RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 COQ8BQ96D53 544 aa17.48■□□□□ 0.39
TARDBP-228ENST00000629725 EXD2Q9NVH0 621 aa17.48■□□□□ 0.39
TARDBP-228ENST00000629725 TMEM45AQ9NWC5 275 aa17.48■□□□□ 0.39
TARDBP-228ENST00000629725 PCDHGB4Q9UN71 923 aa17.48■□□□□ 0.39
TARDBP-228ENST00000629725 KRT33AO76009 404 aa17.47■□□□□ 0.39
TARDBP-228ENST00000629725 IMPDH2P12268 514 aa17.47■□□□□ 0.39
TARDBP-228ENST00000629725 HTR3AP46098 478 aa17.47■□□□□ 0.39
TARDBP-228ENST00000629725 IDH2P48735 452 aaKnown RBP17.47■□□□□ 0.39
TARDBP-228ENST00000629725 UBE2NP61088 152 aaKnown RBP17.47■□□□□ 0.39
TARDBP-228ENST00000629725 NAAAQ02083 359 aa17.47■□□□□ 0.39
TARDBP-228ENST00000629725 CCNIQ14094 377 aa17.47■□□□□ 0.39
TARDBP-228ENST00000629725 TRIP10Q15642 601 aa17.47■□□□□ 0.39
TARDBP-228ENST00000629725 TBRG1Q3YBR2 411 aa17.47■□□□□ 0.39
TARDBP-228ENST00000629725 ANKRD16Q6P6B7 361 aa17.47■□□□□ 0.39
TARDBP-228ENST00000629725 PAQR6Q6TCH4 344 aa17.47■□□□□ 0.39
TARDBP-228ENST00000629725 TRMT10CQ7L0Y3 403 aaKnown RBP17.47■□□□□ 0.39
TARDBP-228ENST00000629725 AAED1Q7RTV5 226 aa17.47■□□□□ 0.39
TARDBP-228ENST00000629725 HOMEZQ8IX15 550 aa17.47■□□□□ 0.39
TARDBP-228ENST00000629725 ZCCHC24Q8N2G6 241 aaKnown RBP17.47■□□□□ 0.39
TARDBP-228ENST00000629725 WDR60Q8WVS4 1066 aa17.47■□□□□ 0.39
TARDBP-228ENST00000629725 OIT3Q8WWZ8 545 aa17.47■□□□□ 0.39
TARDBP-228ENST00000629725 PMM1Q92871 262 aa17.47■□□□□ 0.39
TARDBP-228ENST00000629725 PPP3R2Q96LZ3 170 aa17.47■□□□□ 0.39
TARDBP-228ENST00000629725 SAP130Q9H0E3 1048 aa17.47■□□□□ 0.39
TARDBP-228ENST00000629725 GIMAP2Q9UG22 337 aa17.47■□□□□ 0.39
TARDBP-228ENST00000629725 TMED7-TICAM2A0A0A6YYA0 188 aa17.46■□□□□ 0.39
TARDBP-228ENST00000629725 hCG_2039718K7EN88 272 aa17.46■□□□□ 0.39
TARDBP-228ENST00000629725 PIP5K1BO14986 540 aa17.46■□□□□ 0.39
TARDBP-228ENST00000629725 PEX11AO75192 247 aa17.46■□□□□ 0.39
TARDBP-228ENST00000629725 IFNGR1P15260 489 aa17.46■□□□□ 0.39
TARDBP-228ENST00000629725 SCGB2A2Q13296 93 aa17.46■□□□□ 0.39
TARDBP-228ENST00000629725 RIN1Q13671 783 aa17.46■□□□□ 0.39
TARDBP-228ENST00000629725 CLEC4FQ8N1N0 589 aa17.46■□□□□ 0.39
TARDBP-228ENST00000629725 ARFGAP2Q8N6H7 521 aa17.46■□□□□ 0.39
TARDBP-228ENST00000629725 KRTCAP2Q8N6L1 136 aa17.46■□□□□ 0.39
TARDBP-228ENST00000629725 OR4F15Q8NGB8 312 aa17.46■□□□□ 0.39
TARDBP-228ENST00000629725 OR1K1Q8NGR3 316 aa17.46■□□□□ 0.39
TARDBP-228ENST00000629725 GCDHQ92947 438 aaPredicted RBP17.46■□□□□ 0.39
TARDBP-228ENST00000629725 AURKBQ96GD4 344 aaPredicted RBP17.46■□□□□ 0.39
TARDBP-228ENST00000629725 SLC35G5Q96KT7 338 aa17.46■□□□□ 0.39
TARDBP-228ENST00000629725 ZNF385AQ96PM9 386 aaKnown RBP17.46■□□□□ 0.39
TARDBP-228ENST00000629725 C1orf50Q9BV19 199 aa17.46■□□□□ 0.39
TARDBP-228ENST00000629725 DUSP26Q9BV47 211 aa17.46■□□□□ 0.39
TARDBP-228ENST00000629725 EXOSC3Q9NQT5 275 aaKnown RBP17.46■□□□□ 0.39
TARDBP-228ENST00000629725 TMED7Q9Y3B3 224 aa17.46■□□□□ 0.39
TARDBP-228ENST00000629725 WDR45Q9Y484 360 aa17.46■□□□□ 0.39
TARDBP-228ENST00000629725 TGP01266 2768 aa17.46■□□□□ 0.39
TARDBP-228ENST00000629725 VSTM5A8MXK1 200 aa17.45■□□□□ 0.38
TARDBP-228ENST00000629725 TMEM233B4DJY2 109 aa17.45■□□□□ 0.38
TARDBP-228ENST00000629725 B4DSR2 109 aa17.45■□□□□ 0.38
TARDBP-228ENST00000629725 ZNF208O43345 1280 aa17.45■□□□□ 0.38
TARDBP-228ENST00000629725 SKAP2O75563 359 aaPredicted RBP17.45■□□□□ 0.38
TARDBP-228ENST00000629725 CECR9P0C854 216 aa17.45■□□□□ 0.38
TARDBP-228ENST00000629725 PRPS1L1P21108 318 aa17.45■□□□□ 0.38
TARDBP-228ENST00000629725 CALCRP30988 508 aa17.45■□□□□ 0.38
TARDBP-228ENST00000629725 CRHR1P34998 444 aa17.45■□□□□ 0.38
TARDBP-228ENST00000629725 LGALS3BPQ08380 585 aa17.45■□□□□ 0.38
TARDBP-228ENST00000629725 C3orf36Q3SXR2 165 aa17.45■□□□□ 0.38
TARDBP-228ENST00000629725 UGT3A2Q3SY77 523 aa17.45■□□□□ 0.38
TARDBP-228ENST00000629725 FAM153CQ494X1 144 aa17.45■□□□□ 0.38
TARDBP-228ENST00000629725 OTUD3Q5T2D3 398 aaPredicted RBP17.45■□□□□ 0.38
TARDBP-228ENST00000629725 TYW3Q6IPR3 259 aaKnown RBP17.45■□□□□ 0.38
TARDBP-228ENST00000629725 GLCCI1Q86VQ1 547 aa17.45■□□□□ 0.38
TARDBP-228ENST00000629725 C10orf107Q8IVU9 208 aa17.45■□□□□ 0.38
TARDBP-228ENST00000629725 ZIC4Q8N9L1 334 aa17.45■□□□□ 0.38
TARDBP-228ENST00000629725 NUP37Q8NFH4 326 aa17.45■□□□□ 0.38
TARDBP-228ENST00000629725 OR9K2Q8NGE7 335 aa17.45■□□□□ 0.38
TARDBP-228ENST00000629725 UBASH3BQ8TF42 649 aa17.45■□□□□ 0.38
TARDBP-228ENST00000629725 DOK1Q99704 481 aa17.45■□□□□ 0.38
TARDBP-228ENST00000629725 OR51I1Q9H343 314 aa17.45■□□□□ 0.38
TARDBP-228ENST00000629725 CRNNQ9UBG3 495 aaPredicted RBP17.45■□□□□ 0.38
TARDBP-228ENST00000629725 TRRAPQ9Y4A5 3859 aa17.44■□□□□ 0.38
TARDBP-228ENST00000629725 RNF103-CHMP3A0A140T963 221 aa17.44■□□□□ 0.38
TARDBP-228ENST00000629725 TMEM72A0PK05 275 aa17.44■□□□□ 0.38
TARDBP-228ENST00000629725 SH3PXD2BA1X283 911 aa17.44■□□□□ 0.38
TARDBP-228ENST00000629725 TMEM89A2RUT3 159 aa17.44■□□□□ 0.38
TARDBP-228ENST00000629725 LGI1O95970 557 aa17.44■□□□□ 0.38
TARDBP-228ENST00000629725 GUSBP08236 651 aa17.44■□□□□ 0.38
TARDBP-228ENST00000629725 FGF4P08620 206 aa17.44■□□□□ 0.38
TARDBP-228ENST00000629725 NPR2P20594 1047 aa17.44■□□□□ 0.38
TARDBP-228ENST00000629725 POLR2HP52434 150 aaKnown RBP17.44■□□□□ 0.38
TARDBP-228ENST00000629725 KCNJ10P78508 379 aa17.44■□□□□ 0.38
TARDBP-228ENST00000629725 ATP6AP1LQ52LC2 224 aa17.44■□□□□ 0.38
TARDBP-228ENST00000629725 ATAD3BQ5T9A4 648 aa17.44■□□□□ 0.38
TARDBP-228ENST00000629725 AP1ARQ63HQ0 302 aa17.44■□□□□ 0.38
TARDBP-228ENST00000629725 GPAT4Q86UL3 456 aa17.44■□□□□ 0.38
TARDBP-228ENST00000629725 LSRQ86X29 649 aaPredicted RBP17.44■□□□□ 0.38
TARDBP-228ENST00000629725 SVOPLQ8N434 492 aa17.44■□□□□ 0.38
TARDBP-228ENST00000629725 ZNF418Q8TF45 676 aaPredicted RBP17.44■□□□□ 0.38
TARDBP-228ENST00000629725 ZG16BQ96DA0 208 aa17.44■□□□□ 0.38
TARDBP-228ENST00000629725 ANKRD27Q96NW4 1050 aa17.44■□□□□ 0.38
TARDBP-228ENST00000629725 SF3B5Q9BWJ5 86 aaKnown RBP17.44■□□□□ 0.38
TARDBP-228ENST00000629725 GATA5Q9BWX5 397 aaPredicted RBP17.44■□□□□ 0.38
TARDBP-228ENST00000629725 ZNF442Q9H7R0 627 aa17.44■□□□□ 0.38
TARDBP-228ENST00000629725 MOV10Q9HCE1 1003 aaKnown RBP17.44■□□□□ 0.38
TARDBP-228ENST00000629725 POLE3Q9NRF9 147 aa17.44■□□□□ 0.38
TARDBP-228ENST00000629725 OSGIN1Q9UJX0 560 aa17.44■□□□□ 0.38
TARDBP-228ENST00000629725 ARPC4-TTLL3A0A0A6YYG9 625 aa17.43■□□□□ 0.38
TARDBP-228ENST00000629725 CLDN24A6NM45 220 aa17.43■□□□□ 0.38
TARDBP-228ENST00000629725 ZNF587BE7ETH6 402 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms