RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 ZNF443Q9Y2A4 671 aaPredicted RBP14.49□□□□□ -0.09
CD40-207ENST00000620709 PRRC2AP48634 2157 aaKnown RBP14.48□□□□□ -0.09
CD40-207ENST00000620709 MED12LQ86YW9 2145 aa14.48□□□□□ -0.09
CD40-207ENST00000620709 AGAP5A6NIR3 686 aa14.48□□□□□ -0.09
CD40-207ENST00000620709 B4DXG7 233 aa14.48□□□□□ -0.09
CD40-207ENST00000620709 FADS1O60427 444 aa14.48□□□□□ -0.09
CD40-207ENST00000620709 TGM6O95932 706 aa14.48□□□□□ -0.09
CD40-207ENST00000620709 DBIP07108 87 aaKnown RBP14.48□□□□□ -0.09
CD40-207ENST00000620709 RRM2P31350 389 aa14.48□□□□□ -0.09
CD40-207ENST00000620709 SPIBQ01892 262 aa14.48□□□□□ -0.09
CD40-207ENST00000620709 DAG1Q14118 895 aa14.48□□□□□ -0.09
CD40-207ENST00000620709 DAZAP2Q15038 168 aaPredicted RBP14.48□□□□□ -0.09
CD40-207ENST00000620709 LIN52Q52LA3 116 aa14.48□□□□□ -0.09
CD40-207ENST00000620709 OTUD3Q5T2D3 398 aaPredicted RBP14.48□□□□□ -0.09
CD40-207ENST00000620709 AP1ARQ63HQ0 302 aa14.48□□□□□ -0.09
CD40-207ENST00000620709 HMGN2P46Q86SG4 172 aa14.48□□□□□ -0.09
CD40-207ENST00000620709 STK32CQ86UX6 486 aa14.48□□□□□ -0.09
CD40-207ENST00000620709 CYP4Z1Q86W10 505 aa14.48□□□□□ -0.09
CD40-207ENST00000620709 VRK2Q86Y07 508 aa14.48□□□□□ -0.09
CD40-207ENST00000620709 MEIOBQ8N635 442 aa14.48□□□□□ -0.09
CD40-207ENST00000620709 VANGL1Q8TAA9 524 aaPredicted RBP14.48□□□□□ -0.09
CD40-207ENST00000620709 EPYCQ99645 322 aa14.48□□□□□ -0.09
CD40-207ENST00000620709 PIP5K1AQ99755 562 aa14.48□□□□□ -0.09
CD40-207ENST00000620709 RSPO3Q9BXY4 272 aaPredicted RBP14.48□□□□□ -0.09
CD40-207ENST00000620709 PTGES2Q9H7Z7 377 aa14.48□□□□□ -0.09
CD40-207ENST00000620709 VNN3Q9NY84 501 aa14.48□□□□□ -0.09
CD40-207ENST00000620709 CLCF1Q9UBD9 225 aa14.48□□□□□ -0.09
CD40-207ENST00000620709 RAB26Q9ULW5 256 aa14.48□□□□□ -0.09
CD40-207ENST00000620709 MRPS18CQ9Y3D5 142 aaKnown RBP14.48□□□□□ -0.09
CD40-207ENST00000620709 U3KQV3 271 aa14.48□□□□□ -0.09
CD40-207ENST00000620709 FAM221AA4D161 298 aa14.47□□□□□ -0.09
CD40-207ENST00000620709 SLC22A20A6NK97 555 aa14.47□□□□□ -0.09
CD40-207ENST00000620709 H3BML4 177 aa14.47□□□□□ -0.09
CD40-207ENST00000620709 UTS2O95399 124 aa14.47□□□□□ -0.09
CD40-207ENST00000620709 HPRP00739 348 aa14.47□□□□□ -0.09
CD40-207ENST00000620709 PEPDP12955 493 aa14.47□□□□□ -0.09
CD40-207ENST00000620709 CD99P14209 185 aa14.47□□□□□ -0.09
CD40-207ENST00000620709 UQCRBP14927 111 aa14.47□□□□□ -0.09
CD40-207ENST00000620709 IL7RP16871 459 aa14.47□□□□□ -0.09
CD40-207ENST00000620709 ALDH3A2P51648 485 aa14.47□□□□□ -0.09
CD40-207ENST00000620709 PSMD4P55036 377 aaKnown RBP14.47□□□□□ -0.09
CD40-207ENST00000620709 B3GALT5-AS1P59052 145 aa14.47□□□□□ -0.09
CD40-207ENST00000620709 SORDQ00796 357 aa14.47□□□□□ -0.09
CD40-207ENST00000620709 GK3PQ14409 553 aa14.47□□□□□ -0.09
CD40-207ENST00000620709 FADS6Q8N9I5 356 aa14.47□□□□□ -0.09
CD40-207ENST00000620709 ZG16BQ96DA0 208 aa14.47□□□□□ -0.09
CD40-207ENST00000620709 ARHGDIGQ99819 225 aa14.47□□□□□ -0.09
CD40-207ENST00000620709 FOXC2Q99958 501 aa14.47□□□□□ -0.09
CD40-207ENST00000620709 RBM4BQ9BQ04 359 aaKnown RBP14.47□□□□□ -0.09
CD40-207ENST00000620709 RBM4Q9BWF3 364 aaKnown RBP14.47□□□□□ -0.09
CD40-207ENST00000620709 OSBPL10Q9BXB5 764 aa14.47□□□□□ -0.09
CD40-207ENST00000620709 TBL1XR1Q9BZK7 514 aa14.47□□□□□ -0.09
CD40-207ENST00000620709 RTN4RQ9BZR6 473 aa14.47□□□□□ -0.09
CD40-207ENST00000620709 GABARAPL1Q9H0R8 117 aa14.47□□□□□ -0.09
CD40-207ENST00000620709 PIGMQ9H3S5 423 aa14.47□□□□□ -0.09
CD40-207ENST00000620709 Q9H521 79 aa14.47□□□□□ -0.09
CD40-207ENST00000620709 FBXO34Q9NWN3 711 aa14.47□□□□□ -0.09
CD40-207ENST00000620709 LRCH1Q9Y2L9 728 aa14.47□□□□□ -0.09
CD40-207ENST00000620709 TESMINQ9Y4I5 508 aa14.47□□□□□ -0.09
CD40-207ENST00000620709 SH3D21A4FU49 640 aa14.46□□□□□ -0.09
CD40-207ENST00000620709 H0YC42 278 aa14.46□□□□□ -0.09
CD40-207ENST00000620709 M0R3H8 397 aa14.46□□□□□ -0.09
CD40-207ENST00000620709 CASKO14936 926 aa14.46□□□□□ -0.09
CD40-207ENST00000620709 IL33O95760 270 aa14.46□□□□□ -0.09
CD40-207ENST00000620709 NID1P14543 1247 aa14.46□□□□□ -0.09
CD40-207ENST00000620709 YAP1P46937 504 aaKnown RBP14.46□□□□□ -0.09
CD40-207ENST00000620709 TPD52P55327 224 aaPredicted RBP14.46□□□□□ -0.09
CD40-207ENST00000620709 SIRPAP78324 504 aa14.46□□□□□ -0.09
CD40-207ENST00000620709 PPP1R8Q12972 351 aaKnown RBP14.46□□□□□ -0.09
CD40-207ENST00000620709 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.46□□□□□ -0.09
CD40-207ENST00000620709 TBPL2Q6SJ96 375 aa14.46□□□□□ -0.09
CD40-207ENST00000620709 DEF8Q6ZN54 512 aa14.46□□□□□ -0.09
CD40-207ENST00000620709 ZNF836Q6ZNA1 936 aa14.46□□□□□ -0.09
CD40-207ENST00000620709 TMEM179BQ7Z7N9 219 aa14.46□□□□□ -0.09
CD40-207ENST00000620709 ADGRE4PQ86SQ3 457 aa14.46□□□□□ -0.09
CD40-207ENST00000620709 COMTD1Q86VU5 262 aa14.46□□□□□ -0.09
CD40-207ENST00000620709 MAGEE2Q8TD90 523 aaPredicted RBP14.46□□□□□ -0.09
CD40-207ENST00000620709 RNF138Q8WVD3 245 aa14.46□□□□□ -0.09
CD40-207ENST00000620709 UCN2Q96RP3 112 aa14.46□□□□□ -0.09
CD40-207ENST00000620709 ARMC7Q9H6L4 198 aa14.46□□□□□ -0.09
CD40-207ENST00000620709 USE1Q9NZ43 259 aa14.46□□□□□ -0.09
CD40-207ENST00000620709 ZNF337Q9Y3M9 751 aa14.46□□□□□ -0.09
CD40-207ENST00000620709 LYVE1Q9Y5Y7 322 aa14.46□□□□□ -0.09
CD40-207ENST00000620709 MTORP42345 2549 aa14.46□□□□□ -0.09
CD40-207ENST00000620709 ZFHX3Q15911 3703 aa14.46□□□□□ -0.1
CD40-207ENST00000620709 A0A1W2PNV4 684 aa14.46□□□□□ -0.1
CD40-207ENST00000620709 C7orf72A4D263 438 aa14.46□□□□□ -0.1
CD40-207ENST00000620709 SHISA8B8ZZ34 492 aa14.46□□□□□ -0.1
CD40-207ENST00000620709 J3KTA2 159 aa14.46□□□□□ -0.1
CD40-207ENST00000620709 TNFRSF11BO00300 401 aa14.46□□□□□ -0.1
CD40-207ENST00000620709 IGKV1D-16P01601 117 aa14.46□□□□□ -0.1
CD40-207ENST00000620709 CDH12P55289 794 aa14.46□□□□□ -0.1
CD40-207ENST00000620709 KEAP1Q14145 624 aa14.46□□□□□ -0.1
CD40-207ENST00000620709 BCL2A1Q16548 175 aa14.46□□□□□ -0.1
CD40-207ENST00000620709 RNF220Q5VTB9 566 aa14.46□□□□□ -0.1
CD40-207ENST00000620709 OR4D11Q8NGI4 311 aa14.46□□□□□ -0.1
CD40-207ENST00000620709 SMPD3Q9NY59 655 aaPredicted RBP14.46□□□□□ -0.1
CD40-207ENST00000620709 MAGED1Q9Y5V3 778 aaPredicted RBP14.46□□□□□ -0.1
CD40-207ENST00000620709 AP4B1Q9Y6B7 739 aa14.46□□□□□ -0.1
CD40-207ENST00000620709 PCNX3Q9H6A9 2034 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms