RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 KIAA1549LQ6ZVL6 1849 aa12.93□□□□□ -0.34
COL6A1-207ENST00000612273 GPR171O14626 319 aa12.93□□□□□ -0.34
COL6A1-207ENST00000612273 FMO6PO60774 539 aa12.93□□□□□ -0.34
COL6A1-207ENST00000612273 GPANK1O95872 356 aa12.93□□□□□ -0.34
COL6A1-207ENST00000612273 OR8G3PP0DMU2 310 aa12.93□□□□□ -0.34
COL6A1-207ENST00000612273 CENPAP49450 140 aa12.93□□□□□ -0.34
COL6A1-207ENST00000612273 GBX2P52951 348 aaPredicted RBP12.93□□□□□ -0.34
COL6A1-207ENST00000612273 ADPRHP54922 357 aa12.93□□□□□ -0.34
COL6A1-207ENST00000612273 RPS15P62841 145 aaKnown RBP12.93□□□□□ -0.34
COL6A1-207ENST00000612273 SIRPAP78324 504 aa12.93□□□□□ -0.34
COL6A1-207ENST00000612273 GARNL3Q5VVW2 1013 aa12.93□□□□□ -0.34
COL6A1-207ENST00000612273 KIRREL2Q6UWL6 708 aa12.93□□□□□ -0.34
COL6A1-207ENST00000612273 RTL4Q6ZR62 310 aa12.93□□□□□ -0.34
COL6A1-207ENST00000612273 ZNF767PQ75MW2 155 aa12.93□□□□□ -0.34
COL6A1-207ENST00000612273 GPALPP1Q8IXQ4 340 aa12.93□□□□□ -0.34
COL6A1-207ENST00000612273 C1orf216Q8TAB5 229 aa12.93□□□□□ -0.34
COL6A1-207ENST00000612273 AHCYL2Q96HN2 611 aaKnown RBP12.93□□□□□ -0.34
COL6A1-207ENST00000612273 PHF11Q9UIL8 331 aa12.93□□□□□ -0.34
COL6A1-207ENST00000612273 OR10H1Q9Y4A9 318 aa12.93□□□□□ -0.34
COL6A1-207ENST00000612273 CARNS1A5YM72 827 aa12.93□□□□□ -0.34
COL6A1-207ENST00000612273 SIX6O95475 246 aa12.93□□□□□ -0.34
COL6A1-207ENST00000612273 F13BP05160 661 aa12.93□□□□□ -0.34
COL6A1-207ENST00000612273 UCHL1P09936 223 aa12.93□□□□□ -0.34
COL6A1-207ENST00000612273 ADH7P40394 386 aa12.93□□□□□ -0.34
COL6A1-207ENST00000612273 TSPAN5P62079 268 aa12.93□□□□□ -0.34
COL6A1-207ENST00000612273 GPM6BQ13491 265 aa12.93□□□□□ -0.34
COL6A1-207ENST00000612273 PON3Q15166 354 aa12.93□□□□□ -0.34
COL6A1-207ENST00000612273 LGALSLQ3ZCW2 172 aaPredicted RBP12.93□□□□□ -0.34
COL6A1-207ENST00000612273 PRAMEF8Q5VWM4 474 aa12.93□□□□□ -0.34
COL6A1-207ENST00000612273 PRAMEF7Q5VXH5 474 aa12.93□□□□□ -0.34
COL6A1-207ENST00000612273 ZNF776Q68DI1 518 aaPredicted RBP12.93□□□□□ -0.34
COL6A1-207ENST00000612273 LRRC20Q8TCA0 184 aa12.93□□□□□ -0.34
COL6A1-207ENST00000612273 ULBP3Q9BZM4 244 aa12.93□□□□□ -0.34
COL6A1-207ENST00000612273 MCCC2Q9HCC0 563 aa12.93□□□□□ -0.34
COL6A1-207ENST00000612273 ACTR10Q9NZ32 417 aa12.93□□□□□ -0.34
COL6A1-207ENST00000612273 ZNF69Q9UC07 566 aa12.93□□□□□ -0.34
COL6A1-207ENST00000612273 C19orf53Q9UNZ5 99 aaPredicted RBP12.93□□□□□ -0.34
COL6A1-207ENST00000612273 SLC22A7Q9Y694 548 aa12.93□□□□□ -0.34
COL6A1-207ENST00000612273 A0A0A6YYC8 382 aaPredicted RBP12.92□□□□□ -0.34
COL6A1-207ENST00000612273 I3L1I5 382 aaPredicted RBP12.92□□□□□ -0.34
COL6A1-207ENST00000612273 MAS1P04201 325 aa12.92□□□□□ -0.34
COL6A1-207ENST00000612273 ALDOBP05062 364 aa12.92□□□□□ -0.34
COL6A1-207ENST00000612273 CELA2BP08218 269 aaPredicted RBP12.92□□□□□ -0.34
COL6A1-207ENST00000612273 ANXA7P20073 488 aaKnown RBP12.92□□□□□ -0.34
COL6A1-207ENST00000612273 ACSM1Q08AH1 577 aa12.92□□□□□ -0.34
COL6A1-207ENST00000612273 EXOSC2Q13868 293 aaKnown RBP12.92□□□□□ -0.34
COL6A1-207ENST00000612273 YOD1Q5VVQ6 348 aaPredicted RBP12.92□□□□□ -0.34
COL6A1-207ENST00000612273 SIGIRRQ6IA17 410 aa12.92□□□□□ -0.34
COL6A1-207ENST00000612273 SCMH1Q96GD3 660 aa12.92□□□□□ -0.34
COL6A1-207ENST00000612273 SERINC2Q96SA4 455 aa12.92□□□□□ -0.34
COL6A1-207ENST00000612273 KIR3DX1Q9H7L2 352 aa12.92□□□□□ -0.34
COL6A1-207ENST00000612273 TRPV4Q9HBA0 871 aa12.92□□□□□ -0.34
COL6A1-207ENST00000612273 LRIT1Q9P2V4 623 aa12.92□□□□□ -0.34
COL6A1-207ENST00000612273 IKZF2Q9UKS7 526 aa12.92□□□□□ -0.34
COL6A1-207ENST00000612273 IFNGP01579 166 aa12.92□□□□□ -0.34
COL6A1-207ENST00000612273 IGKV1D-16P01601 117 aa12.92□□□□□ -0.34
COL6A1-207ENST00000612273 TMIGD3P0DMS9 266 aaPredicted RBP12.92□□□□□ -0.34
COL6A1-207ENST00000612273 PRMT2P55345 433 aa12.92□□□□□ -0.34
COL6A1-207ENST00000612273 NRG3P56975 720 aa12.92□□□□□ -0.34
COL6A1-207ENST00000612273 SNTA1Q13424 505 aa12.92□□□□□ -0.34
COL6A1-207ENST00000612273 ESCO2Q56NI9 601 aa12.92□□□□□ -0.34
COL6A1-207ENST00000612273 WDR45BQ5MNZ6 344 aa12.92□□□□□ -0.34
COL6A1-207ENST00000612273 TMEM240Q5SV17 173 aa12.92□□□□□ -0.34
COL6A1-207ENST00000612273 DMKNQ6E0U4 476 aaPredicted RBP12.92□□□□□ -0.34
COL6A1-207ENST00000612273 APOOLQ6UXV4 268 aa12.92□□□□□ -0.34
COL6A1-207ENST00000612273 CDH24Q86UP0 819 aa12.92□□□□□ -0.34
COL6A1-207ENST00000612273 SLC35F2Q8IXU6 374 aa12.92□□□□□ -0.34
COL6A1-207ENST00000612273 CDRT4Q8N9R6 151 aa12.92□□□□□ -0.34
COL6A1-207ENST00000612273 OR52B4Q8NGK2 314 aa12.92□□□□□ -0.34
COL6A1-207ENST00000612273 OR4C3Q8NH37 302 aa12.92□□□□□ -0.34
COL6A1-207ENST00000612273 LMAN2LQ9H0V9 348 aa12.92□□□□□ -0.34
COL6A1-207ENST00000612273 C2orf42Q9NWW7 574 aa12.92□□□□□ -0.34
COL6A1-207ENST00000612273 MYEF2Q9P2K5 600 aaKnown RBP12.92□□□□□ -0.34
COL6A1-207ENST00000612273 MPC2O95563 127 aa12.91□□□□□ -0.34
COL6A1-207ENST00000612273 SLC6A6P31641 620 aa12.91□□□□□ -0.34
COL6A1-207ENST00000612273 DCTDP32321 178 aa12.91□□□□□ -0.34
COL6A1-207ENST00000612273 RAD52P43351 418 aa12.91□□□□□ -0.34
COL6A1-207ENST00000612273 GSG1Q2KHT4 349 aa12.91□□□□□ -0.34
COL6A1-207ENST00000612273 TMEM196Q5HYL7 178 aa12.91□□□□□ -0.34
COL6A1-207ENST00000612273 FCRL6Q6DN72 434 aa12.91□□□□□ -0.34
COL6A1-207ENST00000612273 Q96M85 177 aa12.91□□□□□ -0.34
COL6A1-207ENST00000612273 ELF4Q99607 663 aaPredicted RBP12.91□□□□□ -0.34
COL6A1-207ENST00000612273 KCNK15Q9H427 330 aa12.91□□□□□ -0.34
COL6A1-207ENST00000612273 GLTPQ9NZD2 209 aa12.91□□□□□ -0.34
COL6A1-207ENST00000612273 HEATR5AQ86XA9 2040 aa12.91□□□□□ -0.34
COL6A1-207ENST00000612273 OR6C68A6NDL8 312 aa12.91□□□□□ -0.34
COL6A1-207ENST00000612273 C17orf51A8MQB3 221 aa12.91□□□□□ -0.34
COL6A1-207ENST00000612273 GPR75O95800 540 aa12.91□□□□□ -0.34
COL6A1-207ENST00000612273 IFNA16P05015 189 aa12.91□□□□□ -0.34
COL6A1-207ENST00000612273 AP2S1P53680 142 aaPredicted RBP12.91□□□□□ -0.34
COL6A1-207ENST00000612273 PXDC1Q5TGL8 231 aa12.91□□□□□ -0.34
COL6A1-207ENST00000612273 CNN2Q99439 309 aaKnown RBP12.91□□□□□ -0.34
COL6A1-207ENST00000612273 ZFYVE21Q9BQ24 234 aa12.91□□□□□ -0.34
COL6A1-207ENST00000612273 C20orf85Q9H1P6 137 aa12.91□□□□□ -0.34
COL6A1-207ENST00000612273 LIN7BQ9HAP6 207 aa12.91□□□□□ -0.34
COL6A1-207ENST00000612273 MPDZO75970 2070 aa12.91□□□□□ -0.34
COL6A1-207ENST00000612273 TMEM72A0PK05 275 aa12.91□□□□□ -0.34
COL6A1-207ENST00000612273 NUPL2O15504 423 aaKnown RBP12.91□□□□□ -0.34
COL6A1-207ENST00000612273 TRIM3O75382 744 aaPredicted RBP12.91□□□□□ -0.34
COL6A1-207ENST00000612273 UBL3O95164 117 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms