RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 FAM98AQ8NCA5 519 aaKnown RBP8.64□□□□□ -1.03
PDPN-212ENST00000621990 OR4K13Q8NH42 304 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 CREB3L1Q96BA8 519 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 ZMYND19Q96E35 227 aaPredicted RBP8.64□□□□□ -1.03
PDPN-212ENST00000621990 RANGRFQ9HD47 186 aaPredicted RBP8.64□□□□□ -1.03
PDPN-212ENST00000621990 PRODH2Q9UF12 536 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 TMEM184BQ9Y519 407 aaPredicted RBP8.64□□□□□ -1.03
PDPN-212ENST00000621990 COL5A1P20908 1838 aaPredicted RBP8.64□□□□□ -1.03
PDPN-212ENST00000621990 FAM240BA0A1B0GVZ2 78 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 GATBO75879 557 aaKnown RBP8.63□□□□□ -1.03
PDPN-212ENST00000621990 UCHL1P09936 223 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 RCVRNP35243 200 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 ACVR1BP36896 505 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 PRPS1P60891 318 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 SIRPAP78324 504 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 HSF2Q03933 536 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 LGALS3BPQ08380 585 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 ERV3-1Q14264 604 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 PON3Q15166 354 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 ELOCQ15369 112 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 RPL22L1Q6P5R6 122 aaKnown RBP8.63□□□□□ -1.03
PDPN-212ENST00000621990 SLITRK4Q8IW52 837 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 SLC35F2Q8IXU6 374 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 UBE2J2Q8N2K1 259 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 SAMD12Q8N8I0 201 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 OR51Q1Q8NH59 317 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 HAVCR2Q8TDQ0 301 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 RAB33BQ9H082 229 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 ADAM18Q9Y3Q7 739 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 ALG5Q9Y673 324 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 A0A1B0GTQ1 180 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 A0A1W2PR77 199 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 NOTOA8MTQ0 251 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 A8MV72 311 aaPredicted RBP8.63□□□□□ -1.03
PDPN-212ENST00000621990 PNMTP11086 282 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 APEHP13798 732 aaKnown RBP8.63□□□□□ -1.03
PDPN-212ENST00000621990 RAB3BP20337 219 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 GBX2P52951 348 aaPredicted RBP8.63□□□□□ -1.03
PDPN-212ENST00000621990 SKP2Q13309 424 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 SLC25A35Q3KQZ1 300 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 TP53I3Q53FA7 332 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 PLA1AQ53H76 456 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 TCTE1Q5JU00 501 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 ZNF684Q5T5D7 378 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 PYHIN1Q6K0P9 492 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 UNQ9370/PRO34162Q6UXP9 181 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 NUP54Q7Z3B4 507 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 ATG4DQ86TL0 474 aaPredicted RBP8.63□□□□□ -1.03
PDPN-212ENST00000621990 NOXA1Q86UR1 476 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 GLCCI1Q86VQ1 547 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 TRMT10AQ8TBZ6 339 aaKnown RBP8.63□□□□□ -1.03
PDPN-212ENST00000621990 ZNRF4Q8WWF5 429 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 THAP4Q8WY91 577 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 PHYHIPQ92561 330 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 RFT1Q96AA3 541 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 THAP7Q9BT49 309 aaPredicted RBP8.63□□□□□ -1.03
PDPN-212ENST00000621990 WACQ9BTA9 647 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.63□□□□□ -1.03
PDPN-212ENST00000621990 DDX28Q9NUL7 540 aaKnown RBP8.63□□□□□ -1.03
PDPN-212ENST00000621990 ABRACLQ9P1F3 81 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 NLKQ9UBE8 527 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 GMEB2Q9UKD1 530 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 HIF3AQ9Y2N7 669 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 OR10H1Q9Y4A9 318 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 EML5Q05BV3 1969 aa8.63□□□□□ -1.03
PDPN-212ENST00000621990 IGHV1OR15-9A0A0B4J2B8 117 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 OR6C68A6NDL8 312 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 OR2W5A6NFC9 320 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 FAM47E-STBD1D6RA91 191 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 LRRN3E7EW58 273 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 H3BMH7 237 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 LANCL1O43813 399 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 ORC5O43913 435 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 FZD7O75084 574 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 ARL6IP5O75915 188 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 IL33O95760 270 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 WNT1P04628 370 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 YES1P07947 543 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 EPXP11678 715 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 SPI1P17947 270 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 GDI2P50395 445 aaKnown RBP8.62□□□□□ -1.03
PDPN-212ENST00000621990 PGDP52209 483 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 AGFG1P52594 562 aaKnown RBP8.62□□□□□ -1.03
PDPN-212ENST00000621990 SLC25A1P53007 311 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 HCCSP53701 268 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 SLC37A1P57057 533 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 GPR176Q14439 515 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 NNATQ16517 81 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 LINC01590Q5TEZ4 76 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 WBP2NLQ6ICG8 309 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 IL20RBQ6UXL0 311 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 OVCH1Q7RTY7 1134 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 FAM122BQ7Z309 247 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 LRRC75AQ8NAA5 344 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 OR13C5Q8NGS8 318 aa8.62□□□□□ -1.03
PDPN-212ENST00000621990 PTPMT1Q8WUK0 201 aaPredicted RBP8.62□□□□□ -1.03
PDPN-212ENST00000621990 RNF166Q96A37 237 aaPredicted RBP8.62□□□□□ -1.03
PDPN-212ENST00000621990 MMABQ96EY8 250 aaPredicted RBP8.62□□□□□ -1.03
PDPN-212ENST00000621990 FYTTD1Q96QD9 318 aaKnown RBP8.62□□□□□ -1.03
PDPN-212ENST00000621990 ABHD1Q96SE0 405 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms