RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 KRT33AO76009 404 aa10.95□□□□□ -0.66
CBWD3-208ENST00000612050 VAMP5O95183 116 aa10.95□□□□□ -0.66
CBWD3-208ENST00000612050 ADAP00813 363 aa10.95□□□□□ -0.66
CBWD3-208ENST00000612050 IFNA14P01570 189 aa10.95□□□□□ -0.66
CBWD3-208ENST00000612050 HOXB1P14653 301 aaPredicted RBP10.95□□□□□ -0.66
CBWD3-208ENST00000612050 ACAA2P42765 397 aaKnown RBP10.95□□□□□ -0.66
CBWD3-208ENST00000612050 MTPNP58546 118 aa10.95□□□□□ -0.66
CBWD3-208ENST00000612050 CEACAM7Q14002 265 aa10.95□□□□□ -0.66
CBWD3-208ENST00000612050 ALG10BQ5I7T1 473 aa10.95□□□□□ -0.66
CBWD3-208ENST00000612050 ALKBH2Q6NS38 261 aa10.95□□□□□ -0.66
CBWD3-208ENST00000612050 ULK3Q6PHR2 472 aa10.95□□□□□ -0.66
CBWD3-208ENST00000612050 CASP12Q6UXS9 341 aa10.95□□□□□ -0.66
CBWD3-208ENST00000612050 DLEU7Q6UYE1 221 aa10.95□□□□□ -0.66
CBWD3-208ENST00000612050 BHLHA15Q7RTS1 189 aaPredicted RBP10.95□□□□□ -0.66
CBWD3-208ENST00000612050 MSRB3Q8IXL7 192 aa10.95□□□□□ -0.66
CBWD3-208ENST00000612050 CREBBPQ92793 2442 aa10.95□□□□□ -0.66
CBWD3-208ENST00000612050 SLC38A4Q969I6 547 aa10.95□□□□□ -0.66
CBWD3-208ENST00000612050 DNAJA3Q96EY1 480 aa10.95□□□□□ -0.66
CBWD3-208ENST00000612050 SLC47A1Q96FL8 570 aa10.95□□□□□ -0.66
CBWD3-208ENST00000612050 ZNF300Q96RE9 604 aaPredicted RBP10.95□□□□□ -0.66
CBWD3-208ENST00000612050 EPYCQ99645 322 aa10.95□□□□□ -0.66
CBWD3-208ENST00000612050 SF3B5Q9BWJ5 86 aaKnown RBP10.95□□□□□ -0.66
CBWD3-208ENST00000612050 ESRP2Q9H6T0 727 aaKnown RBP10.95□□□□□ -0.66
CBWD3-208ENST00000612050 SLC52A3Q9NQ40 469 aa10.95□□□□□ -0.66
CBWD3-208ENST00000612050 ASB6Q9NWX5 421 aa10.95□□□□□ -0.66
CBWD3-208ENST00000612050 AP3M1Q9Y2T2 418 aa10.95□□□□□ -0.66
CBWD3-208ENST00000612050 ITPR2Q14571 2701 aa10.95□□□□□ -0.66
CBWD3-208ENST00000612050 CCT8L1PA6NM43 557 aa10.94□□□□□ -0.66
CBWD3-208ENST00000612050 ADAM11O75078 769 aa10.94□□□□□ -0.66
CBWD3-208ENST00000612050 CCKARP32238 428 aa10.94□□□□□ -0.66
CBWD3-208ENST00000612050 SLC16A1P53985 500 aa10.94□□□□□ -0.66
CBWD3-208ENST00000612050 IST1P53990 364 aa10.94□□□□□ -0.66
CBWD3-208ENST00000612050 IL1RL1Q01638 556 aa10.94□□□□□ -0.66
CBWD3-208ENST00000612050 TGFBR3Q03167 851 aa10.94□□□□□ -0.66
CBWD3-208ENST00000612050 SF3A3Q12874 501 aaKnown RBP eCLIP10.94□□□□□ -0.66
CBWD3-208ENST00000612050 KLF10Q13118 480 aa10.94□□□□□ -0.66
CBWD3-208ENST00000612050 MFSD13AQ14CX5 517 aa10.94□□□□□ -0.66
CBWD3-208ENST00000612050 STK11Q15831 433 aa10.94□□□□□ -0.66
CBWD3-208ENST00000612050 C1orf140Q5VVS0 124 aa10.94□□□□□ -0.66
CBWD3-208ENST00000612050 FBXW9Q5XUX1 488 aa10.94□□□□□ -0.66
CBWD3-208ENST00000612050 FAM91A1Q658Y4 838 aa10.94□□□□□ -0.66
CBWD3-208ENST00000612050 ERICH5Q6P6B1 374 aa10.94□□□□□ -0.66
CBWD3-208ENST00000612050 GPAT4Q86UL3 456 aa10.94□□□□□ -0.66
CBWD3-208ENST00000612050 P2RY8Q86VZ1 359 aa10.94□□□□□ -0.66
CBWD3-208ENST00000612050 LURAP1LQ8IV03 231 aa10.94□□□□□ -0.66
CBWD3-208ENST00000612050 GABRG1Q8N1C3 465 aa10.94□□□□□ -0.66
CBWD3-208ENST00000612050 LSMEM1Q8N8F7 131 aa10.94□□□□□ -0.66
CBWD3-208ENST00000612050 OR8J3Q8NGG0 315 aa10.94□□□□□ -0.66
CBWD3-208ENST00000612050 PIGTQ969N2 578 aa10.94□□□□□ -0.66
CBWD3-208ENST00000612050 S100PBPQ96BU1 408 aa10.94□□□□□ -0.66
CBWD3-208ENST00000612050 ZNF775Q96BV0 537 aaPredicted RBP10.94□□□□□ -0.66
CBWD3-208ENST00000612050 ZNF524Q96C55 264 aa10.94□□□□□ -0.66
CBWD3-208ENST00000612050 FOXC2Q99958 501 aa10.94□□□□□ -0.66
CBWD3-208ENST00000612050 PIF1Q9H611 641 aa10.94□□□□□ -0.66
CBWD3-208ENST00000612050 CCM2LQ9NUG4 571 aaPredicted RBP10.94□□□□□ -0.66
CBWD3-208ENST00000612050 PLEKHA6Q9Y2H5 1048 aa10.94□□□□□ -0.66
CBWD3-208ENST00000612050 ANKHD1Q8IWZ3 2542 aaKnown RBP10.94□□□□□ -0.66
CBWD3-208ENST00000612050 OR6C65A6NJZ3 312 aa10.93□□□□□ -0.66
CBWD3-208ENST00000612050 LIPT2A6NK58 231 aa10.93□□□□□ -0.66
CBWD3-208ENST00000612050 AKAP8O43823 692 aaKnown RBP10.93□□□□□ -0.66
CBWD3-208ENST00000612050 C8BP07358 591 aa10.93□□□□□ -0.66
CBWD3-208ENST00000612050 PRG2P13727 222 aa10.93□□□□□ -0.66
CBWD3-208ENST00000612050 GGT1P19440 569 aa10.93□□□□□ -0.66
CBWD3-208ENST00000612050 PLAURQ03405 335 aa10.93□□□□□ -0.66
CBWD3-208ENST00000612050 OR7E24Q6IFN5 339 aa10.93□□□□□ -0.66
CBWD3-208ENST00000612050 KLHL24Q6TFL4 600 aa10.93□□□□□ -0.66
CBWD3-208ENST00000612050 C20orf204Q6ZNR8 217 aa10.93□□□□□ -0.66
CBWD3-208ENST00000612050 NET1Q7Z628 596 aaPredicted RBP10.93□□□□□ -0.66
CBWD3-208ENST00000612050 ARPINQ7Z6K5 226 aa10.93□□□□□ -0.66
CBWD3-208ENST00000612050 ATG4DQ86TL0 474 aaPredicted RBP10.93□□□□□ -0.66
CBWD3-208ENST00000612050 CCDC103Q8IW40 242 aa10.93□□□□□ -0.66
CBWD3-208ENST00000612050 OR10A6Q8NH74 314 aa10.93□□□□□ -0.66
CBWD3-208ENST00000612050 MFSD8Q8NHS3 518 aa10.93□□□□□ -0.66
CBWD3-208ENST00000612050 NRGNQ92686 78 aa10.93□□□□□ -0.66
CBWD3-208ENST00000612050 PROX1Q92786 737 aa10.93□□□□□ -0.66
CBWD3-208ENST00000612050 C3orf49Q96BT1 292 aa10.93□□□□□ -0.66
CBWD3-208ENST00000612050 SLC25A36Q96CQ1 311 aa10.93□□□□□ -0.66
CBWD3-208ENST00000612050 LRRC58Q96CX6 371 aa10.93□□□□□ -0.66
CBWD3-208ENST00000612050 ALPK1Q96QP1 1244 aa10.93□□□□□ -0.66
CBWD3-208ENST00000612050 IKZF5Q9H5V7 419 aa10.93□□□□□ -0.66
CBWD3-208ENST00000612050 KAT8Q9H7Z6 458 aaKnown RBP10.93□□□□□ -0.66
CBWD3-208ENST00000612050 UBTD1Q9HAC8 227 aa10.93□□□□□ -0.66
CBWD3-208ENST00000612050 SAR1AQ9NR31 198 aa10.93□□□□□ -0.66
CBWD3-208ENST00000612050 RASD1Q9Y272 281 aa10.93□□□□□ -0.66
CBWD3-208ENST00000612050 APCP25054 2843 aa10.93□□□□□ -0.66
CBWD3-208ENST00000612050 LOC100653049A0A140TA62 436 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.92□□□□□ -0.66
CBWD3-208ENST00000612050 ZC3H12DA2A288 527 aaKnown RBP10.92□□□□□ -0.66
CBWD3-208ENST00000612050 AQP7P3A6NL99 342 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 ZNF716A6NP11 495 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 NDUFAB1O14561 156 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 FRS3O43559 492 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 GCM2O75603 506 aaPredicted RBP10.92□□□□□ -0.66
CBWD3-208ENST00000612050 LYZL6O75951 148 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 KRT34O76011 436 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 AKR7A3O95154 331 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 CD3EP07766 207 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 IMPDH2P12268 514 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 IFNA8P32881 189 aa10.92□□□□□ -0.66
CBWD3-208ENST00000612050 PCGF2P35227 344 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms