RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 DNAJA4Q8WW22 397 aaPredicted RBP19.81■□□□□ 0.76
SF1-220ENST00000626028 HSD17B8Q92506 261 aa19.81■□□□□ 0.76
SF1-220ENST00000626028 C3orf49Q96BT1 292 aa19.81■□□□□ 0.76
SF1-220ENST00000626028 SF3B5Q9BWJ5 86 aaKnown RBP19.81■□□□□ 0.76
SF1-220ENST00000626028 LIME1Q9H400 295 aa19.81■□□□□ 0.76
SF1-220ENST00000626028 KAT8Q9H7Z6 458 aaKnown RBP19.81■□□□□ 0.76
SF1-220ENST00000626028 NGBQ9NPG2 151 aa19.81■□□□□ 0.76
SF1-220ENST00000626028 PARPBPQ9NWS1 579 aa19.81■□□□□ 0.76
SF1-220ENST00000626028 C6orf203Q9P0P8 240 aaPredicted RBP19.81■□□□□ 0.76
SF1-220ENST00000626028 KLHL14Q9P2G3 628 aa19.81■□□□□ 0.76
SF1-220ENST00000626028 SLC9A8Q9Y2E8 581 aa19.81■□□□□ 0.76
SF1-220ENST00000626028 NOSIPQ9Y314 301 aaKnown RBP19.81■□□□□ 0.76
SF1-220ENST00000626028 ROS1P08922 2347 aa19.8■□□□□ 0.76
SF1-220ENST00000626028 ZC3H12DA2A288 527 aaKnown RBP19.8■□□□□ 0.76
SF1-220ENST00000626028 LIPT2A6NK58 231 aa19.8■□□□□ 0.76
SF1-220ENST00000626028 TMEM229AB2RXF0 380 aa19.8■□□□□ 0.76
SF1-220ENST00000626028 SIAH2O43255 324 aa19.8■□□□□ 0.76
SF1-220ENST00000626028 NPIPB7O75200 414 aa19.8■□□□□ 0.76
SF1-220ENST00000626028 ADAP00813 363 aa19.8■□□□□ 0.76
SF1-220ENST00000626028 THBDP07204 575 aa19.8■□□□□ 0.76
SF1-220ENST00000626028 COX5AP20674 150 aa19.8■□□□□ 0.76
SF1-220ENST00000626028 PCBP3P57721 371 aaKnown RBP19.8■□□□□ 0.76
SF1-220ENST00000626028 GUCY1A3Q02108 690 aa19.8■□□□□ 0.76
SF1-220ENST00000626028 KEAP1Q14145 624 aa19.8■□□□□ 0.76
SF1-220ENST00000626028 CYP51A1Q16850 503 aa19.8■□□□□ 0.76
SF1-220ENST00000626028 TRMT5Q32P41 509 aaKnown RBP19.8■□□□□ 0.76
SF1-220ENST00000626028 C1QTNF12Q5T7M4 302 aa19.8■□□□□ 0.76
SF1-220ENST00000626028 ANKRD34AQ69YU3 496 aa19.8■□□□□ 0.76
SF1-220ENST00000626028 C22orf34Q6ZV56 151 aa19.8■□□□□ 0.76
SF1-220ENST00000626028 ATG4DQ86TL0 474 aaPredicted RBP19.8■□□□□ 0.76
SF1-220ENST00000626028 APH1AQ96BI3 265 aa19.8■□□□□ 0.76
SF1-220ENST00000626028 ZC3HAV1LQ96H79 300 aaKnown RBP19.8■□□□□ 0.76
SF1-220ENST00000626028 TAPBPLQ9BX59 468 aa19.8■□□□□ 0.76
SF1-220ENST00000626028 TRIM2Q9C040 744 aa19.8■□□□□ 0.76
SF1-220ENST00000626028 CCM2LQ9NUG4 571 aaPredicted RBP19.8■□□□□ 0.76
SF1-220ENST00000626028 TESQ9UGI8 421 aaKnown RBP19.8■□□□□ 0.76
SF1-220ENST00000626028 KLF4O43474 513 aa19.79■□□□□ 0.76
SF1-220ENST00000626028 MRPL33O75394 65 aaKnown RBP19.79■□□□□ 0.76
SF1-220ENST00000626028 VAMP5O95183 116 aa19.79■□□□□ 0.76
SF1-220ENST00000626028 ATE1O95260 518 aa19.79■□□□□ 0.76
SF1-220ENST00000626028 C8BP07358 591 aa19.79■□□□□ 0.76
SF1-220ENST00000626028 PNMTP11086 282 aa19.79■□□□□ 0.76
SF1-220ENST00000626028 KLK2P20151 261 aa19.79■□□□□ 0.76
SF1-220ENST00000626028 MDH1P40925 334 aaKnown RBP19.79■□□□□ 0.76
SF1-220ENST00000626028 SLC17A1Q14916 467 aa19.79■□□□□ 0.76
SF1-220ENST00000626028 POU4F3Q15319 338 aa19.79■□□□□ 0.76
SF1-220ENST00000626028 FBXW9Q5XUX1 488 aa19.79■□□□□ 0.76
SF1-220ENST00000626028 FAM91A1Q658Y4 838 aa19.79■□□□□ 0.76
SF1-220ENST00000626028 PTOV1Q86YD1 416 aa19.79■□□□□ 0.76
SF1-220ENST00000626028 ARMC8Q8IUR7 673 aa19.79■□□□□ 0.76
SF1-220ENST00000626028 S100PBPQ96BU1 408 aa19.79■□□□□ 0.76
SF1-220ENST00000626028 PIK3IP1Q96FE7 263 aa19.79■□□□□ 0.76
SF1-220ENST00000626028 SAR1AQ9NR31 198 aa19.79■□□□□ 0.76
SF1-220ENST00000626028 RPS6KB2Q9UBS0 482 aa19.79■□□□□ 0.76
SF1-220ENST00000626028 SLC13A4Q9UKG4 626 aa19.79■□□□□ 0.76
SF1-220ENST00000626028 PLEKHA6Q9Y2H5 1048 aa19.79■□□□□ 0.76
SF1-220ENST00000626028 A0A1W2PPR1 153 aa19.78■□□□□ 0.76
SF1-220ENST00000626028 AQP7P3A6NL99 342 aa19.78■□□□□ 0.76
SF1-220ENST00000626028 MFN2O95140 757 aa19.78■□□□□ 0.76
SF1-220ENST00000626028 CEACAM7Q14002 265 aa19.78■□□□□ 0.76
SF1-220ENST00000626028 INTS11Q5TA45 600 aaKnown RBP19.78■□□□□ 0.76
SF1-220ENST00000626028 C1orf140Q5VVS0 124 aa19.78■□□□□ 0.76
SF1-220ENST00000626028 CGB2Q6NT52 195 aa19.78■□□□□ 0.76
SF1-220ENST00000626028 ULK3Q6PHR2 472 aa19.78■□□□□ 0.76
SF1-220ENST00000626028 CCDC103Q8IW40 242 aa19.78■□□□□ 0.76
SF1-220ENST00000626028 OR8J3Q8NGG0 315 aa19.78■□□□□ 0.76
SF1-220ENST00000626028 MFSD8Q8NHS3 518 aa19.78■□□□□ 0.76
SF1-220ENST00000626028 MALT1Q9UDY8 824 aa19.78■□□□□ 0.76
SF1-220ENST00000626028 ARID1AO14497 2285 aa19.78■□□□□ 0.76
SF1-220ENST00000626028 TEP1Q99973 2627 aaKnown RBP19.77■□□□□ 0.76
SF1-220ENST00000626028 ELOA3DA6NLF2 546 aaPredicted RBP19.77■□□□□ 0.76
SF1-220ENST00000626028 FBP2O00757 339 aa19.77■□□□□ 0.76
SF1-220ENST00000626028 FRS3O43559 492 aa19.77■□□□□ 0.76
SF1-220ENST00000626028 OR2T1O43869 369 aa19.77■□□□□ 0.76
SF1-220ENST00000626028 FZD7O75084 574 aa19.77■□□□□ 0.76
SF1-220ENST00000626028 LOXP28300 417 aaPredicted RBP19.77■□□□□ 0.76
SF1-220ENST00000626028 MTPNP58546 118 aa19.77■□□□□ 0.76
SF1-220ENST00000626028 NCALDP61601 193 aa19.77■□□□□ 0.76
SF1-220ENST00000626028 KLF10Q13118 480 aa19.77■□□□□ 0.76
SF1-220ENST00000626028 ELOA3BQ3SY89 546 aa19.77■□□□□ 0.76
SF1-220ENST00000626028 OTUD3Q5T2D3 398 aaPredicted RBP19.77■□□□□ 0.76
SF1-220ENST00000626028 SWT1Q5T5J6 900 aaKnown RBP19.77■□□□□ 0.76
SF1-220ENST00000626028 C20orf204Q6ZNR8 217 aa19.77■□□□□ 0.76
SF1-220ENST00000626028 BHLHA15Q7RTS1 189 aaPredicted RBP19.77■□□□□ 0.76
SF1-220ENST00000626028 PATL1Q86TB9 770 aaKnown RBP19.77■□□□□ 0.76
SF1-220ENST00000626028 ELOA3Q8NG57 546 aa19.77■□□□□ 0.76
SF1-220ENST00000626028 OR52E4Q8NGH9 312 aa19.77■□□□□ 0.76
SF1-220ENST00000626028 RASSF5Q8WWW0 418 aa19.77■□□□□ 0.76
SF1-220ENST00000626028 TMEM45BQ96B21 275 aa19.77■□□□□ 0.76
SF1-220ENST00000626028 ZNF317Q96PQ6 595 aaPredicted RBP19.77■□□□□ 0.76
SF1-220ENST00000626028 PIP5K1AQ99755 562 aa19.77■□□□□ 0.76
SF1-220ENST00000626028 RSPO3Q9BXY4 272 aaPredicted RBP19.77■□□□□ 0.76
SF1-220ENST00000626028 BEX4Q9NWD9 120 aaPredicted RBP19.77■□□□□ 0.76
SF1-220ENST00000626028 ASB6Q9NWX5 421 aa19.77■□□□□ 0.76
SF1-220ENST00000626028 PRSS50Q9UI38 385 aa19.77■□□□□ 0.76
SF1-220ENST00000626028 FLVCR1Q9Y5Y0 555 aa19.77■□□□□ 0.76
SF1-220ENST00000626028 HEATR1Q9H583 2144 aaKnown RBP19.76■□□□□ 0.75
SF1-220ENST00000626028 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP19.76■□□□□ 0.75
SF1-220ENST00000626028 FMO6PO60774 539 aa19.76■□□□□ 0.75
SF1-220ENST00000626028 AHSA1O95433 338 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms