RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 PCCBP05166 539 aa7.73□□□□□ -1.17
NECAP1-227ENST00000640648 STAG3L2P0CL84 134 aa7.73□□□□□ -1.17
NECAP1-227ENST00000640648 UBE2MP61081 183 aaKnown RBP7.73□□□□□ -1.17
NECAP1-227ENST00000640648 COX19Q49B96 90 aa7.73□□□□□ -1.17
NECAP1-227ENST00000640648 C9orf152Q5JTZ5 239 aa7.73□□□□□ -1.17
NECAP1-227ENST00000640648 GLDNQ6ZMI3 551 aaPredicted RBP7.73□□□□□ -1.17
NECAP1-227ENST00000640648 FAM129CQ86XR2 697 aa7.73□□□□□ -1.17
NECAP1-227ENST00000640648 NPAS4Q8IUM7 802 aa7.73□□□□□ -1.17
NECAP1-227ENST00000640648 FAM71E2Q8N5Q1 922 aa7.73□□□□□ -1.17
NECAP1-227ENST00000640648 SLC2A12Q8TD20 617 aa7.73□□□□□ -1.17
NECAP1-227ENST00000640648 HAS2Q92819 552 aa7.73□□□□□ -1.17
NECAP1-227ENST00000640648 FAM122AQ96E09 287 aa7.73□□□□□ -1.17
NECAP1-227ENST00000640648 VAMP8Q9BV40 100 aa7.73□□□□□ -1.17
NECAP1-227ENST00000640648 PRR14Q9BWN1 585 aa7.73□□□□□ -1.17
NECAP1-227ENST00000640648 ARV1Q9H2C2 271 aa7.73□□□□□ -1.17
NECAP1-227ENST00000640648 NWD2Q9ULI1 1742 aa7.73□□□□□ -1.17
NECAP1-227ENST00000640648 A0A1W2PRU2 124 aa7.73□□□□□ -1.17
NECAP1-227ENST00000640648 TCRBV5S2A0A599 114 aa7.73□□□□□ -1.17
NECAP1-227ENST00000640648 MCRIP1C9JLW8 97 aa7.73□□□□□ -1.17
NECAP1-227ENST00000640648 FZD9O00144 591 aa7.73□□□□□ -1.17
NECAP1-227ENST00000640648 NFATC1O95644 943 aa7.73□□□□□ -1.17
NECAP1-227ENST00000640648 EOMESO95936 686 aa7.73□□□□□ -1.17
NECAP1-227ENST00000640648 EDNRBP24530 442 aa7.73□□□□□ -1.17
NECAP1-227ENST00000640648 DAPP51397 102 aa7.73□□□□□ -1.17
NECAP1-227ENST00000640648 SRPXP78539 464 aa7.73□□□□□ -1.17
NECAP1-227ENST00000640648 IL13RA1P78552 427 aa7.73□□□□□ -1.17
NECAP1-227ENST00000640648 NSUN5P2Q63ZY6 315 aa7.73□□□□□ -1.17
NECAP1-227ENST00000640648 NIPAL3Q6P499 406 aa7.73□□□□□ -1.17
NECAP1-227ENST00000640648 CD300LGQ6UXG3 332 aa7.73□□□□□ -1.17
NECAP1-227ENST00000640648 CMTM8Q8IZV2 173 aa7.73□□□□□ -1.17
NECAP1-227ENST00000640648 GABRG1Q8N1C3 465 aa7.73□□□□□ -1.17
NECAP1-227ENST00000640648 ZCCHC10Q8TBK6 192 aa7.73□□□□□ -1.17
NECAP1-227ENST00000640648 PNPLA2Q96AD5 504 aa7.73□□□□□ -1.17
NECAP1-227ENST00000640648 MEGF10Q96KG7 1140 aa7.73□□□□□ -1.17
NECAP1-227ENST00000640648 PLK3Q9H4B4 646 aa7.73□□□□□ -1.17
NECAP1-227ENST00000640648 GSTO2Q9H4Y5 243 aa7.73□□□□□ -1.17
NECAP1-227ENST00000640648 RCE1Q9Y256 329 aa7.73□□□□□ -1.17
NECAP1-227ENST00000640648 LAMB4A4D0S4 1761 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 CTDSPLO15194 276 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 CBX7O95931 251 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 MT-CO2P00403 227 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 PRDX3P30048 256 aaKnown RBP7.72□□□□□ -1.17
NECAP1-227ENST00000640648 SLC6A1P30531 599 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 MEF2AQ02078 507 aaPredicted RBP7.72□□□□□ -1.17
NECAP1-227ENST00000640648 LRRC37A5PQ49AS3 106 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 LIPJQ5W064 366 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 SFXN4Q6P4A7 337 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 CEACAM20Q6UY09 585 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 WDR88Q6ZMY6 472 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 VTCN1Q7Z7D3 282 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 THOC6Q86W42 341 aaKnown RBP7.72□□□□□ -1.17
NECAP1-227ENST00000640648 UMODL1-AS1Q8N2C9 162 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 ZNF738Q8NE65 137 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 CASTOR1Q8WTX7 329 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 RAB8BQ92930 207 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 RERGQ96A58 199 aaPredicted RBP7.72□□□□□ -1.17
NECAP1-227ENST00000640648 OR7D2Q96RA2 312 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 URM1Q9BTM9 101 aaKnown RBP7.72□□□□□ -1.17
NECAP1-227ENST00000640648 OPN3Q9H1Y3 402 aaPredicted RBP7.72□□□□□ -1.17
NECAP1-227ENST00000640648 FN3KRPQ9HA64 309 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 RASL12Q9NYN1 266 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 DEC1Q9P2X7 70 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 ELOA3DA6NLF2 546 aaPredicted RBP7.72□□□□□ -1.17
NECAP1-227ENST00000640648 C6orf47O95873 294 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 MT-ND4P03905 459 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 EPHX1P07099 455 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 CTSEP14091 401 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 NT5EP21589 574 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 CMPK1P30085 196 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 PTGFRP43088 359 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 CDX1P47902 265 aaPredicted RBP7.72□□□□□ -1.17
NECAP1-227ENST00000640648 HNRNPKP61978 463 aaKnown RBP eCLIP7.72□□□□□ -1.17
NECAP1-227ENST00000640648 ELOA3BQ3SY89 546 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 ZNF551Q7Z340 670 aaPredicted RBP7.72□□□□□ -1.17
NECAP1-227ENST00000640648 TMPRSS9Q7Z410 1059 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 ELOA3Q8NG57 546 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 OR56A1Q8NGH5 318 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 KLK6Q92876 244 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 TVP23CQ96ET8 276 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 DEFB118Q96PH6 123 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 RHOFQ9HBH0 211 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 RXFP3Q9NSD7 469 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 TAF1P21675 1872 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 TSPAN11A1L157 253 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 EEF1E1-BLOC1S5C9J1V9 151 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 PRSS23O95084 383 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 GJB5O95377 273 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 HOXB3P14651 431 aaPredicted RBP7.72□□□□□ -1.17
NECAP1-227ENST00000640648 AMD1P17707 334 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 NDUFV2P19404 249 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 BMP5P22003 454 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 BMP8BP34820 402 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 CDKN1CP49918 316 aaPredicted RBP7.72□□□□□ -1.17
NECAP1-227ENST00000640648 HNRNPA3P51991 378 aaKnown RBP7.72□□□□□ -1.17
NECAP1-227ENST00000640648 SIM1P81133 766 aaPredicted RBP7.72□□□□□ -1.17
NECAP1-227ENST00000640648 NAAAQ02083 359 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 ATP6V1FQ16864 119 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 PRR27Q6MZM9 219 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 AGTRAPQ6RW13 159 aa7.72□□□□□ -1.17
NECAP1-227ENST00000640648 SUSD1Q6UWL2 747 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms