RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 LIMS3P0CW19 117 aa14.28□□□□□ -0.12
SEMA3B-212ENST00000616701 LIMS4P0CW20 117 aa14.28□□□□□ -0.12
SEMA3B-212ENST00000616701 UGT2B10P36537 528 aa14.28□□□□□ -0.12
SEMA3B-212ENST00000616701 RAB40BQ12829 278 aa14.28□□□□□ -0.12
SEMA3B-212ENST00000616701 BTN1A1Q13410 526 aa14.28□□□□□ -0.12
SEMA3B-212ENST00000616701 CBLN3Q6UW01 205 aa14.28□□□□□ -0.12
SEMA3B-212ENST00000616701 OAFQ86UD1 273 aa14.28□□□□□ -0.12
SEMA3B-212ENST00000616701 SIRT6Q8N6T7 355 aa14.28□□□□□ -0.12
SEMA3B-212ENST00000616701 KBTBD8Q8NFY9 601 aa14.28□□□□□ -0.12
SEMA3B-212ENST00000616701 PHOSPHO1Q8TCT1 267 aa14.28□□□□□ -0.12
SEMA3B-212ENST00000616701 TTC9Q92623 222 aa14.28□□□□□ -0.12
SEMA3B-212ENST00000616701 NUDT9Q9BW91 350 aa14.28□□□□□ -0.12
SEMA3B-212ENST00000616701 ZNF224Q9NZL3 707 aa14.28□□□□□ -0.12
SEMA3B-212ENST00000616701 PRODH2Q9UF12 536 aa14.28□□□□□ -0.12
SEMA3B-212ENST00000616701 SERTAD3Q9UJW9 196 aa14.28□□□□□ -0.12
SEMA3B-212ENST00000616701 BLACEA4D250 179 aa14.28□□□□□ -0.12
SEMA3B-212ENST00000616701 STMND1H3BQB6 276 aa14.28□□□□□ -0.12
SEMA3B-212ENST00000616701 BHLHE40O14503 412 aa14.28□□□□□ -0.12
SEMA3B-212ENST00000616701 TSC22D2O75157 780 aa14.28□□□□□ -0.12
SEMA3B-212ENST00000616701 REM1O75628 298 aa14.28□□□□□ -0.12
SEMA3B-212ENST00000616701 LALBAP00709 142 aa14.28□□□□□ -0.12
SEMA3B-212ENST00000616701 MRPL3P09001 348 aaKnown RBP14.28□□□□□ -0.12
SEMA3B-212ENST00000616701 IFI6P09912 130 aa14.28□□□□□ -0.12
SEMA3B-212ENST00000616701 HPGDP15428 266 aa14.28□□□□□ -0.12
SEMA3B-212ENST00000616701 NOS3P29474 1203 aa14.28□□□□□ -0.12
SEMA3B-212ENST00000616701 OR2B6P58173 313 aa14.28□□□□□ -0.12
SEMA3B-212ENST00000616701 RPS7P62081 194 aaKnown RBP14.28□□□□□ -0.12
SEMA3B-212ENST00000616701 RNF113BQ8IZP6 322 aaKnown RBP14.28□□□□□ -0.12
SEMA3B-212ENST00000616701 FAM83FQ8NEG4 500 aaPredicted RBP14.28□□□□□ -0.12
SEMA3B-212ENST00000616701 OR9Q1Q8NGQ5 310 aa14.28□□□□□ -0.12
SEMA3B-212ENST00000616701 BRIX1Q8TDN6 353 aaKnown RBP14.28□□□□□ -0.12
SEMA3B-212ENST00000616701 TRIM2Q9C040 744 aa14.28□□□□□ -0.12
SEMA3B-212ENST00000616701 C14orf105Q9NVL8 296 aa14.28□□□□□ -0.12
SEMA3B-212ENST00000616701 CFIP05156 583 aa14.27□□□□□ -0.12
SEMA3B-212ENST00000616701 TSPAN19P0C672 248 aa14.27□□□□□ -0.12
SEMA3B-212ENST00000616701 CRYBB2P43320 205 aa14.27□□□□□ -0.12
SEMA3B-212ENST00000616701 CAPZA2P47755 286 aa14.27□□□□□ -0.12
SEMA3B-212ENST00000616701 AGAP6Q5VW22 663 aa14.27□□□□□ -0.12
SEMA3B-212ENST00000616701 ZNF501Q96CX3 271 aaPredicted RBP14.27□□□□□ -0.12
SEMA3B-212ENST00000616701 SLC41A2Q96JW4 573 aa14.27□□□□□ -0.12
SEMA3B-212ENST00000616701 AGAP4Q96P64 663 aa14.27□□□□□ -0.12
SEMA3B-212ENST00000616701 ASPNQ9BXN1 380 aa14.27□□□□□ -0.12
SEMA3B-212ENST00000616701 TINAGL1Q9GZM7 467 aaPredicted RBP14.27□□□□□ -0.12
SEMA3B-212ENST00000616701 MPDZO75970 2070 aa14.27□□□□□ -0.13
SEMA3B-212ENST00000616701 PLD2O14939 933 aa14.27□□□□□ -0.13
SEMA3B-212ENST00000616701 HMGN1P05114 100 aa14.27□□□□□ -0.13
SEMA3B-212ENST00000616701 LIMK1P53667 647 aa14.27□□□□□ -0.13
SEMA3B-212ENST00000616701 WNT4P56705 351 aa14.27□□□□□ -0.13
SEMA3B-212ENST00000616701 RPS25P62851 125 aaKnown RBP14.27□□□□□ -0.13
SEMA3B-212ENST00000616701 FOXK2Q01167 660 aa14.27□□□□□ -0.13
SEMA3B-212ENST00000616701 C3orf38Q5JPI3 329 aa14.27□□□□□ -0.13
SEMA3B-212ENST00000616701 C19orf48Q6RUI8 117 aa14.27□□□□□ -0.13
SEMA3B-212ENST00000616701 PHF21AQ96BD5 680 aa14.27□□□□□ -0.13
SEMA3B-212ENST00000616701 ZNF524Q96C55 264 aa14.27□□□□□ -0.13
SEMA3B-212ENST00000616701 RADILQ96JH8 1075 aa14.27□□□□□ -0.13
SEMA3B-212ENST00000616701 C12orf57Q99622 126 aa14.27□□□□□ -0.13
SEMA3B-212ENST00000616701 ZNF175Q9Y473 711 aa14.27□□□□□ -0.13
SEMA3B-212ENST00000616701 ADAMTS9Q9P2N4 1935 aa14.26□□□□□ -0.13
SEMA3B-212ENST00000616701 PATE3B3GLJ2 98 aa14.26□□□□□ -0.13
SEMA3B-212ENST00000616701 SIGLEC6O43699 453 aa14.26□□□□□ -0.13
SEMA3B-212ENST00000616701 TIAF1O95411 115 aa14.26□□□□□ -0.13
SEMA3B-212ENST00000616701 DDAH2O95865 285 aa14.26□□□□□ -0.13
SEMA3B-212ENST00000616701 PSMA1P25786 263 aaKnown RBP14.26□□□□□ -0.13
SEMA3B-212ENST00000616701 EPHA8P29322 1005 aaPredicted RBP14.26□□□□□ -0.13
SEMA3B-212ENST00000616701 MLLT11Q13015 90 aaPredicted RBP14.26□□□□□ -0.13
SEMA3B-212ENST00000616701 DSG2Q14126 1118 aa14.26□□□□□ -0.13
SEMA3B-212ENST00000616701 TBRG1Q3YBR2 411 aa14.26□□□□□ -0.13
SEMA3B-212ENST00000616701 YIF1BQ5BJH7 314 aa14.26□□□□□ -0.13
SEMA3B-212ENST00000616701 NXNL2Q5VZ03 156 aa14.26□□□□□ -0.13
SEMA3B-212ENST00000616701 TMPRSS11FQ6ZWK6 438 aa14.26□□□□□ -0.13
SEMA3B-212ENST00000616701 ZNF550Q7Z398 422 aa14.26□□□□□ -0.13
SEMA3B-212ENST00000616701 UBALD2Q8IYN6 164 aa14.26□□□□□ -0.13
SEMA3B-212ENST00000616701 PCNPQ8WW12 178 aaKnown RBP14.26□□□□□ -0.13
SEMA3B-212ENST00000616701 CEP19Q96LK0 163 aa14.26□□□□□ -0.13
SEMA3B-212ENST00000616701 FYTTD1Q96QD9 318 aaKnown RBP14.26□□□□□ -0.13
SEMA3B-212ENST00000616701 TTTY10Q9BZA0 68 aa14.26□□□□□ -0.13
SEMA3B-212ENST00000616701 RTN4RQ9BZR6 473 aa14.26□□□□□ -0.13
SEMA3B-212ENST00000616701 VN1R1Q9GZP7 353 aa14.26□□□□□ -0.13
SEMA3B-212ENST00000616701 CHRNA10Q9GZZ6 450 aa14.26□□□□□ -0.13
SEMA3B-212ENST00000616701 FGF20Q9NP95 211 aaPredicted RBP14.26□□□□□ -0.13
SEMA3B-212ENST00000616701 SNTG1Q9NSN8 517 aa14.26□□□□□ -0.13
SEMA3B-212ENST00000616701 MN1Q10571 1320 aaPredicted RBP14.26□□□□□ -0.13
SEMA3B-212ENST00000616701 GLAP06280 429 aa14.26□□□□□ -0.13
SEMA3B-212ENST00000616701 S100A6P06703 90 aa14.26□□□□□ -0.13
SEMA3B-212ENST00000616701 RPS19P39019 145 aaKnown RBP14.26□□□□□ -0.13
SEMA3B-212ENST00000616701 SLC1A3P43003 542 aa14.26□□□□□ -0.13
SEMA3B-212ENST00000616701 NR0B1P51843 470 aaKnown RBP14.26□□□□□ -0.13
SEMA3B-212ENST00000616701 C22orf42Q6IC83 251 aa14.26□□□□□ -0.13
SEMA3B-212ENST00000616701 C16orf47Q6ZP98 133 aaPredicted RBP14.26□□□□□ -0.13
SEMA3B-212ENST00000616701 SLC38A9Q8NBW4 561 aa14.26□□□□□ -0.13
SEMA3B-212ENST00000616701 ZNF721Q8TF20 911 aa14.26□□□□□ -0.13
SEMA3B-212ENST00000616701 RFKQ969G6 155 aa14.26□□□□□ -0.13
SEMA3B-212ENST00000616701 LINC00587B1AMM8 73 aa14.25□□□□□ -0.13
SEMA3B-212ENST00000616701 RCBTB2O95199 551 aa14.25□□□□□ -0.13
SEMA3B-212ENST00000616701 UTS2O95399 124 aa14.25□□□□□ -0.13
SEMA3B-212ENST00000616701 RORAP35398 523 aa14.25□□□□□ -0.13
SEMA3B-212ENST00000616701 CCL7P80098 99 aa14.25□□□□□ -0.13
SEMA3B-212ENST00000616701 SGCAQ16586 387 aa14.25□□□□□ -0.13
SEMA3B-212ENST00000616701 HLA-BQ31612 363 aa14.25□□□□□ -0.13
SEMA3B-212ENST00000616701 TIMM50Q3ZCQ8 353 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms