RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 PIK3IP1Q96FE7 263 aa12.79□□□□□ -0.36
TUBE1-208ENST00000604743 TAPBPLQ9BX59 468 aa12.79□□□□□ -0.36
TUBE1-208ENST00000604743 POTEKPQ9BYX7 375 aa12.79□□□□□ -0.36
TUBE1-208ENST00000604743 ACTR6Q9GZN1 396 aa12.79□□□□□ -0.36
TUBE1-208ENST00000604743 FAM107BQ9H098 131 aa12.79□□□□□ -0.36
TUBE1-208ENST00000604743 ADPRHL2Q9NX46 363 aa12.79□□□□□ -0.36
TUBE1-208ENST00000604743 NOSIPQ9Y314 301 aaKnown RBP12.79□□□□□ -0.36
TUBE1-208ENST00000604743 ZNF716A6NP11 495 aa12.78□□□□□ -0.36
TUBE1-208ENST00000604743 BBIP1A8MTZ0 92 aa12.78□□□□□ -0.36
TUBE1-208ENST00000604743 DNPH1O43598 174 aa12.78□□□□□ -0.36
TUBE1-208ENST00000604743 EIF1BO60739 113 aaKnown RBP12.78□□□□□ -0.36
TUBE1-208ENST00000604743 GCM2O75603 506 aaPredicted RBP12.78□□□□□ -0.36
TUBE1-208ENST00000604743 MFN2O95140 757 aa12.78□□□□□ -0.36
TUBE1-208ENST00000604743 IGHV3-9P01782 118 aa12.78□□□□□ -0.36
TUBE1-208ENST00000604743 GPIP06744 558 aa12.78□□□□□ -0.36
TUBE1-208ENST00000604743 HTR2AP28223 471 aa12.78□□□□□ -0.36
TUBE1-208ENST00000604743 OR3A2P47893 321 aa12.78□□□□□ -0.36
TUBE1-208ENST00000604743 SEC24CP53992 1094 aa12.78□□□□□ -0.36
TUBE1-208ENST00000604743 OTUD3Q5T2D3 398 aaPredicted RBP12.78□□□□□ -0.36
TUBE1-208ENST00000604743 C1orf140Q5VVS0 124 aa12.78□□□□□ -0.36
TUBE1-208ENST00000604743 ATG4DQ86TL0 474 aaPredicted RBP12.78□□□□□ -0.36
TUBE1-208ENST00000604743 WFDC8Q8IUA0 241 aa12.78□□□□□ -0.36
TUBE1-208ENST00000604743 LURAP1LQ8IV03 231 aa12.78□□□□□ -0.36
TUBE1-208ENST00000604743 GABRG1Q8N1C3 465 aa12.78□□□□□ -0.36
TUBE1-208ENST00000604743 UBE2J2Q8N2K1 259 aa12.78□□□□□ -0.36
TUBE1-208ENST00000604743 TMEM99Q8N816 258 aa12.78□□□□□ -0.36
TUBE1-208ENST00000604743 PCYOX1LQ8NBM8 494 aa12.78□□□□□ -0.36
TUBE1-208ENST00000604743 SLC26A7Q8TE54 656 aa12.78□□□□□ -0.36
TUBE1-208ENST00000604743 SLC25A36Q96CQ1 311 aa12.78□□□□□ -0.36
TUBE1-208ENST00000604743 SH3GL1Q99961 368 aa12.78□□□□□ -0.36
TUBE1-208ENST00000604743 ELAC2Q9BQ52 826 aaKnown RBP12.78□□□□□ -0.36
TUBE1-208ENST00000604743 ECSITQ9BQ95 431 aa12.78□□□□□ -0.36
TUBE1-208ENST00000604743 WFDC6Q9BQY6 131 aa12.78□□□□□ -0.36
TUBE1-208ENST00000604743 GID8Q9NWU2 228 aa12.78□□□□□ -0.36
TUBE1-208ENST00000604743 PLEKHA6Q9Y2H5 1048 aa12.78□□□□□ -0.36
TUBE1-208ENST00000604743 GPR52Q9Y2T5 361 aa12.78□□□□□ -0.36
TUBE1-208ENST00000604743 OTOGQ6ZRI0 2925 aa12.77□□□□□ -0.36
TUBE1-208ENST00000604743 A0A1B0GWA3 101 aa12.77□□□□□ -0.37
TUBE1-208ENST00000604743 LIPT2A6NK58 231 aa12.77□□□□□ -0.37
TUBE1-208ENST00000604743 FXYD1O00168 92 aa12.77□□□□□ -0.37
TUBE1-208ENST00000604743 SIAH2O43255 324 aa12.77□□□□□ -0.37
TUBE1-208ENST00000604743 MRPL33O75394 65 aaKnown RBP12.77□□□□□ -0.37
TUBE1-208ENST00000604743 THBDP07204 575 aa12.77□□□□□ -0.37
TUBE1-208ENST00000604743 PSMB1P20618 241 aaKnown RBP12.77□□□□□ -0.37
TUBE1-208ENST00000604743 CRYGSP22914 178 aa12.77□□□□□ -0.37
TUBE1-208ENST00000604743 IL32P24001 234 aa12.77□□□□□ -0.37
TUBE1-208ENST00000604743 ADSLP30566 484 aaPredicted RBP12.77□□□□□ -0.37
TUBE1-208ENST00000604743 PCGF2P35227 344 aa12.77□□□□□ -0.37
TUBE1-208ENST00000604743 RPS5P46782 204 aaKnown RBP12.77□□□□□ -0.37
TUBE1-208ENST00000604743 GYS2P54840 703 aa12.77□□□□□ -0.37
TUBE1-208ENST00000604743 PCBP3P57721 371 aaKnown RBP12.77□□□□□ -0.37
TUBE1-208ENST00000604743 H3F3AP84243 136 aa12.77□□□□□ -0.37
TUBE1-208ENST00000604743 PDK3Q15120 406 aa12.77□□□□□ -0.37
TUBE1-208ENST00000604743 COQ5Q5HYK3 327 aa12.77□□□□□ -0.37
TUBE1-208ENST00000604743 SFRP5Q5T4F7 317 aa12.77□□□□□ -0.37
TUBE1-208ENST00000604743 NET1Q7Z628 596 aaPredicted RBP12.77□□□□□ -0.37
TUBE1-208ENST00000604743 GPAT4Q86UL3 456 aa12.77□□□□□ -0.37
TUBE1-208ENST00000604743 BHLHE22Q8NFJ8 381 aaPredicted RBP12.77□□□□□ -0.37
TUBE1-208ENST00000604743 STEAP2Q8NFT2 490 aa12.77□□□□□ -0.37
TUBE1-208ENST00000604743 KISS1RQ969F8 398 aaPredicted RBP12.77□□□□□ -0.37
TUBE1-208ENST00000604743 SLC35B4Q969S0 331 aa12.77□□□□□ -0.37
TUBE1-208ENST00000604743 S100PBPQ96BU1 408 aa12.77□□□□□ -0.37
TUBE1-208ENST00000604743 RCN3Q96D15 328 aa12.77□□□□□ -0.37
TUBE1-208ENST00000604743 TRIM2Q9C040 744 aa12.77□□□□□ -0.37
TUBE1-208ENST00000604743 TMEM27Q9HBJ8 222 aa12.77□□□□□ -0.37
TUBE1-208ENST00000604743 SELENONQ9NZV5 590 aa12.77□□□□□ -0.37
TUBE1-208ENST00000604743 ST6GALNAC2Q9UJ37 374 aa12.77□□□□□ -0.37
TUBE1-208ENST00000604743 PRDM4Q9UKN5 801 aa12.77□□□□□ -0.37
TUBE1-208ENST00000604743 USP22Q9UPT9 525 aa12.77□□□□□ -0.37
TUBE1-208ENST00000604743 IGKV3D-15A0A087WSY6 115 aa12.76□□□□□ -0.37
TUBE1-208ENST00000604743 A0A1W2PPR1 153 aa12.76□□□□□ -0.37
TUBE1-208ENST00000604743 DEFB108AA8MXU0 73 aa12.76□□□□□ -0.37
TUBE1-208ENST00000604743 TMEM229AB2RXF0 380 aa12.76□□□□□ -0.37
TUBE1-208ENST00000604743 M0R3H8 397 aa12.76□□□□□ -0.37
TUBE1-208ENST00000604743 GPR171O14626 319 aa12.76□□□□□ -0.37
TUBE1-208ENST00000604743 LYZL6O75951 148 aa12.76□□□□□ -0.37
TUBE1-208ENST00000604743 GOSR1O95249 250 aa12.76□□□□□ -0.37
TUBE1-208ENST00000604743 AHSA1O95433 338 aa12.76□□□□□ -0.37
TUBE1-208ENST00000604743 PPP3CBP16298 524 aa12.76□□□□□ -0.37
TUBE1-208ENST00000604743 PTNP21246 168 aa12.76□□□□□ -0.37
TUBE1-208ENST00000604743 GZMMP51124 257 aa12.76□□□□□ -0.37
TUBE1-208ENST00000604743 IST1P53990 364 aa12.76□□□□□ -0.37
TUBE1-208ENST00000604743 ITGADQ13349 1161 aa12.76□□□□□ -0.37
TUBE1-208ENST00000604743 OR1Q1Q15612 314 aa12.76□□□□□ -0.37
TUBE1-208ENST00000604743 DUSP7Q16829 419 aa12.76□□□□□ -0.37
TUBE1-208ENST00000604743 VMACQ2NL98 169 aa12.76□□□□□ -0.37
TUBE1-208ENST00000604743 ALG10BQ5I7T1 473 aa12.76□□□□□ -0.37
TUBE1-208ENST00000604743 INTS11Q5TA45 600 aaKnown RBP12.76□□□□□ -0.37
TUBE1-208ENST00000604743 TMEM225Q6GV28 225 aa12.76□□□□□ -0.37
TUBE1-208ENST00000604743 PAQR6Q6TCH4 344 aa12.76□□□□□ -0.37
TUBE1-208ENST00000604743 CASP12Q6UXS9 341 aa12.76□□□□□ -0.37
TUBE1-208ENST00000604743 BHLHA15Q7RTS1 189 aaPredicted RBP12.76□□□□□ -0.37
TUBE1-208ENST00000604743 SPATA21Q7Z572 469 aa12.76□□□□□ -0.37
TUBE1-208ENST00000604743 PATL1Q86TB9 770 aaKnown RBP12.76□□□□□ -0.37
TUBE1-208ENST00000604743 RANBP3LQ86VV4 465 aaPredicted RBP12.76□□□□□ -0.37
TUBE1-208ENST00000604743 P3H2Q8IVL5 708 aa12.76□□□□□ -0.37
TUBE1-208ENST00000604743 SLC30A8Q8IWU4 369 aa12.76□□□□□ -0.37
TUBE1-208ENST00000604743 OR8J3Q8NGG0 315 aa12.76□□□□□ -0.37
TUBE1-208ENST00000604743 VANGL1Q8TAA9 524 aaPredicted RBP12.76□□□□□ -0.37
TUBE1-208ENST00000604743 STK35Q8TDR2 534 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms