RNA–Protein interactions for RNA: ENST00000625778.2

UBE3A-209, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-209ENST00000625778 SELENOFO60613 162 aa12.8□□□□□ -0.36
UBE3A-209ENST00000625778 PTP4A3O75365 173 aa12.8□□□□□ -0.36
UBE3A-209ENST00000625778 ASGR2P07307 311 aa12.8□□□□□ -0.36
UBE3A-209ENST00000625778 FBXO45P0C2W1 286 aa12.8□□□□□ -0.36
UBE3A-209ENST00000625778 CST5P28325 142 aaPredicted RBP12.8□□□□□ -0.36
UBE3A-209ENST00000625778 TAS2R43P59537 309 aa12.8□□□□□ -0.36
UBE3A-209ENST00000625778 RBMS2Q15434 407 aaKnown RBP12.8□□□□□ -0.36
UBE3A-209ENST00000625778 NDUFAF6Q330K2 333 aa12.8□□□□□ -0.36
UBE3A-209ENST00000625778 C4orf46Q504U0 113 aa12.8□□□□□ -0.36
UBE3A-209ENST00000625778 DVL3Q92997 716 aaPredicted RBP12.8□□□□□ -0.36
UBE3A-209ENST00000625778 MED11Q9P086 117 aa12.8□□□□□ -0.36
UBE3A-209ENST00000625778 ADAM18Q9Y3Q7 739 aa12.8□□□□□ -0.36
UBE3A-209ENST00000625778 A0A1W2PPV9 198 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 TRAPPC13A5PLN9 417 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 H7C2Y5 167 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 BET1O15155 118 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 RCBTB2O95199 551 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 RASGRP1O95267 797 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 MAS1P04201 325 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 LIPCP11150 499 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 F3P13726 295 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 ACHEP22303 614 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 CDK2P24941 298 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 DYRK1AQ13627 763 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 GK2Q14410 553 aaPredicted RBP12.79□□□□□ -0.36
UBE3A-209ENST00000625778 ZNF169Q14929 603 aaPredicted RBP12.79□□□□□ -0.36
UBE3A-209ENST00000625778 UBE2NLQ5JXB2 153 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 HACD4Q5VWC8 232 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 DMKNQ6E0U4 476 aaPredicted RBP12.79□□□□□ -0.36
UBE3A-209ENST00000625778 LRRN1Q6UXK5 716 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 TMED4Q7Z7H5 227 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 MS4A6EQ96DS6 147 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 ADAT1Q9BUB4 502 aaKnown RBP12.79□□□□□ -0.36
UBE3A-209ENST00000625778 SLC6A20Q9NP91 592 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 CMC2Q9NRP2 79 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 CALML5Q9NZT1 146 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 MED31Q9Y3C7 131 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 LRRC72A6NJI9 287 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 KRBOX1C9JBD0 128 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 SDC3O75056 442 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 PAPLNO95428 1278 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 RLN2P04090 185 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 NT5EP21589 574 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 WASP42768 502 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 AP3S2P59780 193 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 SNRPNP63162 240 aaKnown RBP12.79□□□□□ -0.36
UBE3A-209ENST00000625778 SIRPAP78324 504 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 ETFDHQ16134 617 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 PCGF3Q3KNV8 242 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 DCAF12L2Q5VW00 463 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 ZCCHC12Q6PEW1 402 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 FIP1L1Q6UN15 594 aaKnown RBP12.79□□□□□ -0.36
UBE3A-209ENST00000625778 GLDNQ6ZMI3 551 aaPredicted RBP12.79□□□□□ -0.36
UBE3A-209ENST00000625778 PXKQ7Z7A4 578 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 CXorf40AQ8TE69 158 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 LRRC46Q96FV0 321 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 PAWRQ96IZ0 340 aaKnown RBP12.79□□□□□ -0.36
UBE3A-209ENST00000625778 HMX1Q9NP08 348 aaPredicted RBP12.79□□□□□ -0.36
UBE3A-209ENST00000625778 TAS2R3Q9NYW6 316 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 ACSL5Q9ULC5 683 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 CARNS1A5YM72 827 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 KLF4O43474 513 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 SRMP19623 302 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 AK4P27144 223 aaPredicted RBP12.79□□□□□ -0.36
UBE3A-209ENST00000625778 PRKAR1BP31321 381 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 RAP2BP61225 183 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 ZNF658BQ4V348 819 aaPredicted RBP12.79□□□□□ -0.36
UBE3A-209ENST00000625778 CYB5R2Q6BCY4 276 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 ABHD17CQ6PCB6 329 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 S100A16Q96FQ6 103 aaKnown RBP12.79□□□□□ -0.36
UBE3A-209ENST00000625778 WBP1Q96G27 269 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 ZNF578Q96N58 590 aaPredicted RBP12.79□□□□□ -0.36
UBE3A-209ENST00000625778 MNTQ99583 582 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 SYNDIG1Q9H7V2 258 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 SLC35A3Q9Y2D2 325 aa12.79□□□□□ -0.36
UBE3A-209ENST00000625778 ZNF106Q9H2Y7 1883 aaKnown RBP12.78□□□□□ -0.36
UBE3A-209ENST00000625778 A0A1B0GUH1 482 aa12.78□□□□□ -0.36
UBE3A-209ENST00000625778 SPINT1O43278 529 aa12.78□□□□□ -0.36
UBE3A-209ENST00000625778 TGM6O95932 706 aa12.78□□□□□ -0.36
UBE3A-209ENST00000625778 SERPINA3P01011 423 aa12.78□□□□□ -0.36
UBE3A-209ENST00000625778 RPN2P04844 631 aa12.78□□□□□ -0.36
UBE3A-209ENST00000625778 CSN2P05814 226 aa12.78□□□□□ -0.36
UBE3A-209ENST00000625778 H2BFSP57053 126 aa12.78□□□□□ -0.36
UBE3A-209ENST00000625778 PLA2G7Q13093 441 aa12.78□□□□□ -0.36
UBE3A-209ENST00000625778 CDK5R1Q15078 307 aa12.78□□□□□ -0.36
UBE3A-209ENST00000625778 TRMT12Q53H54 448 aaKnown RBP12.78□□□□□ -0.36
UBE3A-209ENST00000625778 FAM69AQ5T7M9 428 aa12.78□□□□□ -0.36
UBE3A-209ENST00000625778 SLC48A1Q6P1K1 146 aa12.78□□□□□ -0.36
UBE3A-209ENST00000625778 TMPRSS12Q86WS5 348 aa12.78□□□□□ -0.36
UBE3A-209ENST00000625778 BVESQ8NE79 360 aa12.78□□□□□ -0.36
UBE3A-209ENST00000625778 SCARB1Q8WTV0 552 aa12.78□□□□□ -0.36
UBE3A-209ENST00000625778 NXPE3Q969Y0 559 aa12.78□□□□□ -0.36
UBE3A-209ENST00000625778 FBXO17Q96EF6 278 aa12.78□□□□□ -0.36
UBE3A-209ENST00000625778 ZNF514Q96K75 400 aaPredicted RBP12.78□□□□□ -0.36
UBE3A-209ENST00000625778 HSPA12BQ96MM6 686 aa12.78□□□□□ -0.36
UBE3A-209ENST00000625778 PRSS27Q9BQR3 290 aa12.78□□□□□ -0.36
UBE3A-209ENST00000625778 MFFQ9GZY8 342 aa12.78□□□□□ -0.36
UBE3A-209ENST00000625778 NRIP3Q9NQ35 241 aa12.78□□□□□ -0.36
UBE3A-209ENST00000625778 ST6GALNAC2Q9UJ37 374 aa12.78□□□□□ -0.36
UBE3A-209ENST00000625778 GTF2A1LQ9UNN4 478 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms