RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 BCL9LQ86UU0 1499 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.35□□□□□ -1.07
GABRB3-216ENST00000628124 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.35□□□□□ -1.07
GABRB3-216ENST00000628124 GPR171O14626 319 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 NSA2O95478 260 aaKnown RBP8.35□□□□□ -1.07
GABRB3-216ENST00000628124 S100A8P05109 93 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 CXCR4P61073 352 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 SLC35A1P78382 337 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 LSAMPQ13449 338 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 SLC9A3R2Q15599 337 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 ZMAT1Q5H9K5 638 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 LYSMD4Q5XG99 296 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 OVCH1Q7RTY7 1134 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 PPP1R3BQ86XI6 285 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 SLC15A4Q8N697 577 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 SIMC1Q8NDZ2 872 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 FBXW5Q969U6 566 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 ABHD6Q9BV23 337 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 BARHL1Q9BZE3 327 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 CACFD1Q9UGQ2 172 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 CSNK1G3Q9Y6M4 447 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 PLIN4Q96Q06 1357 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 TNFRSF10AO00220 468 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 RAD1O60671 282 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 GIFP27352 417 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 WDR5P61964 334 aaKnown RBP8.35□□□□□ -1.07
GABRB3-216ENST00000628124 POU4F3Q15319 338 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 MSS51Q4VC12 460 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 ZNF648Q5T619 568 aaPredicted RBP8.35□□□□□ -1.07
GABRB3-216ENST00000628124 FAM57BQ71RH2 274 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 AAED1Q7RTV5 226 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 CBARPQ8N350 705 aaPredicted RBP8.35□□□□□ -1.07
GABRB3-216ENST00000628124 OR1M1Q8NGA1 313 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 OR14A16Q8NHC5 309 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 SLC41A2Q96JW4 573 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 VPS25Q9BRG1 176 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 UTP23Q9BRU9 249 aaKnown RBP8.35□□□□□ -1.07
GABRB3-216ENST00000628124 ERVMER34-1Q9H9K5 563 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 EBF1Q9UH73 591 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 TMEM221A6NGB7 291 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 SLC31A2O15432 143 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 TUSC2O75896 110 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 ZNF133P52736 654 aaPredicted RBP8.35□□□□□ -1.07
GABRB3-216ENST00000628124 MLLT11Q13015 90 aaPredicted RBP8.35□□□□□ -1.07
GABRB3-216ENST00000628124 OR8B8Q15620 311 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 Q1RN00 199 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 ZNF542PQ5EBM4 170 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 SERPINA11Q86U17 422 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 ADGRG3Q86Y34 549 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 RNF113BQ8IZP6 322 aaKnown RBP8.35□□□□□ -1.07
GABRB3-216ENST00000628124 C1orf87Q8N0U7 546 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 TMEM163Q8TC26 289 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 LIPHQ8WWY8 451 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 ZNF566Q969W8 418 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 REEP6Q96HR9 211 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 C4orf36Q96KX1 117 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 FER1L6-AS2Q96M78 137 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 ZNF582Q96NG8 517 aaPredicted RBP8.35□□□□□ -1.07
GABRB3-216ENST00000628124 SEMA4CQ9C0C4 833 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 LHPPQ9H008 270 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 MED17Q9NVC6 651 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 NXT1Q9UKK6 140 aaKnown RBP8.35□□□□□ -1.07
GABRB3-216ENST00000628124 TRBV11-1A0A0K0K1C0 115 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 ZNF814B7Z6K7 855 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 M0R3H8 397 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 PIRO00625 290 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 TYROBPO43914 113 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 NXPH2O95156 264 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 F2P00734 622 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 ZNF888P0CJ79 500 aaPredicted RBP8.35□□□□□ -1.07
GABRB3-216ENST00000628124 FCGR2AP12318 317 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 BMI1P35226 326 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 EPHA5P54756 1037 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 WNT7BP56706 349 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 POU3F1Q03052 451 aaPredicted RBP8.35□□□□□ -1.07
GABRB3-216ENST00000628124 CDK5R2Q13319 367 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 FRMPD2BQ6IN97 320 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 BTNL8Q6UX41 500 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 FAM122BQ7Z309 247 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 TMEM200AQ86VY9 491 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 PRR22Q8IZ63 422 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 ADGRG5Q8IZF4 528 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 TMEM178AQ8NBL3 297 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 OR5B3Q8NH48 314 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 FIBINQ8TAL6 211 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 SECTM1Q8WVN6 248 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 H1FXQ92522 213 aaKnown RBP8.35□□□□□ -1.07
GABRB3-216ENST00000628124 PSD2Q9BQI7 771 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 ANKRD60Q9BZ19 345 aa8.35□□□□□ -1.07
GABRB3-216ENST00000628124 ABCA9Q8IUA7 1624 aa8.34□□□□□ -1.07
GABRB3-216ENST00000628124 MEIOCA2RUB1 952 aa8.34□□□□□ -1.07
GABRB3-216ENST00000628124 RRP8O43159 456 aaKnown RBP8.34□□□□□ -1.07
GABRB3-216ENST00000628124 SUSD5O60279 629 aa8.34□□□□□ -1.07
GABRB3-216ENST00000628124 EIF1BO60739 113 aaKnown RBP8.34□□□□□ -1.07
GABRB3-216ENST00000628124 MITFO75030 526 aaPredicted RBP8.34□□□□□ -1.07
GABRB3-216ENST00000628124 FGF4P08620 206 aa8.34□□□□□ -1.07
GABRB3-216ENST00000628124 FECHP22830 423 aa8.34□□□□□ -1.07
GABRB3-216ENST00000628124 RPS5P46782 204 aaKnown RBP8.34□□□□□ -1.07
GABRB3-216ENST00000628124 TGM4P49221 684 aa8.34□□□□□ -1.07
GABRB3-216ENST00000628124 SORDQ00796 357 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms