RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 SKAP2O75563 359 aaPredicted RBP20.35■□□□□ 0.85
MMP28-203ENST00000612672 VENTXO95231 258 aa20.35■□□□□ 0.85
MMP28-203ENST00000612672 OR4A8P0C604 315 aa20.35■□□□□ 0.85
MMP28-203ENST00000612672 G6PDP11413 515 aa20.35■□□□□ 0.85
MMP28-203ENST00000612672 KRT4P19013 534 aa20.35■□□□□ 0.85
MMP28-203ENST00000612672 CLK1P49759 484 aaKnown RBP20.35■□□□□ 0.85
MMP28-203ENST00000612672 TRIP10Q15642 601 aa20.35■□□□□ 0.85
MMP28-203ENST00000612672 TBRG1Q3YBR2 411 aa20.35■□□□□ 0.85
MMP28-203ENST00000612672 TNFAIP8L2Q6P589 184 aaPredicted RBP20.35■□□□□ 0.85
MMP28-203ENST00000612672 VHLLQ6RSH7 139 aa20.35■□□□□ 0.85
MMP28-203ENST00000612672 FNDC5Q8NAU1 212 aa20.35■□□□□ 0.85
MMP28-203ENST00000612672 MIPOL1Q8TD10 442 aa20.35■□□□□ 0.85
MMP28-203ENST00000612672 EPS8L3Q8TE67 593 aaKnown RBP20.35■□□□□ 0.85
MMP28-203ENST00000612672 TMEM45BQ96B21 275 aa20.35■□□□□ 0.85
MMP28-203ENST00000612672 SAP130Q9H0E3 1048 aa20.35■□□□□ 0.85
MMP28-203ENST00000612672 NELFAQ9H3P2 528 aa20.35■□□□□ 0.85
MMP28-203ENST00000612672 WDR45Q9Y484 360 aa20.35■□□□□ 0.85
MMP28-203ENST00000612672 NR5A2O00482 541 aa20.34■□□□□ 0.85
MMP28-203ENST00000612672 LGI1O95970 557 aa20.34■□□□□ 0.85
MMP28-203ENST00000612672 TACSTD2P09758 323 aa20.34■□□□□ 0.85
MMP28-203ENST00000612672 PRPS1L1P21108 318 aa20.34■□□□□ 0.85
MMP28-203ENST00000612672 SLC35A1P78382 337 aa20.34■□□□□ 0.85
MMP28-203ENST00000612672 EFNB3Q15768 340 aa20.34■□□□□ 0.85
MMP28-203ENST00000612672 PGS1Q32NB8 556 aa20.34■□□□□ 0.85
MMP28-203ENST00000612672 NATD1Q8N6N6 113 aa20.34■□□□□ 0.85
MMP28-203ENST00000612672 TMEM99Q8N816 258 aa20.34■□□□□ 0.85
MMP28-203ENST00000612672 ROPN1LQ96C74 230 aa20.34■□□□□ 0.85
MMP28-203ENST00000612672 BOD1Q96IK1 185 aa20.34■□□□□ 0.85
MMP28-203ENST00000612672 MYOZ1Q9NP98 299 aaPredicted RBP20.34■□□□□ 0.85
MMP28-203ENST00000612672 EXOSC3Q9NQT5 275 aaKnown RBP20.34■□□□□ 0.85
MMP28-203ENST00000612672 PARPBPQ9NWS1 579 aa20.34■□□□□ 0.85
MMP28-203ENST00000612672 TMEFF2Q9UIK5 374 aaPredicted RBP20.34■□□□□ 0.85
MMP28-203ENST00000612672 DUXAA6NLW8 204 aa20.33■□□□□ 0.85
MMP28-203ENST00000612672 B9A039 149 aa20.33■□□□□ 0.85
MMP28-203ENST00000612672 NPHS1O60500 1241 aa20.33■□□□□ 0.85
MMP28-203ENST00000612672 SCN2BO60939 215 aa20.33■□□□□ 0.85
MMP28-203ENST00000612672 WNT11O96014 354 aa20.33■□□□□ 0.85
MMP28-203ENST00000612672 CECR9P0C854 216 aa20.33■□□□□ 0.85
MMP28-203ENST00000612672 GIFP27352 417 aa20.33■□□□□ 0.85
MMP28-203ENST00000612672 PPOXP50336 477 aa20.33■□□□□ 0.85
MMP28-203ENST00000612672 KCNJ10P78508 379 aa20.33■□□□□ 0.85
MMP28-203ENST00000612672 NAAAQ02083 359 aa20.33■□□□□ 0.85
MMP28-203ENST00000612672 TGFBR3Q03167 851 aa20.33■□□□□ 0.85
MMP28-203ENST00000612672 KLHL24Q6TFL4 600 aa20.33■□□□□ 0.85
MMP28-203ENST00000612672 SEMA6DQ8NFY4 1073 aa20.33■□□□□ 0.85
MMP28-203ENST00000612672 OR9K2Q8NGE7 335 aa20.33■□□□□ 0.85
MMP28-203ENST00000612672 OR1K1Q8NGR3 316 aa20.33■□□□□ 0.85
MMP28-203ENST00000612672 XAGE5Q8WWM1 108 aa20.33■□□□□ 0.85
MMP28-203ENST00000612672 AURKBQ96GD4 344 aaPredicted RBP20.33■□□□□ 0.85
MMP28-203ENST00000612672 SNX18Q96RF0 628 aa20.33■□□□□ 0.85
MMP28-203ENST00000612672 ZDHHC2Q9UIJ5 367 aa20.33■□□□□ 0.85
MMP28-203ENST00000612672 CMYA5Q8N3K9 4069 aa20.32■□□□□ 0.84
MMP28-203ENST00000612672 AKR7A3O95154 331 aa20.32■□□□□ 0.84
MMP28-203ENST00000612672 CELA3BP08861 270 aa20.32■□□□□ 0.84
MMP28-203ENST00000612672 DAOP14920 347 aa20.32■□□□□ 0.84
MMP28-203ENST00000612672 APEX1P27695 318 aaKnown RBP20.32■□□□□ 0.84
MMP28-203ENST00000612672 TACR3P29371 465 aa20.32■□□□□ 0.84
MMP28-203ENST00000612672 IDH3GP51553 393 aaPredicted RBP20.32■□□□□ 0.84
MMP28-203ENST00000612672 P2RY4P51582 365 aa20.32■□□□□ 0.84
MMP28-203ENST00000612672 HGFACQ04756 655 aa20.32■□□□□ 0.84
MMP28-203ENST00000612672 OTUD3Q5T2D3 398 aaPredicted RBP20.32■□□□□ 0.84
MMP28-203ENST00000612672 BHLHB9Q6PI77 547 aa20.32■□□□□ 0.84
MMP28-203ENST00000612672 PAQR6Q6TCH4 344 aa20.32■□□□□ 0.84
MMP28-203ENST00000612672 ANKRD46Q86W74 232 aa20.32■□□□□ 0.84
MMP28-203ENST00000612672 ARFGAP2Q8N6H7 521 aa20.32■□□□□ 0.84
MMP28-203ENST00000612672 ALKBH3Q96Q83 286 aaPredicted RBP20.32■□□□□ 0.84
MMP28-203ENST00000612672 KATNB1Q9BVA0 655 aa20.32■□□□□ 0.84
MMP28-203ENST00000612672 CRNNQ9UBG3 495 aaPredicted RBP20.32■□□□□ 0.84
MMP28-203ENST00000612672 PCDHGB4Q9UN71 923 aa20.32■□□□□ 0.84
MMP28-203ENST00000612672 LYNX1G3V0Z9 82 aa20.31■□□□□ 0.84
MMP28-203ENST00000612672 ZNF208O43345 1280 aa20.31■□□□□ 0.84
MMP28-203ENST00000612672 KCNAB3O43448 404 aa20.31■□□□□ 0.84
MMP28-203ENST00000612672 SPRY1O43609 319 aaPredicted RBP20.31■□□□□ 0.84
MMP28-203ENST00000612672 EIF1BO60739 113 aaKnown RBP20.31■□□□□ 0.84
MMP28-203ENST00000612672 GUSBP08236 651 aa20.31■□□□□ 0.84
MMP28-203ENST00000612672 LYNX1P0DP58 116 aa20.31■□□□□ 0.84
MMP28-203ENST00000612672 SRP14P37108 136 aaKnown RBP20.31■□□□□ 0.84
MMP28-203ENST00000612672 SELENOPP49908 381 aa20.31■□□□□ 0.84
MMP28-203ENST00000612672 CDH15P55291 814 aa20.31■□□□□ 0.84
MMP28-203ENST00000612672 FAM174BQ3ZCQ3 159 aa20.31■□□□□ 0.84
MMP28-203ENST00000612672 ANKRD16Q6P6B7 361 aa20.31■□□□□ 0.84
MMP28-203ENST00000612672 C12orf54Q6X4T0 127 aa20.31■□□□□ 0.84
MMP28-203ENST00000612672 RINLQ6ZS11 566 aa20.31■□□□□ 0.84
MMP28-203ENST00000612672 AAED1Q7RTV5 226 aa20.31■□□□□ 0.84
MMP28-203ENST00000612672 MNS1Q8NEH6 495 aa20.31■□□□□ 0.84
MMP28-203ENST00000612672 OR4A15Q8NGL6 344 aa20.31■□□□□ 0.84
MMP28-203ENST00000612672 PRPF18Q99633 342 aaKnown RBP20.31■□□□□ 0.84
MMP28-203ENST00000612672 NAA11Q9BSU3 229 aaPredicted RBP20.31■□□□□ 0.84
MMP28-203ENST00000612672 EXD2Q9NVH0 621 aa20.31■□□□□ 0.84
MMP28-203ENST00000612672 SLC17A7Q9P2U7 560 aa20.31■□□□□ 0.84
MMP28-203ENST00000612672 TMEM129A0AVI4 362 aa20.3■□□□□ 0.84
MMP28-203ENST00000612672 PDE5AO76074 875 aa20.3■□□□□ 0.84
MMP28-203ENST00000612672 IGLV1-44P01699 117 aa20.3■□□□□ 0.84
MMP28-203ENST00000612672 POLR2HP52434 150 aaKnown RBP20.3■□□□□ 0.84
MMP28-203ENST00000612672 CHN2P52757 468 aa20.3■□□□□ 0.84
MMP28-203ENST00000612672 CLDN8P56748 225 aa20.3■□□□□ 0.84
MMP28-203ENST00000612672 CEACAM7Q14002 265 aa20.3■□□□□ 0.84
MMP28-203ENST00000612672 CCNIQ14094 377 aa20.3■□□□□ 0.84
MMP28-203ENST00000612672 SAXO2Q658L1 398 aa20.3■□□□□ 0.84
MMP28-203ENST00000612672 LINC01356Q8N9X3 169 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms