RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 A0A1W2PQL4 384 aaPredicted RBP18■□□□□ 0.47
PCDHB11-202ENST00000624887 TSPAN2O60636 221 aa18■□□□□ 0.47
PCDHB11-202ENST00000624887 CD53P19397 219 aa18■□□□□ 0.47
PCDHB11-202ENST00000624887 NR0B1P51843 470 aaKnown RBP18■□□□□ 0.47
PCDHB11-202ENST00000624887 KRR1Q13601 381 aaKnown RBP18■□□□□ 0.47
PCDHB11-202ENST00000624887 GGTLC2Q14390 218 aa18■□□□□ 0.47
PCDHB11-202ENST00000624887 ZNF74Q16587 644 aa18■□□□□ 0.47
PCDHB11-202ENST00000624887 FAAH2Q6GMR7 532 aa18■□□□□ 0.47
PCDHB11-202ENST00000624887 DESI1Q6ICB0 168 aa18■□□□□ 0.47
PCDHB11-202ENST00000624887 RHBDD2Q6NTF9 364 aa18■□□□□ 0.47
PCDHB11-202ENST00000624887 ZNF574Q6ZN55 896 aaPredicted RBP18■□□□□ 0.47
PCDHB11-202ENST00000624887 OR5W2Q8NH69 310 aa18■□□□□ 0.47
PCDHB11-202ENST00000624887 CTSFQ9UBX1 484 aa18■□□□□ 0.47
PCDHB11-202ENST00000624887 ZMIZ1Q9ULJ6 1067 aa18■□□□□ 0.47
PCDHB11-202ENST00000624887 ATXN7L1Q9ULK2 861 aaPredicted RBP18■□□□□ 0.47
PCDHB11-202ENST00000624887 CD8B2A6NJW9 211 aa18■□□□□ 0.47
PCDHB11-202ENST00000624887 OR6C76A6NM76 312 aa18■□□□□ 0.47
PCDHB11-202ENST00000624887 IDH3BO43837 385 aa18■□□□□ 0.47
PCDHB11-202ENST00000624887 RGS9O75916 674 aaPredicted RBP18■□□□□ 0.47
PCDHB11-202ENST00000624887 CD8BP10966 210 aa18■□□□□ 0.47
PCDHB11-202ENST00000624887 GRK6P43250 576 aa18■□□□□ 0.47
PCDHB11-202ENST00000624887 CAPZA2P47755 286 aa18■□□□□ 0.47
PCDHB11-202ENST00000624887 SLC6A8P48029 635 aa18■□□□□ 0.47
PCDHB11-202ENST00000624887 DEFA1P59665 94 aa18■□□□□ 0.47
PCDHB11-202ENST00000624887 DEFA3P59666 94 aa18■□□□□ 0.47
PCDHB11-202ENST00000624887 INSL4Q14641 139 aa18■□□□□ 0.47
PCDHB11-202ENST00000624887 DDI2Q5TDH0 399 aa18■□□□□ 0.47
PCDHB11-202ENST00000624887 COX15Q7KZN9 410 aa18■□□□□ 0.47
PCDHB11-202ENST00000624887 SLC29A4Q7RTT9 530 aa18■□□□□ 0.47
PCDHB11-202ENST00000624887 NPEPL1Q8NDH3 523 aa18■□□□□ 0.47
PCDHB11-202ENST00000624887 DDOQ99489 341 aa18■□□□□ 0.47
PCDHB11-202ENST00000624887 RTN4RQ9BZR6 473 aa18■□□□□ 0.47
PCDHB11-202ENST00000624887 TGIF2Q9GZN2 237 aa18■□□□□ 0.47
PCDHB11-202ENST00000624887 C12orf10Q9HB07 376 aa18■□□□□ 0.47
PCDHB11-202ENST00000624887 SLC22A11Q9NSA0 550 aa18■□□□□ 0.47
PCDHB11-202ENST00000624887 NOX1Q9Y5S8 564 aa18■□□□□ 0.47
PCDHB11-202ENST00000624887 MPDZO75970 2070 aa17.99■□□□□ 0.47
PCDHB11-202ENST00000624887 SMIM30A4D0T7 59 aa17.99■□□□□ 0.47
PCDHB11-202ENST00000624887 CDC14CA4D256 554 aa17.99■□□□□ 0.47
PCDHB11-202ENST00000624887 PLPP2O43688 288 aa17.99■□□□□ 0.47
PCDHB11-202ENST00000624887 TAS2R43P59537 309 aa17.99■□□□□ 0.47
PCDHB11-202ENST00000624887 ZNF79Q15937 498 aa17.99■□□□□ 0.47
PCDHB11-202ENST00000624887 GXYLT1Q4G148 440 aa17.99■□□□□ 0.47
PCDHB11-202ENST00000624887 VASH1Q7L8A9 365 aaPredicted RBP17.99■□□□□ 0.47
PCDHB11-202ENST00000624887 CADM3Q8N126 398 aa17.99■□□□□ 0.47
PCDHB11-202ENST00000624887 FAM181AQ8N9Y4 354 aa17.99■□□□□ 0.47
PCDHB11-202ENST00000624887 POMGNT2Q8NAT1 580 aa17.99■□□□□ 0.47
PCDHB11-202ENST00000624887 EDAQ92838 391 aa17.99■□□□□ 0.47
PCDHB11-202ENST00000624887 ZNF524Q96C55 264 aa17.99■□□□□ 0.47
PCDHB11-202ENST00000624887 C4orf36Q96KX1 117 aa17.99■□□□□ 0.47
PCDHB11-202ENST00000624887 ADAM19Q9H013 955 aa17.99■□□□□ 0.47
PCDHB11-202ENST00000624887 KCNN2Q9H2S1 579 aa17.99■□□□□ 0.47
PCDHB11-202ENST00000624887 PRMT8Q9NR22 394 aaPredicted RBP17.99■□□□□ 0.47
PCDHB11-202ENST00000624887 HIF3AQ9Y2N7 669 aa17.99■□□□□ 0.47
PCDHB11-202ENST00000624887 A0A1B0GTQ1 180 aa17.99■□□□□ 0.47
PCDHB11-202ENST00000624887 A0A1W2PQD3 144 aa17.99■□□□□ 0.47
PCDHB11-202ENST00000624887 SHISA3A0PJX4 238 aa17.99■□□□□ 0.47
PCDHB11-202ENST00000624887 CAV3P56539 151 aa17.99■□□□□ 0.47
PCDHB11-202ENST00000624887 ZNF117Q03924 483 aa17.99■□□□□ 0.47
PCDHB11-202ENST00000624887 EGR4Q05215 589 aa17.99■□□□□ 0.47
PCDHB11-202ENST00000624887 PLCXD2Q0VAA5 305 aa17.99■□□□□ 0.47
PCDHB11-202ENST00000624887 NR0B2Q15466 257 aa17.99■□□□□ 0.47
PCDHB11-202ENST00000624887 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.99■□□□□ 0.47
PCDHB11-202ENST00000624887 GLYR1Q49A26 553 aaPredicted RBP17.99■□□□□ 0.47
PCDHB11-202ENST00000624887 PMS2CLQ68D20 193 aa17.99■□□□□ 0.47
PCDHB11-202ENST00000624887 GUSBP11Q6P575 273 aa17.99■□□□□ 0.47
PCDHB11-202ENST00000624887 RABEPKQ7Z6M1 372 aa17.99■□□□□ 0.47
PCDHB11-202ENST00000624887 WDR5BQ86VZ2 330 aa17.99■□□□□ 0.47
PCDHB11-202ENST00000624887 ZNF441Q8N8Z8 693 aa17.99■□□□□ 0.47
PCDHB11-202ENST00000624887 ZNF563Q8TA94 476 aa17.99■□□□□ 0.47
PCDHB11-202ENST00000624887 SMAP2Q8WU79 429 aaPredicted RBP17.99■□□□□ 0.47
PCDHB11-202ENST00000624887 HTRA1Q92743 480 aa17.99■□□□□ 0.47
PCDHB11-202ENST00000624887 ZMYND19Q96E35 227 aaPredicted RBP17.99■□□□□ 0.47
PCDHB11-202ENST00000624887 SRRQ9GZT4 340 aa17.99■□□□□ 0.47
PCDHB11-202ENST00000624887 MMP25Q9NPA2 562 aa17.99■□□□□ 0.47
PCDHB11-202ENST00000624887 NANSQ9NR45 359 aa17.99■□□□□ 0.47
PCDHB11-202ENST00000624887 C14orf119Q9NWQ9 140 aa17.99■□□□□ 0.47
PCDHB11-202ENST00000624887 MYO15AQ9UKN7 3530 aa17.98■□□□□ 0.47
PCDHB11-202ENST00000624887 LY6G6EA0A0G2JKS1 128 aa17.98■□□□□ 0.47
PCDHB11-202ENST00000624887 ALG1L2C9J202 215 aa17.98■□□□□ 0.47
PCDHB11-202ENST00000624887 E9PI62 339 aa17.98■□□□□ 0.47
PCDHB11-202ENST00000624887 J3QLW9 94 aa17.98■□□□□ 0.47
PCDHB11-202ENST00000624887 ANKRD34CP0C6C1 535 aa17.98■□□□□ 0.47
PCDHB11-202ENST00000624887 OR2T7P0C7T2 308 aa17.98■□□□□ 0.47
PCDHB11-202ENST00000624887 TDGF1P13385 188 aa17.98■□□□□ 0.47
PCDHB11-202ENST00000624887 ZNF19P17023 458 aa17.98■□□□□ 0.47
PCDHB11-202ENST00000624887 PNLIPRP2P54317 469 aa17.98■□□□□ 0.47
PCDHB11-202ENST00000624887 OR12D2P58182 307 aa17.98■□□□□ 0.47
PCDHB11-202ENST00000624887 ACY1Q03154 408 aa17.98■□□□□ 0.47
PCDHB11-202ENST00000624887 LGALS3BPQ08380 585 aa17.98■□□□□ 0.47
PCDHB11-202ENST00000624887 LCN1P1Q5VSP4 162 aa17.98■□□□□ 0.47
PCDHB11-202ENST00000624887 LANCL3Q6ZV70 420 aa17.98■□□□□ 0.47
PCDHB11-202ENST00000624887 NUP54Q7Z3B4 507 aa17.98■□□□□ 0.47
PCDHB11-202ENST00000624887 C17orf47Q8NEP4 570 aa17.98■□□□□ 0.47
PCDHB11-202ENST00000624887 OR2T27Q8NH04 317 aa17.98■□□□□ 0.47
PCDHB11-202ENST00000624887 MOSPD2Q8NHP6 518 aa17.98■□□□□ 0.47
PCDHB11-202ENST00000624887 SAP25Q8TEE9 199 aa17.98■□□□□ 0.47
PCDHB11-202ENST00000624887 OMA1Q96E52 524 aa17.98■□□□□ 0.47
PCDHB11-202ENST00000624887 NECAB3Q96P71 396 aaPredicted RBP17.98■□□□□ 0.47
PCDHB11-202ENST00000624887 NMNAT3Q96T66 252 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms