RNA–Protein interactions for RNA: ENST00000637551.2

CLN3-259, Transcript of CLN3, battenin, humanhuman

TSL 5 BASIC

Gene CLN3, Length 1,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-259ENST00000637551 EEF1E1O43324 174 aaKnown RBP16.31■□□□□ 0.2
CLN3-259ENST00000637551 TPST1O60507 370 aa16.31■□□□□ 0.2
CLN3-259ENST00000637551 VAMP5O95183 116 aa16.31■□□□□ 0.2
CLN3-259ENST00000637551 FESP07332 822 aa16.31■□□□□ 0.2
CLN3-259ENST00000637551 YES1P07947 543 aa16.31■□□□□ 0.2
CLN3-259ENST00000637551 TFPIP10646 304 aa16.31■□□□□ 0.2
CLN3-259ENST00000637551 AGTR1P30556 359 aa16.31■□□□□ 0.2
CLN3-259ENST00000637551 IDUAP35475 653 aa16.31■□□□□ 0.2
CLN3-259ENST00000637551 SLC7A2P52569 658 aa16.31■□□□□ 0.2
CLN3-259ENST00000637551 CRYBA2P53672 197 aa16.31■□□□□ 0.2
CLN3-259ENST00000637551 FXNQ16595 210 aa16.31■□□□□ 0.2
CLN3-259ENST00000637551 STK32CQ86UX6 486 aa16.31■□□□□ 0.2
CLN3-259ENST00000637551 PGAM4Q8N0Y7 254 aa16.31■□□□□ 0.2
CLN3-259ENST00000637551 CADM2Q8N3J6 435 aa16.31■□□□□ 0.2
CLN3-259ENST00000637551 LZICQ8WZA0 190 aa16.31■□□□□ 0.2
CLN3-259ENST00000637551 PROX1Q92786 737 aa16.31■□□□□ 0.2
CLN3-259ENST00000637551 MPP4Q96JB8 637 aa16.31■□□□□ 0.2
CLN3-259ENST00000637551 ARL5BQ96KC2 179 aa16.31■□□□□ 0.2
CLN3-259ENST00000637551 USB1Q9BQ65 265 aaKnown RBP16.31■□□□□ 0.2
CLN3-259ENST00000637551 SF3B5Q9BWJ5 86 aaKnown RBP16.31■□□□□ 0.2
CLN3-259ENST00000637551 PROCRQ9UNN8 238 aa16.31■□□□□ 0.2
CLN3-259ENST00000637551 A0A1B0GWA3 101 aa16.3■□□□□ 0.2
CLN3-259ENST00000637551 A0A1W2PNR3 127 aa16.3■□□□□ 0.2
CLN3-259ENST00000637551 ELOA3DA6NLF2 546 aaPredicted RBP16.3■□□□□ 0.2
CLN3-259ENST00000637551 NME4O00746 187 aa16.3■□□□□ 0.2
CLN3-259ENST00000637551 SSTR2P30874 369 aa16.3■□□□□ 0.2
CLN3-259ENST00000637551 KDELR2P33947 212 aa16.3■□□□□ 0.2
CLN3-259ENST00000637551 PSME3P61289 254 aa16.3■□□□□ 0.2
CLN3-259ENST00000637551 LIPEQ05469 1076 aa16.3■□□□□ 0.2
CLN3-259ENST00000637551 ELOA3BQ3SY89 546 aa16.3■□□□□ 0.2
CLN3-259ENST00000637551 ALG10BQ5I7T1 473 aa16.3■□□□□ 0.2
CLN3-259ENST00000637551 TMEM201Q5SNT2 666 aa16.3■□□□□ 0.2
CLN3-259ENST00000637551 SSX8Q7RTT4 187 aa16.3■□□□□ 0.2
CLN3-259ENST00000637551 GDF7Q7Z4P5 450 aa16.3■□□□□ 0.2
CLN3-259ENST00000637551 ARHGAP24Q8N264 748 aa16.3■□□□□ 0.2
CLN3-259ENST00000637551 CNEP1R1Q8N9A8 125 aa16.3■□□□□ 0.2
CLN3-259ENST00000637551 ELOA3Q8NG57 546 aa16.3■□□□□ 0.2
CLN3-259ENST00000637551 GPR32P1Q8NGA4 272 aa16.3■□□□□ 0.2
CLN3-259ENST00000637551 MFSD8Q8NHS3 518 aa16.3■□□□□ 0.2
CLN3-259ENST00000637551 EPYCQ99645 322 aa16.3■□□□□ 0.2
CLN3-259ENST00000637551 PSD2Q9BQI7 771 aa16.3■□□□□ 0.2
CLN3-259ENST00000637551 NAA11Q9BSU3 229 aaPredicted RBP16.3■□□□□ 0.2
CLN3-259ENST00000637551 TMEM43Q9BTV4 400 aa16.3■□□□□ 0.2
CLN3-259ENST00000637551 RBM24Q9BX46 236 aaKnown RBP16.3■□□□□ 0.2
CLN3-259ENST00000637551 SLC19A3Q9BZV2 496 aa16.3■□□□□ 0.2
CLN3-259ENST00000637551 A0A087WUJ7 227 aa16.29■□□□□ 0.2
CLN3-259ENST00000637551 HTR3EA5X5Y0 456 aa16.29■□□□□ 0.2
CLN3-259ENST00000637551 LIPT2A6NK58 231 aa16.29■□□□□ 0.2
CLN3-259ENST00000637551 C19orf84I3L1E1 186 aa16.29■□□□□ 0.2
CLN3-259ENST00000637551 CHP2O43745 196 aa16.29■□□□□ 0.2
CLN3-259ENST00000637551 AHSA1O95433 338 aa16.29■□□□□ 0.2
CLN3-259ENST00000637551 IGF2P01344 180 aa16.29■□□□□ 0.2
CLN3-259ENST00000637551 THRBP10828 461 aa16.29■□□□□ 0.2
CLN3-259ENST00000637551 HSD17B1P14061 328 aa16.29■□□□□ 0.2
CLN3-259ENST00000637551 HTR2AP28223 471 aa16.29■□□□□ 0.2
CLN3-259ENST00000637551 CPA2P48052 419 aa16.29■□□□□ 0.2
CLN3-259ENST00000637551 KRTAP21-3Q3LHN1 58 aa16.29■□□□□ 0.2
CLN3-259ENST00000637551 GLIPR1L2Q4G1C9 344 aa16.29■□□□□ 0.2
CLN3-259ENST00000637551 C1QTNF12Q5T7M4 302 aa16.29■□□□□ 0.2
CLN3-259ENST00000637551 FAM69AQ5T7M9 428 aa16.29■□□□□ 0.2
CLN3-259ENST00000637551 C1orf140Q5VVS0 124 aa16.29■□□□□ 0.2
CLN3-259ENST00000637551 C16orf89Q6UX73 402 aa16.29■□□□□ 0.2
CLN3-259ENST00000637551 MEX3BQ6ZN04 569 aaKnown RBP16.29■□□□□ 0.2
CLN3-259ENST00000637551 BEND4Q6ZU67 534 aa16.29■□□□□ 0.2
CLN3-259ENST00000637551 BTLAQ7Z6A9 289 aa16.29■□□□□ 0.2
CLN3-259ENST00000637551 COMTD1Q86VU5 262 aa16.29■□□□□ 0.2
CLN3-259ENST00000637551 SMYD1Q8NB12 490 aa16.29■□□□□ 0.2
CLN3-259ENST00000637551 ADPRHL1Q8NDY3 354 aa16.29■□□□□ 0.2
CLN3-259ENST00000637551 ATP6V1C2Q8NEY4 427 aa16.29■□□□□ 0.2
CLN3-259ENST00000637551 FAM222BQ8WU58 562 aa16.29■□□□□ 0.2
CLN3-259ENST00000637551 ABHD3Q8WU67 409 aa16.29■□□□□ 0.2
CLN3-259ENST00000637551 MARVELD3Q96A59 401 aa16.29■□□□□ 0.2
CLN3-259ENST00000637551 TAPBPLQ9BX59 468 aa16.29■□□□□ 0.2
CLN3-259ENST00000637551 OR11A1Q9GZK7 315 aa16.29■□□□□ 0.2
CLN3-259ENST00000637551 ADPRHL2Q9NX46 363 aa16.29■□□□□ 0.2
CLN3-259ENST00000637551 PDZD2O15018 2839 aa16.29■□□□□ 0.2
CLN3-259ENST00000637551 NF1P21359 2839 aa16.28■□□□□ 0.2
CLN3-259ENST00000637551 CSMD2Q7Z408 3487 aa16.28■□□□□ 0.2
CLN3-259ENST00000637551 CCT8L1PA6NM43 557 aa16.28■□□□□ 0.2
CLN3-259ENST00000637551 FRS3O43559 492 aa16.28■□□□□ 0.2
CLN3-259ENST00000637551 OPN1LWP04000 364 aa16.28■□□□□ 0.2
CLN3-259ENST00000637551 PPP3CBP16298 524 aa16.28■□□□□ 0.2
CLN3-259ENST00000637551 CD79BP40259 229 aa16.28■□□□□ 0.2
CLN3-259ENST00000637551 GSK3BP49841 420 aa16.28■□□□□ 0.2
CLN3-259ENST00000637551 SELENOWP63302 87 aa16.28■□□□□ 0.2
CLN3-259ENST00000637551 RASGEF1BQ0VAM2 473 aa16.28■□□□□ 0.2
CLN3-259ENST00000637551 OR1Q1Q15612 314 aa16.28■□□□□ 0.2
CLN3-259ENST00000637551 VWA1Q6PCB0 445 aa16.28■□□□□ 0.2
CLN3-259ENST00000637551 POP5Q969H6 163 aaKnown RBP16.28■□□□□ 0.2
CLN3-259ENST00000637551 KCTD14Q9BQ13 255 aaPredicted RBP16.28■□□□□ 0.2
CLN3-259ENST00000637551 ZNF426Q9BUY5 554 aa16.28■□□□□ 0.2
CLN3-259ENST00000637551 GALNT8Q9NY28 637 aa16.28■□□□□ 0.2
CLN3-259ENST00000637551 CORINQ9Y5Q5 1042 aa16.28■□□□□ 0.2
CLN3-259ENST00000637551 HIVEP1P15822 2718 aa16.27■□□□□ 0.2
CLN3-259ENST00000637551 LOC102725191A0A1B0GVB3 256 aa16.27■□□□□ 0.2
CLN3-259ENST00000637551 TRAPPC13A5PLN9 417 aa16.27■□□□□ 0.2
CLN3-259ENST00000637551 AQP7P3A6NL99 342 aa16.27■□□□□ 0.2
CLN3-259ENST00000637551 ZNF716A6NP11 495 aa16.27■□□□□ 0.2
CLN3-259ENST00000637551 IMPDH2P12268 514 aa16.27■□□□□ 0.2
CLN3-259ENST00000637551 PRF1P14222 555 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms