RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 USF3Q68DE3 2245 aa15.13■□□□□ 0.01
HMGN3-203ENST00000620514 TMEM247A6NEH6 219 aa15.13■□□□□ 0.01
HMGN3-203ENST00000620514 TRIM64A6NGJ6 449 aa15.13■□□□□ 0.01
HMGN3-203ENST00000620514 TRIM64BA6NI03 449 aa15.13■□□□□ 0.01
HMGN3-203ENST00000620514 H7C1Q1 480 aa15.13■□□□□ 0.01
HMGN3-203ENST00000620514 FRS3O43559 492 aa15.13■□□□□ 0.01
HMGN3-203ENST00000620514 PGM3O95394 542 aa15.13■□□□□ 0.01
HMGN3-203ENST00000620514 BMP2P12643 396 aa15.13■□□□□ 0.01
HMGN3-203ENST00000620514 IDUAP35475 653 aa15.13■□□□□ 0.01
HMGN3-203ENST00000620514 HOXC5Q00444 222 aa15.13■□□□□ 0.01
HMGN3-203ENST00000620514 FAPQ12884 760 aa15.13■□□□□ 0.01
HMGN3-203ENST00000620514 CEACAM7Q14002 265 aa15.13■□□□□ 0.01
HMGN3-203ENST00000620514 SLC17A1Q14916 467 aa15.13■□□□□ 0.01
HMGN3-203ENST00000620514 OR7A5Q15622 319 aa15.13■□□□□ 0.01
HMGN3-203ENST00000620514 ZNF311Q5JNZ3 666 aa15.13■□□□□ 0.01
HMGN3-203ENST00000620514 TIMM23BQ5SRD1 257 aa15.13■□□□□ 0.01
HMGN3-203ENST00000620514 LRIF1Q5T3J3 769 aa15.13■□□□□ 0.01
HMGN3-203ENST00000620514 WBP2NLQ6ICG8 309 aa15.13■□□□□ 0.01
HMGN3-203ENST00000620514 PRSS57Q6UWY2 283 aa15.13■□□□□ 0.01
HMGN3-203ENST00000620514 CASP12Q6UXS9 341 aa15.13■□□□□ 0.01
HMGN3-203ENST00000620514 GOLGA6L1Q8N7Z2 621 aa15.13■□□□□ 0.01
HMGN3-203ENST00000620514 TMEM99Q8N816 258 aa15.13■□□□□ 0.01
HMGN3-203ENST00000620514 OR52E4Q8NGH9 312 aa15.13■□□□□ 0.01
HMGN3-203ENST00000620514 SPDL1Q96EA4 605 aa15.13■□□□□ 0.01
HMGN3-203ENST00000620514 POM121Q96HA1 1249 aa15.13■□□□□ 0.01
HMGN3-203ENST00000620514 NAA11Q9BSU3 229 aaPredicted RBP15.13■□□□□ 0.01
HMGN3-203ENST00000620514 BCL2L10Q9HD36 194 aa15.13■□□□□ 0.01
HMGN3-203ENST00000620514 NPAP1Q9NZP6 1156 aa15.13■□□□□ 0.01
HMGN3-203ENST00000620514 ZNF232Q9UNY5 417 aa15.13■□□□□ 0.01
HMGN3-203ENST00000620514 LAMP3Q9UQV4 416 aa15.13■□□□□ 0.01
HMGN3-203ENST00000620514 FLVCR1Q9Y5Y0 555 aa15.13■□□□□ 0.01
HMGN3-203ENST00000620514 CADP27708 2225 aa15.12■□□□□ 0.01
HMGN3-203ENST00000620514 A0A1W2PR80 420 aa15.12■□□□□ 0.01
HMGN3-203ENST00000620514 LIPT2A6NK58 231 aa15.12■□□□□ 0.01
HMGN3-203ENST00000620514 OR5H1A6NKK0 313 aa15.12■□□□□ 0.01
HMGN3-203ENST00000620514 CCT8L1PA6NM43 557 aa15.12■□□□□ 0.01
HMGN3-203ENST00000620514 EIF1BO60739 113 aaKnown RBP15.12■□□□□ 0.01
HMGN3-203ENST00000620514 AKR7A3O95154 331 aa15.12■□□□□ 0.01
HMGN3-203ENST00000620514 SOD3P08294 240 aa15.12■□□□□ 0.01
HMGN3-203ENST00000620514 HOXB4P17483 251 aaPredicted RBP15.12■□□□□ 0.01
HMGN3-203ENST00000620514 NCF2P19878 526 aaPredicted RBP15.12■□□□□ 0.01
HMGN3-203ENST00000620514 MAP2K6P52564 334 aa15.12■□□□□ 0.01
HMGN3-203ENST00000620514 COPZ1P61923 177 aa15.12■□□□□ 0.01
HMGN3-203ENST00000620514 FADDQ13158 208 aa15.12■□□□□ 0.01
HMGN3-203ENST00000620514 ZNF672Q499Z4 452 aaPredicted RBP15.12■□□□□ 0.01
HMGN3-203ENST00000620514 AGKQ53H12 422 aa15.12■□□□□ 0.01
HMGN3-203ENST00000620514 OTUD3Q5T2D3 398 aaPredicted RBP15.12■□□□□ 0.01
HMGN3-203ENST00000620514 C9orf135Q5VTT2 229 aa15.12■□□□□ 0.01
HMGN3-203ENST00000620514 PAQR6Q6TCH4 344 aa15.12■□□□□ 0.01
HMGN3-203ENST00000620514 BBS10Q8TAM1 723 aa15.12■□□□□ 0.01
HMGN3-203ENST00000620514 FBXW5Q969U6 566 aa15.12■□□□□ 0.01
HMGN3-203ENST00000620514 C3orf49Q96BT1 292 aa15.12■□□□□ 0.01
HMGN3-203ENST00000620514 MUCL1Q96DR8 90 aa15.12■□□□□ 0.01
HMGN3-203ENST00000620514 THOC1Q96FV9 657 aaKnown RBP15.12■□□□□ 0.01
HMGN3-203ENST00000620514 RAD21L1Q9H4I0 556 aa15.12■□□□□ 0.01
HMGN3-203ENST00000620514 ZNF701Q9NV72 531 aaPredicted RBP15.12■□□□□ 0.01
HMGN3-203ENST00000620514 ASB6Q9NWX5 421 aa15.12■□□□□ 0.01
HMGN3-203ENST00000620514 VAPAQ9P0L0 249 aa15.12■□□□□ 0.01
HMGN3-203ENST00000620514 MALT1Q9UDY8 824 aa15.12■□□□□ 0.01
HMGN3-203ENST00000620514 IFT52Q9Y366 437 aa15.12■□□□□ 0.01
HMGN3-203ENST00000620514 CIB4A0PJX0 185 aa15.11■□□□□ 0.01
HMGN3-203ENST00000620514 GPIP06744 558 aa15.11■□□□□ 0.01
HMGN3-203ENST00000620514 ITGA5P08648 1049 aa15.11■□□□□ 0.01
HMGN3-203ENST00000620514 PAX1P15863 534 aa15.11■□□□□ 0.01
HMGN3-203ENST00000620514 ZSWIM7Q19AV6 140 aa15.11■□□□□ 0.01
HMGN3-203ENST00000620514 GCNT6Q5T4J0 391 aa15.11■□□□□ 0.01
HMGN3-203ENST00000620514 ZIC4Q8N9L1 334 aa15.11■□□□□ 0.01
HMGN3-203ENST00000620514 OR52N5Q8NH56 324 aa15.11■□□□□ 0.01
HMGN3-203ENST00000620514 NFKBIDQ8NI38 313 aa15.11■□□□□ 0.01
HMGN3-203ENST00000620514 COX4I2Q96KJ9 171 aa15.11■□□□□ 0.01
HMGN3-203ENST00000620514 TRIM2Q9C040 744 aa15.11■□□□□ 0.01
HMGN3-203ENST00000620514 IKZF5Q9H5V7 419 aa15.11■□□□□ 0.01
HMGN3-203ENST00000620514 CXorf56Q9H5V9 222 aa15.11■□□□□ 0.01
HMGN3-203ENST00000620514 CACYBPQ9HB71 228 aaKnown RBP15.11■□□□□ 0.01
HMGN3-203ENST00000620514 SLC7A10Q9NS82 523 aa15.11■□□□□ 0.01
HMGN3-203ENST00000620514 INTS9Q9NV88 658 aaKnown RBP15.11■□□□□ 0.01
HMGN3-203ENST00000620514 SLC9A8Q9Y2E8 581 aa15.11■□□□□ 0.01
HMGN3-203ENST00000620514 TRBV5-3A0A0A0MS03 114 aa15.1■□□□□ 0.01
HMGN3-203ENST00000620514 A8MVM7 634 aa15.1■□□□□ 0.01
HMGN3-203ENST00000620514 HMGB1P1B2RPK0 211 aaPredicted RBP15.1■□□□□ 0.01
HMGN3-203ENST00000620514 TMEM229AB2RXF0 380 aa15.1■□□□□ 0.01
HMGN3-203ENST00000620514 SHISA9B4DS77 424 aa15.1■□□□□ 0.01
HMGN3-203ENST00000620514 C5orf58C9J3I9 102 aa15.1■□□□□ 0.01
HMGN3-203ENST00000620514 PDLIM1O00151 329 aa15.1■□□□□ 0.01
HMGN3-203ENST00000620514 SMAD7O15105 426 aaKnown RBP15.1■□□□□ 0.01
HMGN3-203ENST00000620514 DANCRP0C864 163 aa15.1■□□□□ 0.01
HMGN3-203ENST00000620514 ARAFP10398 606 aa15.1■□□□□ 0.01
HMGN3-203ENST00000620514 ATP4BP51164 291 aa15.1■□□□□ 0.01
HMGN3-203ENST00000620514 P2RY4P51582 365 aa15.1■□□□□ 0.01
HMGN3-203ENST00000620514 ATP5J2P56134 94 aa15.1■□□□□ 0.01
HMGN3-203ENST00000620514 RPS4XP62701 263 aaKnown RBP15.1■□□□□ 0.01
HMGN3-203ENST00000620514 SQLEQ14534 574 aa15.1■□□□□ 0.01
HMGN3-203ENST00000620514 GABRA6Q16445 453 aa15.1■□□□□ 0.01
HMGN3-203ENST00000620514 TSPO2Q5TGU0 170 aa15.1■□□□□ 0.01
HMGN3-203ENST00000620514 C1orf140Q5VVS0 124 aa15.1■□□□□ 0.01
HMGN3-203ENST00000620514 PRAMEF8Q5VWM4 474 aa15.1■□□□□ 0.01
HMGN3-203ENST00000620514 PRAMEF7Q5VXH5 474 aa15.1■□□□□ 0.01
HMGN3-203ENST00000620514 CLEC9AQ6UXN8 241 aa15.1■□□□□ 0.01
HMGN3-203ENST00000620514 HDXQ7Z353 690 aa15.1■□□□□ 0.01
HMGN3-203ENST00000620514 COMTD1Q86VU5 262 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms