RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 TBPL2Q6SJ96 375 aa17.94■□□□□ 0.46
SHKBP1-222ENST00000600320 ZNF771Q7L3S4 317 aaPredicted RBP17.94■□□□□ 0.46
SHKBP1-222ENST00000600320 ADGRE4PQ86SQ3 457 aa17.94■□□□□ 0.46
SHKBP1-222ENST00000600320 OR2T29Q8NH02 315 aa17.94■□□□□ 0.46
SHKBP1-222ENST00000600320 SLC7A13Q8TCU3 470 aa17.94■□□□□ 0.46
SHKBP1-222ENST00000600320 ZPLD1Q8TCW7 415 aa17.94■□□□□ 0.46
SHKBP1-222ENST00000600320 TAAR8Q969N4 342 aa17.94■□□□□ 0.46
SHKBP1-222ENST00000600320 ANKRD19PQ9H560 264 aa17.94■□□□□ 0.46
SHKBP1-222ENST00000600320 ARMC1Q9NVT9 282 aa17.94■□□□□ 0.46
SHKBP1-222ENST00000600320 TRAV36DV7A0A075B6V5 113 aa17.93■□□□□ 0.46
SHKBP1-222ENST00000600320 TRGV8A0A0C4DH27 118 aa17.93■□□□□ 0.46
SHKBP1-222ENST00000600320 LIPT2A6NK58 231 aa17.93■□□□□ 0.46
SHKBP1-222ENST00000600320 FTCDNL1E5RQL4 147 aa17.93■□□□□ 0.46
SHKBP1-222ENST00000600320 LRRN3E7EW58 273 aa17.93■□□□□ 0.46
SHKBP1-222ENST00000600320 H3BNX3 289 aa17.93■□□□□ 0.46
SHKBP1-222ENST00000600320 SULT2B1O00204 365 aa17.93■□□□□ 0.46
SHKBP1-222ENST00000600320 WDR1O75083 606 aa17.93■□□□□ 0.46
SHKBP1-222ENST00000600320 PMS2P2O95744 297 aa17.93■□□□□ 0.46
SHKBP1-222ENST00000600320 CA7P43166 264 aa17.93■□□□□ 0.46
SHKBP1-222ENST00000600320 LIMS1P48059 325 aa17.93■□□□□ 0.46
SHKBP1-222ENST00000600320 CARD18P57730 90 aa17.93■□□□□ 0.46
SHKBP1-222ENST00000600320 OR2B6P58173 313 aa17.93■□□□□ 0.46
SHKBP1-222ENST00000600320 OR7A5Q15622 319 aa17.93■□□□□ 0.46
SHKBP1-222ENST00000600320 SGCBQ16585 318 aa17.93■□□□□ 0.46
SHKBP1-222ENST00000600320 EIF2S3LQ2VIR3 472 aaKnown RBP17.93■□□□□ 0.46
SHKBP1-222ENST00000600320 PDSS1Q5T2R2 415 aa17.93■□□□□ 0.46
SHKBP1-222ENST00000600320 C1orf185Q5T7R7 199 aa17.93■□□□□ 0.46
SHKBP1-222ENST00000600320 RPTNQ6XPR3 784 aa17.93■□□□□ 0.46
SHKBP1-222ENST00000600320 SEM1Q6ZVN7 128 aa17.93■□□□□ 0.46
SHKBP1-222ENST00000600320 ATCAYQ86WG3 371 aa17.93■□□□□ 0.46
SHKBP1-222ENST00000600320 OR4C15Q8NGM1 316 aa17.93■□□□□ 0.46
SHKBP1-222ENST00000600320 ACOT11Q8WXI4 607 aaPredicted RBP17.93■□□□□ 0.46
SHKBP1-222ENST00000600320 HS6ST2Q96MM7 605 aa17.93■□□□□ 0.46
SHKBP1-222ENST00000600320 TRIB1Q96RU8 372 aa17.93■□□□□ 0.46
SHKBP1-222ENST00000600320 TP63Q9H3D4 680 aaPredicted RBP17.93■□□□□ 0.46
SHKBP1-222ENST00000600320 C20orf141Q9NUB4 165 aa17.93■□□□□ 0.46
SHKBP1-222ENST00000600320 CLCF1Q9UBD9 225 aa17.93■□□□□ 0.46
SHKBP1-222ENST00000600320 AP4S1Q9Y587 144 aa17.93■□□□□ 0.46
SHKBP1-222ENST00000600320 LYVE1Q9Y5Y7 322 aa17.93■□□□□ 0.46
SHKBP1-222ENST00000600320 IGHV3-15A0A0B4J1V0 119 aa17.92■□□□□ 0.46
SHKBP1-222ENST00000600320 FIGNL2A6NMB9 653 aa17.92■□□□□ 0.46
SHKBP1-222ENST00000600320 TGM6O95932 706 aa17.92■□□□□ 0.46
SHKBP1-222ENST00000600320 CST1P01037 141 aa17.92■□□□□ 0.46
SHKBP1-222ENST00000600320 BGLAPP02818 100 aa17.92■□□□□ 0.46
SHKBP1-222ENST00000600320 STSP08842 583 aa17.92■□□□□ 0.46
SHKBP1-222ENST00000600320 GABRA1P14867 456 aa17.92■□□□□ 0.46
SHKBP1-222ENST00000600320 HOXB6P17509 224 aaKnown RBP17.92■□□□□ 0.46
SHKBP1-222ENST00000600320 FPR1P21462 350 aa17.92■□□□□ 0.46
SHKBP1-222ENST00000600320 CBLP22681 906 aa17.92■□□□□ 0.46
SHKBP1-222ENST00000600320 ACVR2AP27037 513 aa17.92■□□□□ 0.46
SHKBP1-222ENST00000600320 IST1P53990 364 aa17.92■□□□□ 0.46
SHKBP1-222ENST00000600320 EXOC3L2Q2M3D2 409 aa17.92■□□□□ 0.46
SHKBP1-222ENST00000600320 C5orf46Q6UWT4 87 aa17.92■□□□□ 0.46
SHKBP1-222ENST00000600320 NCCRP1Q6ZVX7 275 aaPredicted RBP17.92■□□□□ 0.46
SHKBP1-222ENST00000600320 CHMP1BQ7LBR1 199 aa17.92■□□□□ 0.46
SHKBP1-222ENST00000600320 MEX3DQ86XN8 651 aaKnown RBP17.92■□□□□ 0.46
SHKBP1-222ENST00000600320 ROBO4Q8WZ75 1007 aa17.92■□□□□ 0.46
SHKBP1-222ENST00000600320 MOGAT1Q96PD6 335 aa17.92■□□□□ 0.46
SHKBP1-222ENST00000600320 UCN2Q96RP3 112 aa17.92■□□□□ 0.46
SHKBP1-222ENST00000600320 EPYCQ99645 322 aa17.92■□□□□ 0.46
SHKBP1-222ENST00000600320 SLC19A3Q9BZV2 496 aa17.92■□□□□ 0.46
SHKBP1-222ENST00000600320 TRAPPC4Q9Y296 219 aa17.92■□□□□ 0.46
SHKBP1-222ENST00000600320 MED31Q9Y3C7 131 aa17.92■□□□□ 0.46
SHKBP1-222ENST00000600320 CFAP46Q8IYW2 2715 aa17.92■□□□□ 0.46
SHKBP1-222ENST00000600320 POLEQ07864 2286 aa17.91■□□□□ 0.46
SHKBP1-222ENST00000600320 SH3PXD2BA1X283 911 aa17.91■□□□□ 0.46
SHKBP1-222ENST00000600320 ENO4A6NNW6 628 aa17.91■□□□□ 0.46
SHKBP1-222ENST00000600320 ZNF814B7Z6K7 855 aa17.91■□□□□ 0.46
SHKBP1-222ENST00000600320 TNFRSF11BO00300 401 aa17.91■□□□□ 0.46
SHKBP1-222ENST00000600320 FZD7O75084 574 aa17.91■□□□□ 0.46
SHKBP1-222ENST00000600320 AQP8O94778 261 aa17.91■□□□□ 0.46
SHKBP1-222ENST00000600320 ENPP1P22413 925 aa17.91■□□□□ 0.46
SHKBP1-222ENST00000600320 HMGA2P52926 109 aa17.91■□□□□ 0.46
SHKBP1-222ENST00000600320 SMIM11AP58511 58 aa17.91■□□□□ 0.46
SHKBP1-222ENST00000600320 RAC3P60763 192 aa17.91■□□□□ 0.46
SHKBP1-222ENST00000600320 PON3Q15166 354 aa17.91■□□□□ 0.46
SHKBP1-222ENST00000600320 ZNF74Q16587 644 aa17.91■□□□□ 0.46
SHKBP1-222ENST00000600320 ZNF239Q16600 458 aaKnown RBP17.91■□□□□ 0.46
SHKBP1-222ENST00000600320 ZNF730Q6ZMV8 503 aa17.91■□□□□ 0.46
SHKBP1-222ENST00000600320 MBOAT2Q6ZWT7 520 aa17.91■□□□□ 0.46
SHKBP1-222ENST00000600320 SLC46A3Q7Z3Q1 461 aa17.91■□□□□ 0.46
SHKBP1-222ENST00000600320 NRMQ8IXM6 262 aa17.91■□□□□ 0.46
SHKBP1-222ENST00000600320 MARVELD2Q8N4S9 558 aa17.91■□□□□ 0.46
SHKBP1-222ENST00000600320 MFSD8Q8NHS3 518 aa17.91■□□□□ 0.46
SHKBP1-222ENST00000600320 FNDC9Q8TBE3 224 aa17.91■□□□□ 0.46
SHKBP1-222ENST00000600320 SLC25A36Q96CQ1 311 aa17.91■□□□□ 0.46
SHKBP1-222ENST00000600320 ALPK1Q96QP1 1244 aa17.91■□□□□ 0.46
SHKBP1-222ENST00000600320 YY1AP1Q9H869 796 aa17.91■□□□□ 0.46
SHKBP1-222ENST00000600320 REEP1Q9H902 201 aa17.91■□□□□ 0.46
SHKBP1-222ENST00000600320 SAMHD1Q9Y3Z3 626 aaKnown RBP17.91■□□□□ 0.46
SHKBP1-222ENST00000600320 U3KQV3 271 aa17.91■□□□□ 0.46
SHKBP1-222ENST00000600320 NBASA2RRP1 2371 aa17.91■□□□□ 0.46
SHKBP1-222ENST00000600320 CD8B2A6NJW9 211 aa17.9■□□□□ 0.46
SHKBP1-222ENST00000600320 SMAD9O15198 467 aaKnown RBP17.9■□□□□ 0.46
SHKBP1-222ENST00000600320 RAMP1O60894 148 aa17.9■□□□□ 0.46
SHKBP1-222ENST00000600320 CH25HO95992 272 aa17.9■□□□□ 0.46
SHKBP1-222ENST00000600320 IFI30P13284 250 aa17.9■□□□□ 0.46
SHKBP1-222ENST00000600320 PTGER4P35408 488 aa17.9■□□□□ 0.46
SHKBP1-222ENST00000600320 AGFG1P52594 562 aaKnown RBP17.9■□□□□ 0.46
SHKBP1-222ENST00000600320 CSNK2A1P68400 391 aaPredicted RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms