RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 FCRLAQ7L513 359 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 PTOV1Q86YD1 416 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 LCORQ96JN0 433 aaPredicted RBP13.3□□□□□ -0.28
SCARB2-208ENST00000638372 HHATLQ9HCP6 504 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 HS3ST3A1Q9Y663 406 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 TCRBV5S2A0A599 114 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 GGT3PA6NGU5 568 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 DOK2O60496 412 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 LGI1O95970 557 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 GABRA5P31644 462 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 TCTN3Q6NUS6 607 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 FIP1L1Q6UN15 594 aaKnown RBP13.3□□□□□ -0.28
SCARB2-208ENST00000638372 AGBL5Q8NDL9 886 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 ASB12Q8WXK4 309 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 SDF2Q99470 211 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 CACNA1IQ9P0X4 2223 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 IGHV3-20A0A0C4DH32 117 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 ARPC1BO15143 372 aaKnown RBP13.3□□□□□ -0.28
SCARB2-208ENST00000638372 GALR3O60755 368 aaPredicted RBP13.3□□□□□ -0.28
SCARB2-208ENST00000638372 HTR3BO95264 441 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 CEACAM5P06731 702 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 ZNF806P0C7X5 589 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 UBE2UQ5VVX9 321 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 NXNL2Q5VZ03 156 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 BEND4Q6ZU67 534 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 SPAG16Q8N0X2 631 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 SIMC1Q8NDZ2 872 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 OR7G2Q8NG99 324 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 OR52I1Q8NGK6 324 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 SLC35A4Q96G79 324 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 CTRCQ99895 268 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 NT5DC2Q9H857 520 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 HIF3AQ9Y2N7 669 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 hCG_1807616A0A1W2PRN6 198 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 HMX3A6NHT5 357 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 CSO75390 466 aaKnown RBP13.3□□□□□ -0.28
SCARB2-208ENST00000638372 UTS2O95399 124 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 LIPCP11150 499 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 IDUAP35475 653 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 CSNK1A1P48729 337 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 MALLQ13021 153 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 AIMP2Q13155 320 aaKnown RBP13.3□□□□□ -0.28
SCARB2-208ENST00000638372 SF3A2Q15428 464 aaKnown RBP13.3□□□□□ -0.28
SCARB2-208ENST00000638372 SLC22A6Q4U2R8 563 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 SAXO2Q658L1 398 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 DNAJC5GQ8N7S2 189 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 ALG14Q96F25 216 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 HYLS1Q96M11 299 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 CHST8Q9H2A9 424 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 INPP5EQ9NRR6 644 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 MED17Q9NVC6 651 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 SLC39A1Q9NY26 324 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 ICE1Q9Y2F5 2266 aa13.3□□□□□ -0.28
SCARB2-208ENST00000638372 SIGLEC6O43699 453 aa13.29□□□□□ -0.28
SCARB2-208ENST00000638372 ARSBP15848 533 aa13.29□□□□□ -0.28
SCARB2-208ENST00000638372 FPR3P25089 353 aa13.29□□□□□ -0.28
SCARB2-208ENST00000638372 CD27P26842 260 aa13.29□□□□□ -0.28
SCARB2-208ENST00000638372 SLC14A1Q13336 389 aa13.29□□□□□ -0.28
SCARB2-208ENST00000638372 ACSM5Q6NUN0 579 aa13.29□□□□□ -0.28
SCARB2-208ENST00000638372 ZNF836Q6ZNA1 936 aa13.29□□□□□ -0.28
SCARB2-208ENST00000638372 TMEM150AQ86TG1 271 aa13.29□□□□□ -0.28
SCARB2-208ENST00000638372 IL17RCQ8NAC3 791 aa13.29□□□□□ -0.28
SCARB2-208ENST00000638372 OR14A16Q8NHC5 309 aa13.29□□□□□ -0.28
SCARB2-208ENST00000638372 MFSD8Q8NHS3 518 aa13.29□□□□□ -0.28
SCARB2-208ENST00000638372 EDAQ92838 391 aa13.29□□□□□ -0.28
SCARB2-208ENST00000638372 Q96M85 177 aa13.29□□□□□ -0.28
SCARB2-208ENST00000638372 MBOAT4Q96T53 435 aa13.29□□□□□ -0.28
SCARB2-208ENST00000638372 DIMT1Q9UNQ2 313 aaKnown RBP13.29□□□□□ -0.28
SCARB2-208ENST00000638372 CDHR4A6H8M9 788 aa13.29□□□□□ -0.28
SCARB2-208ENST00000638372 SUSD5O60279 629 aa13.29□□□□□ -0.28
SCARB2-208ENST00000638372 CPNE6O95741 557 aa13.29□□□□□ -0.28
SCARB2-208ENST00000638372 KNG1P01042 644 aa13.29□□□□□ -0.28
SCARB2-208ENST00000638372 BSGP35613 385 aa13.29□□□□□ -0.28
SCARB2-208ENST00000638372 SELENOVP59797 346 aa13.29□□□□□ -0.28
SCARB2-208ENST00000638372 SIRPAP78324 504 aa13.29□□□□□ -0.28
SCARB2-208ENST00000638372 AGBL4Q5VU57 503 aa13.29□□□□□ -0.28
SCARB2-208ENST00000638372 TMEM215Q68D42 235 aa13.29□□□□□ -0.28
SCARB2-208ENST00000638372 KDM8Q8N371 416 aa13.29□□□□□ -0.28
SCARB2-208ENST00000638372 NINJ1Q92982 152 aa13.29□□□□□ -0.28
SCARB2-208ENST00000638372 TOMM40LQ969M1 308 aa13.29□□□□□ -0.28
SCARB2-208ENST00000638372 ULBP3Q9BZM4 244 aa13.29□□□□□ -0.28
SCARB2-208ENST00000638372 RNF167Q9H6Y7 350 aa13.29□□□□□ -0.28
SCARB2-208ENST00000638372 NDRG4Q9ULP0 352 aaKnown RBP13.29□□□□□ -0.28
SCARB2-208ENST00000638372 CHP2O43745 196 aa13.29□□□□□ -0.28
SCARB2-208ENST00000638372 CD1CP29017 333 aa13.29□□□□□ -0.28
SCARB2-208ENST00000638372 LRRC28Q86X40 367 aaPredicted RBP13.29□□□□□ -0.28
SCARB2-208ENST00000638372 PFN4Q8NHR9 129 aa13.29□□□□□ -0.28
SCARB2-208ENST00000638372 ZNF587Q96SQ5 575 aaPredicted RBP13.29□□□□□ -0.28
SCARB2-208ENST00000638372 RPP25Q9BUL9 199 aaKnown RBP13.29□□□□□ -0.28
SCARB2-208ENST00000638372 SLC6A20Q9NP91 592 aa13.29□□□□□ -0.28
SCARB2-208ENST00000638372 TUBGCP6Q96RT7 1819 aa13.29□□□□□ -0.28
SCARB2-208ENST00000638372 EFCAB7A8K855 629 aa13.29□□□□□ -0.28
SCARB2-208ENST00000638372 ACOT7O00154 380 aa13.29□□□□□ -0.28
SCARB2-208ENST00000638372 MT-ND4P03905 459 aa13.29□□□□□ -0.28
SCARB2-208ENST00000638372 TMEM244Q5VVB8 128 aa13.29□□□□□ -0.28
SCARB2-208ENST00000638372 STEAP3Q658P3 488 aa13.29□□□□□ -0.28
SCARB2-208ENST00000638372 TMEM106AQ96A25 262 aa13.29□□□□□ -0.28
SCARB2-208ENST00000638372 THSD7AQ9UPZ6 1657 aa13.29□□□□□ -0.28
SCARB2-208ENST00000638372 GJE1A6NN92 205 aa13.28□□□□□ -0.28
SCARB2-208ENST00000638372 NID1P14543 1247 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms