RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 SLC7A7Q9UM01 511 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 WWP2O00308 870 aa10.59□□□□□ -0.71
CLN6-217ENST00000636964 MAP3K8P41279 467 aa10.59□□□□□ -0.71
CLN6-217ENST00000636964 CAPZA1P52907 286 aa10.59□□□□□ -0.71
CLN6-217ENST00000636964 ST3GAL3Q11203 375 aa10.59□□□□□ -0.71
CLN6-217ENST00000636964 ILKQ13418 452 aa10.59□□□□□ -0.71
CLN6-217ENST00000636964 HLA-BQ31612 363 aa10.59□□□□□ -0.71
CLN6-217ENST00000636964 FLYWCH1Q4VC44 716 aa10.59□□□□□ -0.71
CLN6-217ENST00000636964 VWA2Q5GFL6 755 aa10.59□□□□□ -0.71
CLN6-217ENST00000636964 EXOSC6Q5RKV6 272 aaKnown RBP10.59□□□□□ -0.71
CLN6-217ENST00000636964 PDZK1Q5T2W1 519 aa10.59□□□□□ -0.71
CLN6-217ENST00000636964 ZBTB37Q5TC79 503 aa10.59□□□□□ -0.71
CLN6-217ENST00000636964 LIN54Q6MZP7 749 aa10.59□□□□□ -0.71
CLN6-217ENST00000636964 TMPRSS11AQ6ZMR5 421 aa10.59□□□□□ -0.71
CLN6-217ENST00000636964 GDF7Q7Z4P5 450 aa10.59□□□□□ -0.71
CLN6-217ENST00000636964 ZNF321PQ8N8H1 164 aa10.59□□□□□ -0.71
CLN6-217ENST00000636964 TSLPQ969D9 159 aa10.59□□□□□ -0.71
CLN6-217ENST00000636964 CD180Q99467 661 aa10.59□□□□□ -0.71
CLN6-217ENST00000636964 IFT46Q9NQC8 304 aa10.59□□□□□ -0.71
CLN6-217ENST00000636964 TVP23BQ9NYZ1 205 aa10.59□□□□□ -0.71
CLN6-217ENST00000636964 CSNK1G3Q9Y6M4 447 aa10.59□□□□□ -0.71
CLN6-217ENST00000636964 H3BMH7 237 aa10.59□□□□□ -0.71
CLN6-217ENST00000636964 FABP1P07148 127 aa10.59□□□□□ -0.71
CLN6-217ENST00000636964 SOX3P41225 446 aa10.59□□□□□ -0.71
CLN6-217ENST00000636964 ZNF136P52737 540 aa10.59□□□□□ -0.71
CLN6-217ENST00000636964 TRAM2Q15035 370 aa10.59□□□□□ -0.71
CLN6-217ENST00000636964 TIGD3Q6B0B8 471 aa10.59□□□□□ -0.71
CLN6-217ENST00000636964 GPR135Q8IZ08 494 aa10.59□□□□□ -0.71
CLN6-217ENST00000636964 B3GNT7Q8NFL0 401 aa10.59□□□□□ -0.71
CLN6-217ENST00000636964 UPRTQ96BW1 309 aa10.59□□□□□ -0.71
CLN6-217ENST00000636964 SLC41A3Q96GZ6 507 aa10.59□□□□□ -0.71
CLN6-217ENST00000636964 WDFY2Q96P53 400 aa10.59□□□□□ -0.71
CLN6-217ENST00000636964 MGLLQ99685 303 aa10.59□□□□□ -0.71
CLN6-217ENST00000636964 PLA2G12AQ9BZM1 189 aa10.59□□□□□ -0.71
CLN6-217ENST00000636964 RANBP3Q9H6Z4 567 aaPredicted RBP10.59□□□□□ -0.71
CLN6-217ENST00000636964 IL20RAQ9UHF4 553 aa10.59□□□□□ -0.71
CLN6-217ENST00000636964 FITM1A5D6W6 292 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 NKX2-2O95096 273 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 EPHA8P29322 1005 aaPredicted RBP10.58□□□□□ -0.72
CLN6-217ENST00000636964 GPR4P46093 362 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 ZNHIT3Q15649 155 aaPredicted RBP10.58□□□□□ -0.72
CLN6-217ENST00000636964 LPAL2Q16609 132 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 CLEC12AQ5QGZ9 265 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 ZCCHC12Q6PEW1 402 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 NPSR1Q6W5P4 371 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 SHISA6Q6ZSJ9 500 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 TCEANCQ8N8B7 351 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 C16orf52Q8NHV5 167 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 MYDGFQ969H8 173 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 DPYSL5Q9BPU6 564 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 HEXA-AS1Q9H8Q6 139 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 ABCB9Q9NP78 766 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 FGF21Q9NSA1 209 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 SNTG1Q9NSN8 517 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 MCUBQ9NWR8 336 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 DNAJC27Q9NZQ0 273 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 PILRBQ9UKJ0 227 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 ELF5Q9UKW6 265 aaPredicted RBP10.58□□□□□ -0.72
CLN6-217ENST00000636964 ADAMTS9Q9P2N4 1935 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 TECTAO75443 2155 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 TTLL8A6PVC2 850 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 C17orf105B2RV13 164 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 SIGLEC6O43699 453 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 DBIP07108 87 aaKnown RBP10.58□□□□□ -0.72
CLN6-217ENST00000636964 NID1P14543 1247 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 HTR2AP28223 471 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 GPR3P46089 330 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 CASP6P55212 293 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 GINS1Q14691 196 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 MED22Q15528 200 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 PLK5Q496M5 336 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 ACSM5Q6NUN0 579 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 C1orf94Q6P1W5 598 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 ZNF574Q6ZN55 896 aaPredicted RBP10.58□□□□□ -0.72
CLN6-217ENST00000636964 BMP8AQ7Z5Y6 402 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 KIF18BQ86Y91 864 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 NRMQ8IXM6 262 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 CNOT9Q92600 299 aaKnown RBP10.58□□□□□ -0.72
CLN6-217ENST00000636964 VSTM2LQ96N03 204 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 LMF1Q96S06 567 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 GTPBP2Q9BX10 602 aaKnown RBP10.58□□□□□ -0.72
CLN6-217ENST00000636964 OR10A5Q9H207 317 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 GALNT9Q9HCQ5 603 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 H0YIG0 161 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 SLC22A5O76082 557 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 PLAURQ03405 335 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 CASP12Q6UXS9 341 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 LAPTM4BQ86VI4 370 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 MAML2Q8IZL2 1156 aaPredicted RBP10.58□□□□□ -0.72
CLN6-217ENST00000636964 D2HGDHQ8N465 521 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 DCLRE1CQ96SD1 692 aaKnown RBP10.58□□□□□ -0.72
CLN6-217ENST00000636964 NDC1Q9BTX1 674 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 TRAF4Q9BUZ4 470 aaPredicted RBP10.58□□□□□ -0.72
CLN6-217ENST00000636964 SAP130Q9H0E3 1048 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 NCOR1P1Q9H4R4 102 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 GAREM1Q9H706 876 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 LANCL2Q9NS86 450 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 OR10H1Q9Y4A9 318 aa10.58□□□□□ -0.72
CLN6-217ENST00000636964 CDHR4A6H8M9 788 aa10.57□□□□□ -0.72
CLN6-217ENST00000636964 ARGFXA6NJG6 315 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms