209728 SNX14Q9Y5W7 946 aa14.63□□□□□ -0.07
CDC6-201ENST00000209728 MAP3K5Q99683 1374 aa14.63□□□□□ -0.07
CDC6-201ENST00000209728 ABCA5Q8WWZ7 1642 aa14.63□□□□□ -0.07
CDC6-201ENST00000209728 SLC5A1P13866 664 aa14.62□□□□□ -0.07
CDC6-201ENST00000209728 CCDC148Q8NFR7 591 aa14.62□□□□□ -0.07
CDC6-201ENST00000209728 ALG1Q9BT22 464 aa14.62□□□□□ -0.07
CDC6-201ENST00000209728 ODF2Q5BJF6 829 aa14.62□□□□□ -0.07
CDC6-201ENST00000209728 NFATC2IPQ8NCF5 419 aa14.62□□□□□ -0.07
CDC6-201ENST00000209728 GAS2L3Q86XJ1 694 aa14.62□□□□□ -0.07
CDC6-201ENST00000209728 KCNG4Q8TDN1 519 aa14.62□□□□□ -0.07
CDC6-201ENST00000209728 BICC1Q9H694 974 aaKnown RBP14.62□□□□□ -0.07
CDC6-201ENST00000209728 DNAI1Q9UI46 699 aa14.62□□□□□ -0.07
CDC6-201ENST00000209728 CAVIN4Q5BKX8 364 aa14.62□□□□□ -0.07
CDC6-201ENST00000209728 CCDC150Q8NCX0 1101 aa14.62□□□□□ -0.07
CDC6-201ENST00000209728 KLHDC4Q8TBB5 520 aa14.62□□□□□ -0.07
CDC6-201ENST00000209728 CRACR2AQ9BSW2 395 aa14.62□□□□□ -0.07
CDC6-201ENST00000209728 NBPF7P0C2Y1 421 aaPredicted RBP14.61□□□□□ -0.07
CDC6-201ENST00000209728 HSP90AB3PQ58FF7 597 aa14.61□□□□□ -0.07
CDC6-201ENST00000209728 MKNK2Q9HBH9 465 aa14.61□□□□□ -0.07
CDC6-201ENST00000209728 BMP2KQ9NSY1 1161 aaPredicted RBP14.61□□□□□ -0.07
CDC6-201ENST00000209728 SGSM2O43147 1006 aa14.61□□□□□ -0.07
CDC6-201ENST00000209728 TFCP2Q12800 502 aa14.61□□□□□ -0.07
CDC6-201ENST00000209728 RNF41Q9H4P4 317 aaPredicted RBP14.61□□□□□ -0.07
CDC6-201ENST00000209728 PAG1Q9NWQ8 432 aa14.61□□□□□ -0.07
CDC6-201ENST00000209728 EIF4G3O43432 1585 aaKnown RBP14.61□□□□□ -0.07
CDC6-201ENST00000209728 GOLGA6L10A6NI86 522 aa14.61□□□□□ -0.07
CDC6-201ENST00000209728 GTF2F1P35269 517 aaKnown RBP eCLIP14.61□□□□□ -0.07
CDC6-201ENST00000209728 NLRP5P59047 1200 aa14.61□□□□□ -0.07
CDC6-201ENST00000209728 PTPDC1A2A3K4 754 aa14.61□□□□□ -0.07
CDC6-201ENST00000209728 MFSD6Q6ZSS7 791 aa14.61□□□□□ -0.07
CDC6-201ENST00000209728 IGSF3O75054 1194 aa14.6□□□□□ -0.07
CDC6-201ENST00000209728 HOXC9P31274 260 aa14.6□□□□□ -0.07
CDC6-201ENST00000209728 DNA2P51530 1060 aa14.6□□□□□ -0.07
CDC6-201ENST00000209728 MEX3CQ5U5Q3 659 aaKnown RBP14.6□□□□□ -0.07
CDC6-201ENST00000209728 FAM227BQ96M60 508 aa14.6□□□□□ -0.07
CDC6-201ENST00000209728 USP19O94966 1318 aa14.6□□□□□ -0.07
CDC6-201ENST00000209728 ZBTB43O43298 467 aa14.6□□□□□ -0.07
CDC6-201ENST00000209728 GBP3Q9H0R5 595 aa14.6□□□□□ -0.07
CDC6-201ENST00000209728 ABCC4O15439 1325 aa14.6□□□□□ -0.07
CDC6-201ENST00000209728 KIF21AQ7Z4S6 1674 aa14.6□□□□□ -0.07
CDC6-201ENST00000209728 TTF1Q15361 905 aaPredicted RBP14.59□□□□□ -0.07
CDC6-201ENST00000209728 IQCEQ6IPM2 695 aa14.59□□□□□ -0.07
CDC6-201ENST00000209728 CCDC12Q8WUD4 166 aaPredicted RBP14.59□□□□□ -0.07
CDC6-201ENST00000209728 PRC1O43663 620 aa14.59□□□□□ -0.07
CDC6-201ENST00000209728 CATIPQ7Z7H3 387 aa14.59□□□□□ -0.07
CDC6-201ENST00000209728 SPTLC2O15270 562 aa14.59□□□□□ -0.07
CDC6-201ENST00000209728 SPA17Q15506 151 aa14.59□□□□□ -0.07
CDC6-201ENST00000209728 CCDC129Q6ZRS4 1044 aa14.59□□□□□ -0.07
CDC6-201ENST00000209728 ZNF397Q8NF99 534 aaPredicted RBP14.59□□□□□ -0.07
CDC6-201ENST00000209728 CD2BP2O95400 341 aaKnown RBP14.59□□□□□ -0.07
CDC6-201ENST00000209728 IL15P40933 162 aaPredicted RBP14.59□□□□□ -0.07
CDC6-201ENST00000209728 ATP2B3Q16720 1220 aa14.59□□□□□ -0.07
CDC6-201ENST00000209728 MYO6Q9UM54 1294 aa14.59□□□□□ -0.07
CDC6-201ENST00000209728 MBD5Q9P267 1494 aa14.58□□□□□ -0.07
CDC6-201ENST00000209728 ENOX2Q16206 610 aaKnown RBP14.58□□□□□ -0.07
CDC6-201ENST00000209728 SLC9C2Q5TAH2 1124 aa14.58□□□□□ -0.07
CDC6-201ENST00000209728 KIAA0754O94854 1291 aa14.58□□□□□ -0.08
CDC6-201ENST00000209728 AFMP43652 599 aa14.58□□□□□ -0.08
CDC6-201ENST00000209728 BMS1Q14692 1282 aaKnown RBP14.58□□□□□ -0.08
CDC6-201ENST00000209728 SLC4A8Q2Y0W8 1093 aa14.58□□□□□ -0.08
CDC6-201ENST00000209728 DHX32Q7L7V1 743 aaKnown RBP14.58□□□□□ -0.08
CDC6-201ENST00000209728 CCDC194A0A1B0GVG4 234 aa14.58□□□□□ -0.08
CDC6-201ENST00000209728 SYCP1Q15431 976 aa14.58□□□□□ -0.08
CDC6-201ENST00000209728 PALD1Q9ULE6 856 aa14.58□□□□□ -0.08
CDC6-201ENST00000209728 IQSEC3Q9UPP2 1182 aaPredicted RBP14.58□□□□□ -0.08
CDC6-201ENST00000209728 RTL1A6NKG5 1358 aa14.58□□□□□ -0.08
CDC6-201ENST00000209728 ZFYP08048 801 aaPredicted RBP14.58□□□□□ -0.08
CDC6-201ENST00000209728 RAD50Q92878 1312 aa14.58□□□□□ -0.08
CDC6-201ENST00000209728 PLEKHF1Q96S99 279 aa14.57□□□□□ -0.08
CDC6-201ENST00000209728 LGR6Q9HBX8 967 aa14.57□□□□□ -0.08
CDC6-201ENST00000209728 BRD1O95696 1058 aa14.57□□□□□ -0.08
CDC6-201ENST00000209728 TXLNBQ8N3L3 684 aa14.57□□□□□ -0.08
CDC6-201ENST00000209728 SEPT11Q9NVA2 429 aaKnown RBP14.57□□□□□ -0.08
CDC6-201ENST00000209728 EDC4Q6P2E9 1401 aaKnown RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms