RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, human

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-223	ENST00000641597	HHEX	Q03014	270 aa		15.43	■□□□□ 0.06
PHGDH-223	ENST00000641597	STX4	Q12846	297 aa		15.43	■□□□□ 0.06
PHGDH-223	ENST00000641597	ZNF321P	Q8N8H1	164 aa		15.43	■□□□□ 0.06
PHGDH-223	ENST00000641597	ZNF511	Q8NB15	262 aa		15.43	■□□□□ 0.06
PHGDH-223	ENST00000641597	OR11H7	Q8NGC8	314 aa		15.43	■□□□□ 0.06
PHGDH-223	ENST00000641597	ZFAND1	Q8TCF1	268 aa		15.43	■□□□□ 0.06
PHGDH-223	ENST00000641597	RBM18	Q96H35	190 aa	Known RBP	15.43	■□□□□ 0.06
PHGDH-223	ENST00000641597	KLHL21	Q9UJP4	597 aa		15.43	■□□□□ 0.06
PHGDH-223	ENST00000641597	TMEM5	Q9Y2B1	443 aa		15.43	■□□□□ 0.06
PHGDH-223	ENST00000641597	CLDN16	Q9Y5I7	305 aa		15.43	■□□□□ 0.06
PHGDH-223	ENST00000641597	FABP7	O15540	132 aa		15.42	■□□□□ 0.06
PHGDH-223	ENST00000641597	HOXC4	P09017	264 aa	Predicted RBP	15.42	■□□□□ 0.06
PHGDH-223	ENST00000641597	CT45A8	P0DMV1	189 aa		15.42	■□□□□ 0.06
PHGDH-223	ENST00000641597	CT45A9	P0DMV2	189 aa		15.42	■□□□□ 0.06
PHGDH-223	ENST00000641597	SLC6A6	P31641	620 aa		15.42	■□□□□ 0.06
PHGDH-223	ENST00000641597	ATP12A	P54707	1039 aa		15.42	■□□□□ 0.06
PHGDH-223	ENST00000641597	CT45A2	Q5DJT8	189 aa		15.42	■□□□□ 0.06
PHGDH-223	ENST00000641597	HES5	Q5TA89	166 aa		15.42	■□□□□ 0.06
PHGDH-223	ENST00000641597	RLN3	Q8WXF3	142 aa		15.42	■□□□□ 0.06
PHGDH-223	ENST00000641597	SNAPC3	Q92966	411 aa		15.42	■□□□□ 0.06
PHGDH-223	ENST00000641597	POT1	Q9NUX5	634 aa		15.42	■□□□□ 0.06
PHGDH-223	ENST00000641597	TRBV2	A0A0J9YWF9	115 aa		15.42	■□□□□ 0.06
PHGDH-223	ENST00000641597		A0A1B0GTH9	108 aa		15.42	■□□□□ 0.06
PHGDH-223	ENST00000641597		H7C1C5	153 aa		15.42	■□□□□ 0.06
PHGDH-223	ENST00000641597	EPX	P11678	715 aa		15.42	■□□□□ 0.06
PHGDH-223	ENST00000641597	GAL	P22466	123 aa		15.42	■□□□□ 0.06
PHGDH-223	ENST00000641597	NRG3	P56975	720 aa		15.42	■□□□□ 0.06
PHGDH-223	ENST00000641597	RAB38	P57729	211 aa		15.42	■□□□□ 0.06
PHGDH-223	ENST00000641597	LCN6	P62502	163 aa		15.42	■□□□□ 0.06
PHGDH-223	ENST00000641597		Q6ZS52	159 aa		15.42	■□□□□ 0.06
PHGDH-223	ENST00000641597	NANOGNB	Q7Z5D8	188 aa		15.42	■□□□□ 0.06
PHGDH-223	ENST00000641597	GPALPP1	Q8IXQ4	340 aa		15.42	■□□□□ 0.06
PHGDH-223	ENST00000641597	OR51Q1	Q8NH59	317 aa		15.42	■□□□□ 0.06
PHGDH-223	ENST00000641597	C16orf52	Q8NHV5	167 aa		15.42	■□□□□ 0.06
PHGDH-223	ENST00000641597	GPBAR1	Q8TDU6	330 aa		15.42	■□□□□ 0.06
PHGDH-223	ENST00000641597	SNX33	Q8WV41	574 aa		15.42	■□□□□ 0.06
PHGDH-223	ENST00000641597	YIPF5	Q969M3	257 aa		15.42	■□□□□ 0.06
PHGDH-223	ENST00000641597	CITED4	Q96RK1	184 aa		15.42	■□□□□ 0.06
PHGDH-223	ENST00000641597	S1PR5	Q9H228	398 aa		15.42	■□□□□ 0.06
PHGDH-223	ENST00000641597	ANKRD10	Q9NXR5	420 aa		15.42	■□□□□ 0.06
PHGDH-223	ENST00000641597	CYP8B1	Q9UNU6	501 aa		15.42	■□□□□ 0.06
PHGDH-223	ENST00000641597	ENTPD2	Q9Y5L3	495 aa		15.42	■□□□□ 0.06
PHGDH-223	ENST00000641597	RP1	P56715	2156 aa		15.42	■□□□□ 0.06
PHGDH-223	ENST00000641597	BLOC1S5-TXNDC5	H3BN57	136 aa		15.41	■□□□□ 0.06
PHGDH-223	ENST00000641597	PIN1P1	O15428	100 aa		15.41	■□□□□ 0.06
PHGDH-223	ENST00000641597	SEMA4F	O95754	770 aa		15.41	■□□□□ 0.06
PHGDH-223	ENST00000641597	RBMS1	P29558	406 aa	Known RBP	15.41	■□□□□ 0.06
PHGDH-223	ENST00000641597	PPM1F	P49593	454 aa	Predicted RBP	15.41	■□□□□ 0.06
PHGDH-223	ENST00000641597	NANOS3	P60323	173 aa	Known RBP	15.41	■□□□□ 0.06
PHGDH-223	ENST00000641597	CDK5R1	Q15078	307 aa		15.41	■□□□□ 0.06
PHGDH-223	ENST00000641597	RPL13AP3	Q6NVV1	102 aa		15.41	■□□□□ 0.06
PHGDH-223	ENST00000641597	CBLN3	Q6UW01	205 aa		15.41	■□□□□ 0.06
PHGDH-223	ENST00000641597	SLC35F2	Q8IXU6	374 aa		15.41	■□□□□ 0.06
PHGDH-223	ENST00000641597	GRPEL2	Q8TAA5	225 aa		15.41	■□□□□ 0.06
PHGDH-223	ENST00000641597	LGALS14	Q8TCE9	139 aa		15.41	■□□□□ 0.06
PHGDH-223	ENST00000641597	AKAP1	Q92667	903 aa	Known RBP eCLIP	15.41	■□□□□ 0.06
PHGDH-223	ENST00000641597	HSPA12B	Q96MM6	686 aa		15.41	■□□□□ 0.06
PHGDH-223	ENST00000641597	GFI1	Q99684	422 aa		15.41	■□□□□ 0.06
PHGDH-223	ENST00000641597	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	15.41	■□□□□ 0.06
PHGDH-223	ENST00000641597	OR5K3	A6NET4	321 aa		15.41	■□□□□ 0.06
PHGDH-223	ENST00000641597	TNFRSF10C	O14798	259 aa		15.41	■□□□□ 0.06
PHGDH-223	ENST00000641597	WISP1	O95388	367 aa		15.41	■□□□□ 0.06
PHGDH-223	ENST00000641597	CSTA	P01040	98 aa		15.41	■□□□□ 0.06
PHGDH-223	ENST00000641597	C1QB	P02746	253 aa		15.41	■□□□□ 0.06
PHGDH-223	ENST00000641597	AKT2	P31751	481 aa		15.41	■□□□□ 0.06
PHGDH-223	ENST00000641597	CCR4	P51679	360 aa		15.41	■□□□□ 0.06
PHGDH-223	ENST00000641597	SIRPA	P78324	504 aa		15.41	■□□□□ 0.06
PHGDH-223	ENST00000641597	ZNF687	Q8N1G0	1237 aa		15.41	■□□□□ 0.06
PHGDH-223	ENST00000641597	ARHGEF39	Q8N4T4	335 aa		15.41	■□□□□ 0.06
PHGDH-223	ENST00000641597	CREB3L1	Q96BA8	519 aa		15.41	■□□□□ 0.06
PHGDH-223	ENST00000641597	CNN2	Q99439	309 aa	Known RBP	15.41	■□□□□ 0.06
PHGDH-223	ENST00000641597	CDCP1	Q9H5V8	836 aa		15.41	■□□□□ 0.06
PHGDH-223	ENST00000641597	ING3	Q9NXR8	418 aa		15.41	■□□□□ 0.06
PHGDH-223	ENST00000641597	SLC23A1	Q9UHI7	598 aa		15.41	■□□□□ 0.06
PHGDH-223	ENST00000641597	OR10H1	Q9Y4A9	318 aa		15.41	■□□□□ 0.06
PHGDH-223	ENST00000641597	OR2B3	O76000	313 aa		15.4	■□□□□ 0.06
PHGDH-223	ENST00000641597	RPP14	O95059	124 aa	Known RBP	15.4	■□□□□ 0.06
PHGDH-223	ENST00000641597	GPANK1	O95872	356 aa		15.4	■□□□□ 0.06
PHGDH-223	ENST00000641597	EDNRA	P25101	427 aa		15.4	■□□□□ 0.06
PHGDH-223	ENST00000641597	ERP29	P30040	261 aa	Known RBP	15.4	■□□□□ 0.06
PHGDH-223	ENST00000641597	HTR4	Q13639	388 aa		15.4	■□□□□ 0.06
PHGDH-223	ENST00000641597	CD226	Q15762	336 aa		15.4	■□□□□ 0.06
PHGDH-223	ENST00000641597	CCDC58	Q4VC31	144 aa		15.4	■□□□□ 0.06
PHGDH-223	ENST00000641597	TMEM255A	Q5JRV8	349 aa		15.4	■□□□□ 0.06
PHGDH-223	ENST00000641597	THOC7	Q6I9Y2	204 aa	Known RBP	15.4	■□□□□ 0.06
PHGDH-223	ENST00000641597	ARHGAP11A	Q6P4F7	1023 aa		15.4	■□□□□ 0.06
PHGDH-223	ENST00000641597	LINC00114	Q6XXX2	140 aa		15.4	■□□□□ 0.06
PHGDH-223	ENST00000641597	MCAT	Q8IVS2	390 aa	Known RBP	15.4	■□□□□ 0.06
PHGDH-223	ENST00000641597	ZNF433	Q8N7K0	673 aa	Predicted RBP	15.4	■□□□□ 0.06
PHGDH-223	ENST00000641597	NPEPL1	Q8NDH3	523 aa		15.4	■□□□□ 0.06
PHGDH-223	ENST00000641597		Q96M85	177 aa		15.4	■□□□□ 0.06
PHGDH-223	ENST00000641597	MOGAT1	Q96PD6	335 aa		15.4	■□□□□ 0.06
PHGDH-223	ENST00000641597	MAP3K3	Q99759	626 aa		15.4	■□□□□ 0.06
PHGDH-223	ENST00000641597	NOX4	Q9NPH5	578 aa		15.4	■□□□□ 0.06
PHGDH-223	ENST00000641597	NKIRAS2	Q9NYR9	191 aa		15.4	■□□□□ 0.06
PHGDH-223	ENST00000641597	KLHDC2	Q9Y2U9	406 aa		15.4	■□□□□ 0.06
PHGDH-223	ENST00000641597	DCTN6	O00399	190 aa		15.4	■□□□□ 0.06
PHGDH-223	ENST00000641597	NDUFB2	O95178	105 aa		15.4	■□□□□ 0.06
PHGDH-223	ENST00000641597	TNF	P01375	233 aa		15.4	■□□□□ 0.06
PHGDH-223	ENST00000641597	WNT1	P04628	370 aa		15.4	■□□□□ 0.06

Retrieved 100 of 20,778 RNA–protein pairs in 56 ms