RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Dhx8A2A4P0 1244 aaKnown RBP9.97□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Cep55Q8BT07 462 aa9.97□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Mylk2Q8VCR8 613 aa9.97□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Babam1Q3UI43 333 aa9.96□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Ccdc66Q6NS45 935 aa9.96□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Klc3Q91W40 508 aa9.96□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Speer4dL7N216 212 aa9.96□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Atp2b3Q0VF55 1220 aa9.96□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Ddx17Q501J6 650 aaKnown RBP9.96□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Polr3gQ6NXY9 223 aa9.96□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Wasf1Q8R5H6 559 aa9.96□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 BrapQ99MP8 591 aa9.96□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Cavin1O54724 392 aa9.96□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Mtmr3Q8K296 1196 aa9.96□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 GptQ8QZR5 496 aa9.96□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Ehd4Q9EQP2 541 aa9.96□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 TrdnE9Q9K5 693 aa9.96□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 EspnlQ3UYR4 1005 aa9.96□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Atp8a2P98200 1148 aa9.95□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Pnpla7A2AJ88 1352 aa9.95□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Eva1cP58659 440 aa9.95□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Slf2Q6P9P0 1278 aa9.95□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 AbraQ8BUZ1 375 aa9.95□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Nup153E9Q3G8 1462 aaKnown RBP9.95□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Parp14Q2EMV9 1817 aa9.95□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Ehmt1Q5DW34 1296 aa9.95□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Bms1Q6PGF5 1284 aaKnown RBP9.95□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Kdm4aQ8BW72 1064 aa9.95□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Ttc14Q9CSP9 761 aa9.95□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Mctp1E9PV86 951 aa9.95□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 FosbP13346 338 aa9.95□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 NfkbibQ60778 359 aa9.95□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Smc2Q8CG48 1191 aaKnown RBP9.95□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Ccar2Q8VDP4 922 aaKnown RBP9.95□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 C3P01027 1663 aa9.95□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Cyp7a1Q64505 503 aa9.95□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Ltv1Q6NSQ7 470 aaKnown RBP9.95□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Lrrfip2Q91WK0 415 aa9.95□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Ciao1Q99KN2 339 aa9.95□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 UvssaQ9D479 717 aa9.95□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Kif20bQ80WE4 1774 aaKnown RBP9.94□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Cdhr2E9Q7P9 1308 aa9.94□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Slc7a3P70423 618 aa9.94□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Cdca8Q8BHX3 289 aa9.94□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Vps54Q5SPW0 977 aa9.94□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Hnrnpul1Q8VDM6 859 aaKnown RBP9.94□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Cyp2d11P24457 504 aa9.94□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 C5P06684 1680 aa9.94□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Trim30aP15533 496 aa9.94□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Ets1P27577 440 aa9.94□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Hmgb2P30681 210 aaKnown RBP9.94□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 LyarQ08288 388 aaKnown RBP9.94□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 PigbQ9JJQ0 542 aa9.94□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Pik3c2aQ61194 1686 aa9.93□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Ripor2Q80U16 1078 aa9.93□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 D430041D05RikF6ZGR6 1678 aa9.93□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Npc1l1Q6T3U4 1333 aa9.93□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Ttll7A4Q9F0 912 aa9.93□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Ms4a2P20490 235 aa9.93□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Gadd45bP22339 160 aa9.93□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Col14a1Q80X19 1797 aa9.93□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Nrxn3Q6P9K9 1571 aa9.93□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Cyb5rlB1AS42 316 aa9.93□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Kank4Q6P9J5 1016 aa9.93□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Edc3Q8K2D3 508 aaKnown RBP9.93□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Gm21969J3QJZ1 289 aa9.93□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Fam228bQ497Q6 232 aa9.93□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Ncaph2Q8BSP2 607 aa9.93□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 TsksO54887 585 aa9.93□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Il4rP16382 810 aa9.93□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Pde4bB1AWC9 736 aa9.92□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Paxip1Q6NZQ4 1056 aa9.92□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Rnf41Q8BH75 317 aa9.92□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Dis3l2Q8CI75 870 aaKnown RBP9.92□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 TnksQ6PFX9 1320 aa9.92□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Esyt1Q3U7R1 1092 aaKnown RBP9.92□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Cops6O88545 324 aa9.92□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 FanccP50652 591 aa9.92□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Cep131Q62036 1060 aa9.92□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Zkscan7E9PVW1 718 aa9.92□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Pcdh10E9PXQ7 1057 aa9.92□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 NapbP28663 298 aa9.92□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Hvcn1Q3U2S8 269 aa9.92□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Ifit1bl2Q3U687 466 aa9.92□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Tmc2Q8R4P4 888 aa9.92□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 DccP70211 1447 aa9.92□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Trpm3Q5F4S9 1721 aa9.92□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 DbnlQ62418 436 aa9.91□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Pard3Q99NH2 1333 aa9.91□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Trim29Q8R2Q0 587 aa9.91□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Lrrc59Q922Q8 307 aaKnown RBP9.91□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 MypnQ5DTJ9 1315 aa9.91□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Ano1Q8BHY3 960 aa9.91□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Ppm1mQ8BU27 406 aa9.91□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Pm20d1Q8C165 503 aa9.91□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Adamtsl3G3UXC7 1706 aa9.91□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Izumo3A6PWV3 263 aa9.91□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Ccdc162pQ0VG85 912 aa9.91□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Sik1Q60670 779 aa9.91□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Tceanc2Q8R2M0 207 aa9.91□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 10.6 ms