RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 OR7A5Q15622 319 aa14.01□□□□□ -0.17
PCDHGC3-204ENST00000617222 EIF2S3LQ2VIR3 472 aaKnown RBP14.01□□□□□ -0.17
PCDHGC3-204ENST00000617222 C5orf46Q6UWT4 87 aa14.01□□□□□ -0.17
PCDHGC3-204ENST00000617222 PLXDC2Q6UX71 529 aa14.01□□□□□ -0.17
PCDHGC3-204ENST00000617222 C3P1Q6ZMU1 363 aa14.01□□□□□ -0.17
PCDHGC3-204ENST00000617222 ZNF730Q6ZMV8 503 aa14.01□□□□□ -0.17
PCDHGC3-204ENST00000617222 C10orf53Q8N6V4 93 aa14.01□□□□□ -0.17
PCDHGC3-204ENST00000617222 SLC7A13Q8TCU3 470 aa14.01□□□□□ -0.17
PCDHGC3-204ENST00000617222 ACOT11Q8WXI4 607 aaPredicted RBP14.01□□□□□ -0.17
PCDHGC3-204ENST00000617222 SLC25A36Q96CQ1 311 aa14.01□□□□□ -0.17
PCDHGC3-204ENST00000617222 TRIB1Q96RU8 372 aa14.01□□□□□ -0.17
PCDHGC3-204ENST00000617222 PTDSS2Q9BVG9 487 aa14.01□□□□□ -0.17
PCDHGC3-204ENST00000617222 TAPBPLQ9BX59 468 aa14.01□□□□□ -0.17
PCDHGC3-204ENST00000617222 SRXN1Q9BYN0 137 aa14.01□□□□□ -0.17
PCDHGC3-204ENST00000617222 TP63Q9H3D4 680 aaPredicted RBP14.01□□□□□ -0.17
PCDHGC3-204ENST00000617222 TIGARQ9NQ88 270 aa14.01□□□□□ -0.17
PCDHGC3-204ENST00000617222 ARMC1Q9NVT9 282 aa14.01□□□□□ -0.17
PCDHGC3-204ENST00000617222 VNN3Q9NY84 501 aa14.01□□□□□ -0.17
PCDHGC3-204ENST00000617222 TRAPPC4Q9Y296 219 aa14.01□□□□□ -0.17
PCDHGC3-204ENST00000617222 MED31Q9Y3C7 131 aa14.01□□□□□ -0.17
PCDHGC3-204ENST00000617222 CHD6Q8TD26 2715 aa14□□□□□ -0.17
PCDHGC3-204ENST00000617222 NBASA2RRP1 2371 aa14□□□□□ -0.17
PCDHGC3-204ENST00000617222 LIPT2A6NK58 231 aa14□□□□□ -0.17
PCDHGC3-204ENST00000617222 PIP5K1CO60331 668 aa14□□□□□ -0.17
PCDHGC3-204ENST00000617222 PMS2P2O95744 297 aa14□□□□□ -0.17
PCDHGC3-204ENST00000617222 FPR1P21462 350 aa14□□□□□ -0.17
PCDHGC3-204ENST00000617222 CBLP22681 906 aa14□□□□□ -0.17
PCDHGC3-204ENST00000617222 ACVR2AP27037 513 aa14□□□□□ -0.17
PCDHGC3-204ENST00000617222 UQCRFS1P47985 274 aa14□□□□□ -0.17
PCDHGC3-204ENST00000617222 HMGA2P52926 109 aa14□□□□□ -0.17
PCDHGC3-204ENST00000617222 RAC3P60763 192 aa14□□□□□ -0.17
PCDHGC3-204ENST00000617222 CSNK2A1P68400 391 aaPredicted RBP14□□□□□ -0.17
PCDHGC3-204ENST00000617222 LTBQ06643 244 aa14□□□□□ -0.17
PCDHGC3-204ENST00000617222 SEC23BQ15437 767 aa14□□□□□ -0.17
PCDHGC3-204ENST00000617222 ACSF3Q4G176 576 aaPredicted RBP14□□□□□ -0.17
PCDHGC3-204ENST00000617222 C1orf185Q5T7R7 199 aa14□□□□□ -0.17
PCDHGC3-204ENST00000617222 RTL6Q6ICC9 239 aa14□□□□□ -0.17
PCDHGC3-204ENST00000617222 PPP4R4Q6NUP7 873 aa14□□□□□ -0.17
PCDHGC3-204ENST00000617222 RPTNQ6XPR3 784 aa14□□□□□ -0.17
PCDHGC3-204ENST00000617222 MBOAT2Q6ZWT7 520 aa14□□□□□ -0.17
PCDHGC3-204ENST00000617222 RRM2BQ7LG56 351 aa14□□□□□ -0.17
PCDHGC3-204ENST00000617222 NRMQ8IXM6 262 aa14□□□□□ -0.17
PCDHGC3-204ENST00000617222 PFN4Q8NHR9 129 aa14□□□□□ -0.17
PCDHGC3-204ENST00000617222 MFSD8Q8NHS3 518 aa14□□□□□ -0.17
PCDHGC3-204ENST00000617222 ROBO4Q8WZ75 1007 aa14□□□□□ -0.17
PCDHGC3-204ENST00000617222 ALPK1Q96QP1 1244 aa14□□□□□ -0.17
PCDHGC3-204ENST00000617222 FUZQ9BT04 418 aa14□□□□□ -0.17
PCDHGC3-204ENST00000617222 SLC19A3Q9BZV2 496 aa14□□□□□ -0.17
PCDHGC3-204ENST00000617222 REEP1Q9H902 201 aa14□□□□□ -0.17
PCDHGC3-204ENST00000617222 MEPEQ9NQ76 525 aaPredicted RBP14□□□□□ -0.17
PCDHGC3-204ENST00000617222 PAQR5Q9NXK6 330 aaPredicted RBP14□□□□□ -0.17
PCDHGC3-204ENST00000617222 DNAJB9Q9UBS3 223 aa14□□□□□ -0.17
PCDHGC3-204ENST00000617222 TMCC3Q9ULS5 477 aa14□□□□□ -0.17
PCDHGC3-204ENST00000617222 SAMHD1Q9Y3Z3 626 aaKnown RBP14□□□□□ -0.17
PCDHGC3-204ENST00000617222 LYVE1Q9Y5Y7 322 aa14□□□□□ -0.17
PCDHGC3-204ENST00000617222 U3KQV3 271 aa14□□□□□ -0.17
PCDHGC3-204ENST00000617222 ZGRF1Q86YA3 2104 aa14□□□□□ -0.17
PCDHGC3-204ENST00000617222 GTF3C1Q12789 2109 aa13.99□□□□□ -0.17
PCDHGC3-204ENST00000617222 RP1L1Q8IWN7 2480 aaPredicted RBP13.99□□□□□ -0.17
PCDHGC3-204ENST00000617222 IGHV3-15A0A0B4J1V0 119 aa13.99□□□□□ -0.17
PCDHGC3-204ENST00000617222 KDM4EB2RXH2 506 aaPredicted RBP13.99□□□□□ -0.17
PCDHGC3-204ENST00000617222 LRRN3E7EW58 273 aa13.99□□□□□ -0.17
PCDHGC3-204ENST00000617222 CLOCKO15516 846 aa13.99□□□□□ -0.17
PCDHGC3-204ENST00000617222 HNRNPRO43390 633 aaKnown RBP13.99□□□□□ -0.17
PCDHGC3-204ENST00000617222 OR2T1O43869 369 aa13.99□□□□□ -0.17
PCDHGC3-204ENST00000617222 SYNGR4O95473 234 aa13.99□□□□□ -0.17
PCDHGC3-204ENST00000617222 CH25HO95992 272 aa13.99□□□□□ -0.17
PCDHGC3-204ENST00000617222 BGLAPP02818 100 aa13.99□□□□□ -0.17
PCDHGC3-204ENST00000617222 STSP08842 583 aa13.99□□□□□ -0.17
PCDHGC3-204ENST00000617222 HOXD4P09016 255 aaPredicted RBP13.99□□□□□ -0.17
PCDHGC3-204ENST00000617222 KLK2P20151 261 aa13.99□□□□□ -0.17
PCDHGC3-204ENST00000617222 ENPP1P22413 925 aa13.99□□□□□ -0.17
PCDHGC3-204ENST00000617222 FASP25445 335 aa13.99□□□□□ -0.17
PCDHGC3-204ENST00000617222 PTGER4P35408 488 aa13.99□□□□□ -0.17
PCDHGC3-204ENST00000617222 CA7P43166 264 aa13.99□□□□□ -0.17
PCDHGC3-204ENST00000617222 SLC35A1P78382 337 aa13.99□□□□□ -0.17
PCDHGC3-204ENST00000617222 PON3Q15166 354 aa13.99□□□□□ -0.17
PCDHGC3-204ENST00000617222 EXOC3L2Q2M3D2 409 aa13.99□□□□□ -0.17
PCDHGC3-204ENST00000617222 FAM69AQ5T7M9 428 aa13.99□□□□□ -0.17
PCDHGC3-204ENST00000617222 ZFP1Q6P2D0 407 aa13.99□□□□□ -0.17
PCDHGC3-204ENST00000617222 MEX3DQ86XN8 651 aaKnown RBP13.99□□□□□ -0.17
PCDHGC3-204ENST00000617222 RNF113BQ8IZP6 322 aaKnown RBP13.99□□□□□ -0.17
PCDHGC3-204ENST00000617222 OR4C15Q8NGM1 316 aa13.99□□□□□ -0.17
PCDHGC3-204ENST00000617222 PRR7Q8TB68 274 aa13.99□□□□□ -0.17
PCDHGC3-204ENST00000617222 CPNE4Q96A23 557 aaPredicted RBP13.99□□□□□ -0.17
PCDHGC3-204ENST00000617222 SGTBQ96EQ0 304 aa13.99□□□□□ -0.17
PCDHGC3-204ENST00000617222 PRRG4Q9BZD6 226 aa13.99□□□□□ -0.17
PCDHGC3-204ENST00000617222 KLHL4Q9C0H6 718 aa13.99□□□□□ -0.17
PCDHGC3-204ENST00000617222 CALHM2Q9HA72 323 aa13.99□□□□□ -0.17
PCDHGC3-204ENST00000617222 S100A14Q9HCY8 104 aa13.99□□□□□ -0.17
PCDHGC3-204ENST00000617222 C20orf141Q9NUB4 165 aa13.99□□□□□ -0.17
PCDHGC3-204ENST00000617222 MCTS1Q9ULC4 181 aaKnown RBP13.99□□□□□ -0.17
PCDHGC3-204ENST00000617222 FAM215AQ9Y5M1 114 aa13.99□□□□□ -0.17
PCDHGC3-204ENST00000617222 SH3PXD2BA1X283 911 aa13.98□□□□□ -0.17
PCDHGC3-204ENST00000617222 ENO4A6NNW6 628 aa13.98□□□□□ -0.17
PCDHGC3-204ENST00000617222 FTCDNL1E5RQL4 147 aa13.98□□□□□ -0.17
PCDHGC3-204ENST00000617222 H3BNX3 289 aa13.98□□□□□ -0.17
PCDHGC3-204ENST00000617222 PYCARD-AS1I3L0S3 204 aa13.98□□□□□ -0.17
PCDHGC3-204ENST00000617222 DEAF1O75398 565 aaPredicted RBP13.98□□□□□ -0.17
PCDHGC3-204ENST00000617222 TGM6O95932 706 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms