RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 ARRB1P49407 418 aaPredicted RBP11.87□□□□□ -0.51
MSH6-215ENST00000622629 RRAS2P62070 204 aaPredicted RBP11.87□□□□□ -0.51
MSH6-215ENST00000622629 E2F1Q01094 437 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 PCGF3Q3KNV8 242 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 PHF19Q5T6S3 580 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 LRRN1Q6UXK5 716 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 PRSS45Q7RTY3 260 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 OR13C5Q8NGS8 318 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 SYNPRQ8TBG9 265 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 LGALS14Q8TCE9 139 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 KLHL15Q96M94 604 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 ALG12Q9BV10 488 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 COQ3Q9NZJ6 369 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 DOCK6Q96HP0 2047 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 B4DXG7 233 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 SURF4O15260 269 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 CFIP05156 583 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 H2BFMP0C1H6 154 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 PNMTP11086 282 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 RIDAP52758 137 aaKnown RBP11.87□□□□□ -0.51
MSH6-215ENST00000622629 MVDP53602 400 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 FCN2Q15485 313 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 ARHGAP11BQ3KRB8 267 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 BAIAP2L2Q6UXY1 529 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 ESPNLQ6ZVH7 1005 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 KCTD9Q7L273 389 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 OR4K17Q8NGC6 315 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 OR4Q3Q8NH05 313 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 TMEM234Q8WY98 164 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 FCRL1Q96LA6 429 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 UBQLN4Q9NRR5 601 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 OBP2AQ9NY56 170 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 C13orf42A0A1B0GVH6 325 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 OR10A3P58181 314 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 HNRNPKP61978 463 aaKnown RBP eCLIP11.87□□□□□ -0.51
MSH6-215ENST00000622629 CHAF1BQ13112 559 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 TMEM225Q6GV28 225 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 SLC35D2Q76EJ3 337 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 NAXEQ8NCW5 288 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 SIMC1Q8NDZ2 872 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 GPR148Q8TDV2 347 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 KCTD12Q96CX2 325 aaKnown RBP11.87□□□□□ -0.51
MSH6-215ENST00000622629 PSD2Q9BQI7 771 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 GTPBP2Q9BX10 602 aaKnown RBP11.87□□□□□ -0.51
MSH6-215ENST00000622629 NOX4Q9NPH5 578 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 SCP2D1Q9UJQ7 156 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 NUBP2Q9Y5Y2 271 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 A0A1W2PPL8 197 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 H3BML4 177 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 FABP7O15540 132 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 OR2T7P0C7T2 308 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 SLC35E2P0CK97 266 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 CCR6P51684 374 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 PRKXP51817 358 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 YPEL5P62699 121 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 ASAH1Q13510 395 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 DUSP6Q16828 381 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 DPY19L4Q7Z388 723 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 OR6N1Q8NGY5 312 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 OR2T27Q8NH04 317 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 NRSN2Q9GZP1 204 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 HOXD1Q9GZZ0 328 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 SLC25A19Q9HC21 320 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 VDAC3Q9Y277 283 aa11.87□□□□□ -0.51
MSH6-215ENST00000622629 NYNRINQ9P2P1 1898 aaKnown RBP11.86□□□□□ -0.51
MSH6-215ENST00000622629 SERINC4A6NH21 518 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 CHP2O43745 196 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 SLC16A7O60669 478 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 HEXBP07686 556 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 HCKP08631 526 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 ST6GAL1P15907 406 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 HTRA4P83105 476 aaPredicted RBP11.86□□□□□ -0.51
MSH6-215ENST00000622629 CARD17Q5XLA6 110 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 NIPAL3Q6P499 406 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 ZNF767PQ75MW2 155 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 C19orf47Q8N9M1 422 aaKnown RBP11.86□□□□□ -0.51
MSH6-215ENST00000622629 OR51Q1Q8NH59 317 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 ELF4Q99607 663 aaPredicted RBP11.86□□□□□ -0.51
MSH6-215ENST00000622629 OR10A5Q9H207 317 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 TMEM185BQ9H7F4 350 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 ABRACLQ9P1F3 81 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 DHCR7Q9UBM7 475 aaKnown RBP11.86□□□□□ -0.51
MSH6-215ENST00000622629 EPHA6Q9UF33 1036 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 ZNF236Q9UL36 1845 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 ANKRD61A6NGH8 418 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 NRG2O14511 850 aaPredicted RBP11.86□□□□□ -0.51
MSH6-215ENST00000622629 OPN1LWP04000 364 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 LIMS3P0CW19 117 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 LIMS4P0CW20 117 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 FXYD6P3P58550 94 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 DUSP8Q13202 625 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 RPL22L1Q6P5R6 122 aaKnown RBP11.86□□□□□ -0.51
MSH6-215ENST00000622629 FOXRED2Q8IWF2 684 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 ELMOD3Q96FG2 381 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 OR2A14Q96R47 310 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 UBQLN2Q9UHD9 624 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 SLC22A7Q9Y694 548 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 A0A1B0GVI7 797 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 TRIM64A6NGJ6 449 aa11.86□□□□□ -0.51
MSH6-215ENST00000622629 ZSCAN5BA6NJL1 495 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms