RNA–Protein interactions for RNA: ENST00000602086.5

ZNF548-212, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-212ENST00000602086 MFSD13AQ14CX5 517 aa13.03□□□□□ -0.32
ZNF548-212ENST00000602086 PGGHGQ32M88 737 aa13.03□□□□□ -0.32
ZNF548-212ENST00000602086 TMEM236Q5W0B7 351 aa13.03□□□□□ -0.32
ZNF548-212ENST00000602086 ACSM5Q6NUN0 579 aa13.03□□□□□ -0.32
ZNF548-212ENST00000602086 VASH2Q86V25 355 aa13.03□□□□□ -0.32
ZNF548-212ENST00000602086 P3H2Q8IVL5 708 aa13.03□□□□□ -0.32
ZNF548-212ENST00000602086 PSD4Q8NDX1 1056 aa13.03□□□□□ -0.32
ZNF548-212ENST00000602086 OR1J4Q8NGS1 313 aa13.03□□□□□ -0.32
ZNF548-212ENST00000602086 CNIH3Q8TBE1 160 aa13.03□□□□□ -0.32
ZNF548-212ENST00000602086 FGF11Q92914 225 aa13.03□□□□□ -0.32
ZNF548-212ENST00000602086 SAMD8Q96LT4 415 aa13.03□□□□□ -0.32
ZNF548-212ENST00000602086 UTP23Q9BRU9 249 aaKnown RBP13.03□□□□□ -0.32
ZNF548-212ENST00000602086 NDEL1Q9GZM8 345 aa13.03□□□□□ -0.32
ZNF548-212ENST00000602086 UBQLN3Q9H347 655 aa13.03□□□□□ -0.32
ZNF548-212ENST00000602086 FN3KQ9H479 309 aa13.03□□□□□ -0.32
ZNF548-212ENST00000602086 DUSP21Q9H596 190 aa13.03□□□□□ -0.32
ZNF548-212ENST00000602086 CCNB1IP1Q9NPC3 277 aa13.03□□□□□ -0.32
ZNF548-212ENST00000602086 SERINC1Q9NRX5 453 aa13.03□□□□□ -0.32
ZNF548-212ENST00000602086 CLN6Q9NWW5 311 aa13.03□□□□□ -0.32
ZNF548-212ENST00000602086 CHRNA9Q9UGM1 479 aa13.03□□□□□ -0.32
ZNF548-212ENST00000602086 HIF3AQ9Y2N7 669 aa13.03□□□□□ -0.32
ZNF548-212ENST00000602086 SPIN1Q9Y657 262 aaPredicted RBP13.03□□□□□ -0.32
ZNF548-212ENST00000602086 CELSR3Q9NYQ7 3312 aa13.03□□□□□ -0.32
ZNF548-212ENST00000602086 ACACAQ13085 2346 aa13.02□□□□□ -0.32
ZNF548-212ENST00000602086 TMEM72A0PK05 275 aa13.02□□□□□ -0.33
ZNF548-212ENST00000602086 C2orf72A6NCS6 295 aa13.02□□□□□ -0.33
ZNF548-212ENST00000602086 BHLHE40O14503 412 aa13.02□□□□□ -0.33
ZNF548-212ENST00000602086 IDH3BO43837 385 aa13.02□□□□□ -0.33
ZNF548-212ENST00000602086 CH25HO95992 272 aa13.02□□□□□ -0.33
ZNF548-212ENST00000602086 BGLAPP02818 100 aa13.02□□□□□ -0.33
ZNF548-212ENST00000602086 APEHP13798 732 aaKnown RBP13.02□□□□□ -0.33
ZNF548-212ENST00000602086 ZNF17P17021 662 aa13.02□□□□□ -0.33
ZNF548-212ENST00000602086 CD96P40200 585 aa13.02□□□□□ -0.33
ZNF548-212ENST00000602086 TUBA3CQ13748 450 aa13.02□□□□□ -0.33
ZNF548-212ENST00000602086 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.02□□□□□ -0.33
ZNF548-212ENST00000602086 FAM69AQ5T7M9 428 aa13.02□□□□□ -0.33
ZNF548-212ENST00000602086 PRAMEF20Q5VT98 475 aa13.02□□□□□ -0.33
ZNF548-212ENST00000602086 AGAP7PQ5VUJ5 663 aa13.02□□□□□ -0.33
ZNF548-212ENST00000602086 C1orf140Q5VVS0 124 aa13.02□□□□□ -0.33
ZNF548-212ENST00000602086 OR5M10Q6IEU7 315 aa13.02□□□□□ -0.33
ZNF548-212ENST00000602086 TUBA3EQ6PEY2 450 aa13.02□□□□□ -0.33
ZNF548-212ENST00000602086 ARSKQ6UWY0 536 aa13.02□□□□□ -0.33
ZNF548-212ENST00000602086 ISLR2Q6UXK2 745 aa13.02□□□□□ -0.33
ZNF548-212ENST00000602086 DPY19L2P2Q6ZN68 376 aa13.02□□□□□ -0.33
ZNF548-212ENST00000602086 MEX3DQ86XN8 651 aaKnown RBP13.02□□□□□ -0.33
ZNF548-212ENST00000602086 CCDC103Q8IW40 242 aa13.02□□□□□ -0.33
ZNF548-212ENST00000602086 GTPBP8Q8N3Z3 284 aaPredicted RBP13.02□□□□□ -0.33
ZNF548-212ENST00000602086 OR13C2Q8NGS9 318 aa13.02□□□□□ -0.33
ZNF548-212ENST00000602086 SNIP1Q8TAD8 396 aaKnown RBP13.02□□□□□ -0.33
ZNF548-212ENST00000602086 TMEM163Q8TC26 289 aa13.02□□□□□ -0.33
ZNF548-212ENST00000602086 SLC25A43Q8WUT9 341 aaPredicted RBP13.02□□□□□ -0.33
ZNF548-212ENST00000602086 DDIT4LQ96D03 193 aa13.02□□□□□ -0.33
ZNF548-212ENST00000602086 AGAP4Q96P64 663 aa13.02□□□□□ -0.33
ZNF548-212ENST00000602086 TNFRSF13CQ96RJ3 184 aa13.02□□□□□ -0.33
ZNF548-212ENST00000602086 ADNPQ9H2P0 1102 aa13.02□□□□□ -0.33
ZNF548-212ENST00000602086 MCCC2Q9HCC0 563 aa13.02□□□□□ -0.33
ZNF548-212ENST00000602086 NANSQ9NR45 359 aa13.02□□□□□ -0.33
ZNF548-212ENST00000602086 LRFN1Q9P244 771 aa13.02□□□□□ -0.33
ZNF548-212ENST00000602086 SSUH2Q9Y2M2 353 aa13.02□□□□□ -0.33
ZNF548-212ENST00000602086 SLC6A5Q9Y345 797 aa13.02□□□□□ -0.33
ZNF548-212ENST00000602086 HRH3Q9Y5N1 445 aa13.02□□□□□ -0.33
ZNF548-212ENST00000602086 APC2O95996 2303 aa13.01□□□□□ -0.33
ZNF548-212ENST00000602086 SNTNA6NMZ2 147 aa13.01□□□□□ -0.33
ZNF548-212ENST00000602086 M0R3G1 203 aa13.01□□□□□ -0.33
ZNF548-212ENST00000602086 GNB5O14775 395 aa13.01□□□□□ -0.33
ZNF548-212ENST00000602086 ARPC3O15145 178 aa13.01□□□□□ -0.33
ZNF548-212ENST00000602086 SURF4O15260 269 aa13.01□□□□□ -0.33
ZNF548-212ENST00000602086 NKX2-8O15522 239 aa13.01□□□□□ -0.33
ZNF548-212ENST00000602086 NEURL1O76050 574 aa13.01□□□□□ -0.33
ZNF548-212ENST00000602086 AHSA1O95433 338 aa13.01□□□□□ -0.33
ZNF548-212ENST00000602086 CLPTM1O96005 669 aa13.01□□□□□ -0.33
ZNF548-212ENST00000602086 UQCRC1P31930 480 aa13.01□□□□□ -0.33
ZNF548-212ENST00000602086 MASP1P48740 699 aa13.01□□□□□ -0.33
ZNF548-212ENST00000602086 SLC35A2P78381 396 aa13.01□□□□□ -0.33
ZNF548-212ENST00000602086 CDC20Q12834 499 aa13.01□□□□□ -0.33
ZNF548-212ENST00000602086 FOXF1Q12946 379 aa13.01□□□□□ -0.33
ZNF548-212ENST00000602086 SELENBP1Q13228 472 aa13.01□□□□□ -0.33
ZNF548-212ENST00000602086 MFAP5Q13361 173 aa13.01□□□□□ -0.33
ZNF548-212ENST00000602086 SNAPC1Q16533 368 aa13.01□□□□□ -0.33
ZNF548-212ENST00000602086 ZNF773Q6PK81 442 aa13.01□□□□□ -0.33
ZNF548-212ENST00000602086 MAMDC2Q7Z304 686 aaPredicted RBP13.01□□□□□ -0.33
ZNF548-212ENST00000602086 MDGA2Q7Z553 956 aa13.01□□□□□ -0.33
ZNF548-212ENST00000602086 ZNF248Q8NDW4 579 aa13.01□□□□□ -0.33
ZNF548-212ENST00000602086 OR4Q3Q8NH05 313 aa13.01□□□□□ -0.33
ZNF548-212ENST00000602086 MFSD8Q8NHS3 518 aa13.01□□□□□ -0.33
ZNF548-212ENST00000602086 POC1BQ8TC44 478 aa13.01□□□□□ -0.33
ZNF548-212ENST00000602086 HAS2Q92819 552 aa13.01□□□□□ -0.33
ZNF548-212ENST00000602086 UBE2FQ969M7 185 aa13.01□□□□□ -0.33
ZNF548-212ENST00000602086 TAAR8Q969N4 342 aa13.01□□□□□ -0.33
ZNF548-212ENST00000602086 KTI12Q96EK9 354 aaPredicted RBP13.01□□□□□ -0.33
ZNF548-212ENST00000602086 PTDSS2Q9BVG9 487 aa13.01□□□□□ -0.33
ZNF548-212ENST00000602086 RASSF1Q9NS23 344 aa13.01□□□□□ -0.33
ZNF548-212ENST00000602086 FKBP14Q9NWM8 211 aa13.01□□□□□ -0.33
ZNF548-212ENST00000602086 TVP23BQ9NYZ1 205 aa13.01□□□□□ -0.33
ZNF548-212ENST00000602086 CNOT2Q9NZN8 540 aaKnown RBP13.01□□□□□ -0.33
ZNF548-212ENST00000602086 DKK4Q9UBT3 224 aa13.01□□□□□ -0.33
ZNF548-212ENST00000602086 FBXL2Q9UKC9 423 aa13.01□□□□□ -0.33
ZNF548-212ENST00000602086 CORINQ9Y5Q5 1042 aa13.01□□□□□ -0.33
ZNF548-212ENST00000602086 MED13Q9UHV7 2174 aa13.01□□□□□ -0.33
ZNF548-212ENST00000602086 TRAV27A0A087WT01 109 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms