RNA–Protein interactions for RNA: ENST00000639439.1

PTPRVP-204, Transcript of protein tyrosine phosphatase, receptor type V, pseudogene, humanhuman

TSL 1 (best)

Gene PTPRVP, Length 821 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRVP-204ENST00000639439 ACAA2P42765 397 aaKnown RBP13.72□□□□□ -0.21
PTPRVP-204ENST00000639439 ATP5J2P56134 94 aa13.72□□□□□ -0.21
PTPRVP-204ENST00000639439 IRX1P78414 480 aaPredicted RBP13.72□□□□□ -0.21
PTPRVP-204ENST00000639439 LTBQ06643 244 aa13.72□□□□□ -0.21
PTPRVP-204ENST00000639439 OR7E24Q6IFN5 339 aa13.72□□□□□ -0.21
PTPRVP-204ENST00000639439 LILRB1Q8NHL6 650 aaPredicted RBP13.72□□□□□ -0.21
PTPRVP-204ENST00000639439 SMAP2Q8WU79 429 aaPredicted RBP13.72□□□□□ -0.21
PTPRVP-204ENST00000639439 SLC35B4Q969S0 331 aa13.72□□□□□ -0.21
PTPRVP-204ENST00000639439 TRMT61AQ96FX7 289 aaKnown RBP13.72□□□□□ -0.21
PTPRVP-204ENST00000639439 AURKBQ96GD4 344 aaPredicted RBP13.72□□□□□ -0.21
PTPRVP-204ENST00000639439 RADILQ96JH8 1075 aa13.72□□□□□ -0.21
PTPRVP-204ENST00000639439 SMR3AQ99954 134 aa13.72□□□□□ -0.21
PTPRVP-204ENST00000639439 CCDC28BQ9BUN5 200 aa13.72□□□□□ -0.21
PTPRVP-204ENST00000639439 SPATA9Q9BWV2 254 aa13.72□□□□□ -0.21
PTPRVP-204ENST00000639439 PAIP1Q9H074 479 aaKnown RBP13.72□□□□□ -0.21
PTPRVP-204ENST00000639439 PIF1Q9H611 641 aa13.72□□□□□ -0.21
PTPRVP-204ENST00000639439 BCL2L10Q9HD36 194 aa13.72□□□□□ -0.21
PTPRVP-204ENST00000639439 PCDHB14Q9Y5E9 798 aa13.72□□□□□ -0.21
PTPRVP-204ENST00000639439 NSD1Q96L73 2696 aaPredicted RBP13.72□□□□□ -0.21
PTPRVP-204ENST00000639439 A0A096LPI6 279 aa13.71□□□□□ -0.21
PTPRVP-204ENST00000639439 A0A1W2PP18 115 aa13.71□□□□□ -0.21
PTPRVP-204ENST00000639439 ZC3H12DA2A288 527 aaKnown RBP13.71□□□□□ -0.21
PTPRVP-204ENST00000639439 A8MVM7 634 aa13.71□□□□□ -0.21
PTPRVP-204ENST00000639439 CLIC1O00299 241 aa13.71□□□□□ -0.21
PTPRVP-204ENST00000639439 RAMP1O60894 148 aa13.71□□□□□ -0.21
PTPRVP-204ENST00000639439 IGHV3-9P01782 118 aa13.71□□□□□ -0.21
PTPRVP-204ENST00000639439 GKN3PP0CG01 181 aa13.71□□□□□ -0.21
PTPRVP-204ENST00000639439 BMP2P12643 396 aa13.71□□□□□ -0.21
PTPRVP-204ENST00000639439 NCF2P19878 526 aaPredicted RBP13.71□□□□□ -0.21
PTPRVP-204ENST00000639439 FAPQ12884 760 aa13.71□□□□□ -0.21
PTPRVP-204ENST00000639439 SLC17A1Q14916 467 aa13.71□□□□□ -0.21
PTPRVP-204ENST00000639439 RGNQ15493 299 aa13.71□□□□□ -0.21
PTPRVP-204ENST00000639439 ETFDHQ16134 617 aa13.71□□□□□ -0.21
PTPRVP-204ENST00000639439 C1QTNF12Q5T7M4 302 aa13.71□□□□□ -0.21
PTPRVP-204ENST00000639439 CASP12Q6UXS9 341 aa13.71□□□□□ -0.21
PTPRVP-204ENST00000639439 CADM2Q8N3J6 435 aa13.71□□□□□ -0.21
PTPRVP-204ENST00000639439 GOLGA6L1Q8N7Z2 621 aa13.71□□□□□ -0.21
PTPRVP-204ENST00000639439 BBS10Q8TAM1 723 aa13.71□□□□□ -0.21
PTPRVP-204ENST00000639439 ATP6V1G3Q96LB4 118 aa13.71□□□□□ -0.21
PTPRVP-204ENST00000639439 SF3B5Q9BWJ5 86 aaKnown RBP13.71□□□□□ -0.21
PTPRVP-204ENST00000639439 TAPBPLQ9BX59 468 aa13.71□□□□□ -0.21
PTPRVP-204ENST00000639439 TRIM2Q9C040 744 aa13.71□□□□□ -0.21
PTPRVP-204ENST00000639439 A4GALTQ9NPC4 353 aa13.71□□□□□ -0.21
PTPRVP-204ENST00000639439 TMEM45AQ9NWC5 275 aa13.71□□□□□ -0.21
PTPRVP-204ENST00000639439 MGAT4BQ9UQ53 548 aa13.71□□□□□ -0.21
PTPRVP-204ENST00000639439 FLVCR1Q9Y5Y0 555 aa13.71□□□□□ -0.21
PTPRVP-204ENST00000639439 TLN2Q9Y4G6 2542 aa13.7□□□□□ -0.22
PTPRVP-204ENST00000639439 CSPG4Q6UVK1 2322 aa13.7□□□□□ -0.22
PTPRVP-204ENST00000639439 LIPT2A6NK58 231 aa13.7□□□□□ -0.22
PTPRVP-204ENST00000639439 C5orf58C9J3I9 102 aa13.7□□□□□ -0.22
PTPRVP-204ENST00000639439 OVOL3O00110 214 aa13.7□□□□□ -0.22
PTPRVP-204ENST00000639439 RAD51DO75771 328 aa13.7□□□□□ -0.22
PTPRVP-204ENST00000639439 DANCRP0C864 163 aa13.7□□□□□ -0.22
PTPRVP-204ENST00000639439 PPIBP23284 216 aaKnown RBP13.7□□□□□ -0.22
PTPRVP-204ENST00000639439 NTF4P34130 210 aa13.7□□□□□ -0.22
PTPRVP-204ENST00000639439 IDH3AP50213 366 aa13.7□□□□□ -0.22
PTPRVP-204ENST00000639439 TGFBR3Q03167 851 aa13.7□□□□□ -0.22
PTPRVP-204ENST00000639439 CEACAM7Q14002 265 aa13.7□□□□□ -0.22
PTPRVP-204ENST00000639439 ZNF311Q5JNZ3 666 aa13.7□□□□□ -0.22
PTPRVP-204ENST00000639439 RPS26P11Q5JNZ5 115 aaPredicted RBP13.7□□□□□ -0.22
PTPRVP-204ENST00000639439 OTUD3Q5T2D3 398 aaPredicted RBP13.7□□□□□ -0.22
PTPRVP-204ENST00000639439 SLC2A7Q6PXP3 512 aa13.7□□□□□ -0.22
PTPRVP-204ENST00000639439 BLOC1S3Q6QNY0 202 aa13.7□□□□□ -0.22
PTPRVP-204ENST00000639439 KLHL17Q6TDP4 642 aa13.7□□□□□ -0.22
PTPRVP-204ENST00000639439 TMEM108Q6UXF1 575 aa13.7□□□□□ -0.22
PTPRVP-204ENST00000639439 ATG4DQ86TL0 474 aaPredicted RBP13.7□□□□□ -0.22
PTPRVP-204ENST00000639439 CLIP4Q8N3C7 705 aa13.7□□□□□ -0.22
PTPRVP-204ENST00000639439 KBTBD8Q8NFY9 601 aa13.7□□□□□ -0.22
PTPRVP-204ENST00000639439 DYDC1Q8WWB3 177 aa13.7□□□□□ -0.22
PTPRVP-204ENST00000639439 GTPBP3Q969Y2 492 aaKnown RBP13.7□□□□□ -0.22
PTPRVP-204ENST00000639439 TMEM45BQ96B21 275 aa13.7□□□□□ -0.22
PTPRVP-204ENST00000639439 MUS81Q96NY9 551 aa13.7□□□□□ -0.22
PTPRVP-204ENST00000639439 GRIP2Q9C0E4 1043 aa13.7□□□□□ -0.22
PTPRVP-204ENST00000639439 SLCO1B3Q9NPD5 702 aa13.7□□□□□ -0.22
PTPRVP-204ENST00000639439 FAIMQ9NVQ4 179 aa13.7□□□□□ -0.22
PTPRVP-204ENST00000639439 UPB1Q9UBR1 384 aa13.7□□□□□ -0.22
PTPRVP-204ENST00000639439 DCTN4Q9UJW0 460 aa13.7□□□□□ -0.22
PTPRVP-204ENST00000639439 ABCA2Q9BZC7 2435 aa13.69□□□□□ -0.22
PTPRVP-204ENST00000639439 TRIM64A6NGJ6 449 aa13.69□□□□□ -0.22
PTPRVP-204ENST00000639439 TRIM64BA6NI03 449 aa13.69□□□□□ -0.22
PTPRVP-204ENST00000639439 AQP7P3A6NL99 342 aa13.69□□□□□ -0.22
PTPRVP-204ENST00000639439 PDLIM1O00151 329 aa13.69□□□□□ -0.22
PTPRVP-204ENST00000639439 ABCD4O14678 606 aa13.69□□□□□ -0.22
PTPRVP-204ENST00000639439 VAMP5O95183 116 aa13.69□□□□□ -0.22
PTPRVP-204ENST00000639439 SOD3P08294 240 aa13.69□□□□□ -0.22
PTPRVP-204ENST00000639439 ETS2P15036 469 aa13.69□□□□□ -0.22
PTPRVP-204ENST00000639439 PTAFRP25105 342 aa13.69□□□□□ -0.22
PTPRVP-204ENST00000639439 OR7A5Q15622 319 aa13.69□□□□□ -0.22
PTPRVP-204ENST00000639439 GABRA6Q16445 453 aa13.69□□□□□ -0.22
PTPRVP-204ENST00000639439 LRIF1Q5T3J3 769 aa13.69□□□□□ -0.22
PTPRVP-204ENST00000639439 CIARTQ8N365 385 aaPredicted RBP13.69□□□□□ -0.22
PTPRVP-204ENST00000639439 C17orf78Q8N4C9 275 aa13.69□□□□□ -0.22
PTPRVP-204ENST00000639439 TMEM99Q8N816 258 aa13.69□□□□□ -0.22
PTPRVP-204ENST00000639439 C1orf162Q8NEQ5 155 aaPredicted RBP13.69□□□□□ -0.22
PTPRVP-204ENST00000639439 OR9K2Q8NGE7 335 aa13.69□□□□□ -0.22
PTPRVP-204ENST00000639439 STK35Q8TDR2 534 aa13.69□□□□□ -0.22
PTPRVP-204ENST00000639439 NEUROG1Q92886 237 aa13.69□□□□□ -0.22
PTPRVP-204ENST00000639439 SPDL1Q96EA4 605 aa13.69□□□□□ -0.22
PTPRVP-204ENST00000639439 AMBRA1Q9C0C7 1298 aa13.69□□□□□ -0.22
PTPRVP-204ENST00000639439 ALG2Q9H553 416 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms