RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Aox1O54754 1333 aa16.67■□□□□ 0.26
Pcdha1-201ENSMUST00000070797 Gigyf2Q6Y7W8 1291 aaKnown RBP16.67■□□□□ 0.26
Pcdha1-201ENSMUST00000070797 RestQ8VIG1 1082 aa16.67■□□□□ 0.26
Pcdha1-201ENSMUST00000070797 SfpqQ8VIJ6 699 aaKnown RBP16.67■□□□□ 0.26
Pcdha1-201ENSMUST00000070797 Fbxo3Q9DC63 480 aa16.67■□□□□ 0.26
Pcdha1-201ENSMUST00000070797 Specc1lQ2KN98 1118 aaKnown RBP16.67■□□□□ 0.26
Pcdha1-201ENSMUST00000070797 Ccdc157Q5SPX1 718 aa16.67■□□□□ 0.26
Pcdha1-201ENSMUST00000070797 4933428M09RikQ9D3X3 192 aa16.67■□□□□ 0.26
Pcdha1-201ENSMUST00000070797 Ttc41Q692V3 1318 aa16.66■□□□□ 0.26
Pcdha1-201ENSMUST00000070797 Krt8P11679 490 aaKnown RBP16.66■□□□□ 0.26
Pcdha1-201ENSMUST00000070797 L1td1Q587J6 782 aaKnown RBP16.66■□□□□ 0.26
Pcdha1-201ENSMUST00000070797 Ctdp1Q7TSG2 960 aa16.66■□□□□ 0.26
Pcdha1-201ENSMUST00000070797 U2af1l4Q8BGJ9 220 aa16.66■□□□□ 0.26
Pcdha1-201ENSMUST00000070797 Shroom2A2ALU4 1481 aa16.66■□□□□ 0.26
Pcdha1-201ENSMUST00000070797 Snd1Q78PY7 910 aaKnown RBP16.66■□□□□ 0.26
Pcdha1-201ENSMUST00000070797 Wdr3Q8BHB4 942 aaKnown RBP16.66■□□□□ 0.26
Pcdha1-201ENSMUST00000070797 Il1rapl2Q9ERS6 686 aa16.66■□□□□ 0.26
Pcdha1-201ENSMUST00000070797 Letm1Q9Z2I0 738 aa16.66■□□□□ 0.26
Pcdha1-201ENSMUST00000070797 Rasal2E9PW37 1286 aa16.66■□□□□ 0.26
Pcdha1-201ENSMUST00000070797 Ttll12Q3UDE2 639 aa16.66■□□□□ 0.26
Pcdha1-201ENSMUST00000070797 Scaf1Q5U4C3 1256 aaKnown RBP16.66■□□□□ 0.26
Pcdha1-201ENSMUST00000070797 Gbp9Q8BTS3 619 aa16.66■□□□□ 0.26
Pcdha1-201ENSMUST00000070797 Aimp1P31230 310 aaKnown RBP16.66■□□□□ 0.26
Pcdha1-201ENSMUST00000070797 Kiaa1524Q8BWY9 907 aa16.65■□□□□ 0.26
Pcdha1-201ENSMUST00000070797 Ubxn1Q922Y1 297 aa16.65■□□□□ 0.26
Pcdha1-201ENSMUST00000070797 Metap2O08663 478 aaKnown RBP16.65■□□□□ 0.26
Pcdha1-201ENSMUST00000070797 Cpsf2O35218 782 aaKnown RBP16.65■□□□□ 0.26
Pcdha1-201ENSMUST00000070797 Nop53Q8BK35 484 aaKnown RBP16.65■□□□□ 0.26
Pcdha1-201ENSMUST00000070797 Ift74Q8BKE9 600 aa16.65■□□□□ 0.26
Pcdha1-201ENSMUST00000070797 Sept14Q9DA97 430 aa16.65■□□□□ 0.26
Pcdha1-201ENSMUST00000070797 Mcmdc2E9Q956 681 aa16.64■□□□□ 0.26
Pcdha1-201ENSMUST00000070797 Cep63Q3UPP8 700 aa16.64■□□□□ 0.26
Pcdha1-201ENSMUST00000070797 RragbQ6NTA4 374 aa16.64■□□□□ 0.26
Pcdha1-201ENSMUST00000070797 Magi1Q6RHR9 1471 aa16.64■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 MmeQ61391 750 aa16.64■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Zpr1Q62384 459 aa16.64■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Morc2aQ69ZX6 1030 aa16.64■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Rnf41Q8BH75 317 aa16.64■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Ppp6r3Q922D4 844 aa16.64■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Znf704Q9ERQ3 566 aa16.64■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Pde3aQ9Z0X4 1141 aa16.64■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 1700006A11RikB9EHI3 544 aa16.64■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 ZfxP17012 799 aa16.64■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Gas8Q60779 478 aa16.64■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Dclk3Q8BWQ5 790 aa16.64■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 AmfrQ9R049 643 aa16.64■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Aplp1Q03157 653 aa16.64■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Eif2aQ8BJW6 581 aaKnown RBP16.64■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Hook3Q8BUK6 718 aa16.64■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Tagap1P0CAX8 505 aa16.63■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Ncbp1Q3UYV9 790 aaKnown RBP16.63■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Fgfr1opQ66JX5 399 aa16.63■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Larp1bA0A0A6YXJ7 370 aaKnown RBP16.63■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Cyb5rlB1AS42 316 aa16.63■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Zfpm1O35615 995 aa16.63■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Ccdc38Q8CDN8 563 aa16.63■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Frat2Q8K025 231 aa16.63■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Flad1Q8R123 492 aa16.63■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Trappc8E9PWG2 1437 aa16.63■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Ces1hD3Z298 562 aa16.63■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Trim34bJ3QNR8 485 aa16.63■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Sf3b2Q3UJB0 878 aaKnown RBP16.63■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Fkbp5Q64378 456 aa16.63■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Gimap6Q8K349 305 aa16.63■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Rrs1Q9CYH6 365 aaKnown RBP16.63■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Tex14Q7M6U3 1450 aa16.63■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 EmbP21995 330 aa16.63■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Ttc12Q8BW49 704 aa16.63■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Antxr1Q9CZ52 562 aa16.63■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Syce1Q9D495 329 aa16.63■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 TnnQ80Z71 1560 aa16.63■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Atp1a2Q6PIE5 1020 aa16.63■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Maip1Q8BHE8 291 aa16.63■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Nsfl1cQ9CZ44 370 aaKnown RBP16.63■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Zscan22Q8BGS5 496 aa16.62■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Efcab8Q8C9R9 203 aa16.62■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 NapbP28663 298 aa16.62■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Krt222Q8CCX5 294 aa16.62■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Gm10378F6XQQ1 160 aa16.62■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Ddx10Q80Y44 875 aaKnown RBP16.62■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Efcc1Q9JJF6 558 aa16.62■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Ttc21bQ0HA38 1315 aa16.62■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Agbl1Q09M05 972 aa16.62■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Lrsam1Q80ZI6 727 aa16.62■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Traf3ip1Q149C2 625 aa16.61■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Brd2Q7JJ13 798 aaKnown RBP16.61■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Afap1Q80YS6 731 aa16.61■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Tmx1Q8VBT0 278 aa16.61■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Lrrfip2Q91WK0 415 aa16.61■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 BrapQ99MP8 591 aa16.61■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Hsf2bpQ9D4G2 338 aa16.61■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Cnpy2Q9QXT0 182 aa16.61■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Rfc1P35601 1131 aa16.61■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Cct5P80316 541 aaKnown RBP16.61■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Tbc1d2bQ3U0J8 965 aa16.61■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 SyncQ9EPM5 470 aa16.61■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Ifit2Q64112 472 aa16.61■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Rimbp2Q80U40 1072 aa16.61■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Arhgef18Q6P9R4 1021 aa16.6■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Kif5cP28738 956 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 13.6 ms