RNA–Protein interactions for RNA: ENSMUST00000022327.12

Ldb3-201, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ldb3, Length 5,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-201ENSMUST00000022327 Triml1Q8BVP1 470 aa14.11□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Cyb5rlB1AS42 316 aa14.1□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Tyro3P55144 880 aa14.1□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Ift88Q61371 824 aa14.1□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Ifit2Q64112 472 aa14.1□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Ak2Q9WTP6 239 aa14.1□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Stx8O88983 236 aa14.1□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Ccdc162pQ0VG85 912 aa14.1□□□□□ -0.15
Ldb3-201ENSMUST00000022327 IqcgQ80W32 419 aa14.1□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Kdm4cQ8VCD7 1054 aa14.1□□□□□ -0.15
Ldb3-201ENSMUST00000022327 RarsQ9D0I9 660 aaKnown RBP14.1□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Znf518aB2RRF6 1478 aaKnown RBP14.1□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Pet2A2AHY8 747 aa14.1□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Tubb4bP68372 445 aaKnown RBP14.1□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Sptlc2P97363 560 aaKnown RBP14.1□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Exoc8Q6PGF7 716 aa14.1□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Fez2Q6TYB5 348 aa14.1□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Mast1Q9R1L5 1570 aa14.1□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Calm1P0DP26 149 aaKnown RBP14.1□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Calm2P0DP27 149 aaKnown RBP14.1□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Calm3P0DP28 149 aaKnown RBP14.1□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Rbm26Q6NZN0 1012 aaKnown RBP14.1□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Ccdc12Q8R344 166 aaKnown RBP14.1□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Nsd3Q6P2L6 1439 aa14.09□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Dennd3A2RT67 1274 aa14.09□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Nfxl1E9Q8I7 918 aaKnown RBP14.09□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Mmp8O70138 465 aa14.09□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Sugp2Q8CH09 1067 aa14.09□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Bicc1Q99MQ1 977 aaKnown RBP14.09□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Klhl10Q9D5V2 608 aa14.09□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Syt10Q9R0N4 523 aa14.09□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Vps18Q8R307 973 aa14.09□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Zbtb3Q91X45 518 aa14.09□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Abcc1O35379 1528 aa14.09□□□□□ -0.15
Ldb3-201ENSMUST00000022327 TrdnE9Q9K5 693 aa14.09□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Eya1P97767 591 aa14.09□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Tceanc2Q8R2M0 207 aa14.09□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Vps16Q920Q4 839 aa14.09□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Chd1lQ9CXF7 900 aa14.09□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Dnajc10Q9DC23 793 aa14.09□□□□□ -0.15
Ldb3-201ENSMUST00000022327 NpcdF8VQB8 469 aa14.08□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Ssrp1Q08943 708 aaKnown RBP14.08□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Klhl30Q8C3F7 581 aa14.08□□□□□ -0.16
Ldb3-201ENSMUST00000022327 DymQ8CHY3 669 aa14.08□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Zfp853A0A1D5RM95 733 aa14.08□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Slc4a4O88343 1079 aa14.08□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Tmx3Q8BXZ1 456 aa14.08□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Nup160Q9Z0W3 1402 aaKnown RBP14.08□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Sh3d21Q7TSG5 549 aa14.08□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Slc5a4bQ91ZP4 660 aa14.08□□□□□ -0.16
Ldb3-201ENSMUST00000022327 MthfsQ9D110 203 aa14.08□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Gli2Q0VGT2 1544 aa14.08□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Pa2g4P50580 394 aaKnown RBP14.07□□□□□ -0.16
Ldb3-201ENSMUST00000022327 CebpzP53569 1052 aaKnown RBP14.07□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Fmn2Q9JL04 1578 aa14.07□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Zkscan16A2ALW2 728 aa14.07□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Ccdc121E9Q6D3 323 aa14.07□□□□□ -0.16
Ldb3-201ENSMUST00000022327 RragbQ6NTA4 374 aa14.07□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Nop53Q8BK35 484 aaKnown RBP14.07□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Map3k19E9Q3S4 1311 aa14.07□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Tex14Q7M6U3 1450 aa14.07□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Bbof1Q3V079 533 aa14.06□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Utp18Q5SSI6 552 aaKnown RBP14.06□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Tmem143Q8VD26 458 aa14.06□□□□□ -0.16
Ldb3-201ENSMUST00000022327 DmtnQ9WV69 405 aa14.06□□□□□ -0.16
Ldb3-201ENSMUST00000022327 ThemisQ8BGW0 636 aa14.06□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Znf18Q810A1 556 aa14.06□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Gimap5Q8BWF2 308 aa14.06□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Atg3Q9CPX6 314 aa14.06□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Gm45015A0A140LII9 184 aa14.06□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Map2k1P31938 393 aa14.06□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Ccnl1Q52KE7 532 aaKnown RBP14.06□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Ccdc42Q5SV66 316 aa14.06□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Zkscan4Q5SZT6 480 aa14.06□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Gm16486A0A1D5RMD1 1434 aa14.05□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Mdm2P23804 489 aa14.05□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Kcnj4P52189 445 aa14.05□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Ctr9Q62018 1173 aaKnown RBP14.05□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Luc7l2Q7TNC4 392 aaKnown RBP14.05□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Ttc12Q8BW49 704 aa14.05□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Tbc1d8Q9Z1A9 1134 aa14.05□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Hoxc9P09633 260 aa14.05□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Usp5P56399 858 aaKnown RBP14.05□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Clul1Q3ZRW6 464 aa14.05□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Dmrt2Q8BG36 561 aa14.05□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Haus2Q9CQS9 234 aa14.05□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Prm3Q62100 101 aa14.05□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Smc1aQ9CU62 1233 aaKnown RBP14.05□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Gm7347D3YYI9 267 aa14.04□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Speer4aF8VPX6 267 aa14.04□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Smarcc1P97496 1104 aa14.04□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Morc2aQ69ZX6 1030 aa14.04□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Ift122Q6NWV3 1182 aa14.04□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Ranbp6Q8BIV3 1105 aa14.04□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Vps36Q91XD6 386 aa14.04□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Setdb1O88974 1307 aa14.04□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Kiaa1524Q8BWY9 907 aa14.04□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Fam76aQ922G2 307 aa14.04□□□□□ -0.16
Ldb3-201ENSMUST00000022327 Dydc2Q9D3X8 139 aa14.04□□□□□ -0.16
Ldb3-201ENSMUST00000022327 AdnpQ9Z103 1108 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 10.8 ms