RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	UBQLNL	Q8IYU4	475 aa		19.75	■□□□□ 0.75
LTBP4-227	ENST00000600026	RNF113B	Q8IZP6	322 aa	Known RBP	19.75	■□□□□ 0.75
LTBP4-227	ENST00000600026	SVOPL	Q8N434	492 aa		19.75	■□□□□ 0.75
LTBP4-227	ENST00000600026	ICA1L	Q8NDH6	482 aa		19.75	■□□□□ 0.75
LTBP4-227	ENST00000600026	OR4C15	Q8NGM1	316 aa		19.75	■□□□□ 0.75
LTBP4-227	ENST00000600026	STK35	Q8TDR2	534 aa		19.75	■□□□□ 0.75
LTBP4-227	ENST00000600026	TMEM255B	Q8WV15	326 aa		19.75	■□□□□ 0.75
LTBP4-227	ENST00000600026	SDCCAG3	Q96C92	435 aa		19.75	■□□□□ 0.75
LTBP4-227	ENST00000600026	DDIT4L	Q96D03	193 aa		19.75	■□□□□ 0.75
LTBP4-227	ENST00000600026	NRBF2	Q96F24	287 aa		19.75	■□□□□ 0.75
LTBP4-227	ENST00000600026	TMEM185B	Q9H7F4	350 aa		19.75	■□□□□ 0.75
LTBP4-227	ENST00000600026	MED31	Q9Y3C7	131 aa		19.75	■□□□□ 0.75
LTBP4-227	ENST00000600026	ARHGAP21	Q5T5U3	1957 aa		19.75	■□□□□ 0.75
LTBP4-227	ENST00000600026		A0A087WUU8	490 aa		19.74	■□□□□ 0.75
LTBP4-227	ENST00000600026		A8MVM7	634 aa		19.74	■□□□□ 0.75
LTBP4-227	ENST00000600026	SEC14L5	O43304	696 aa		19.74	■□□□□ 0.75
LTBP4-227	ENST00000600026	EFNA2	O43921	213 aa		19.74	■□□□□ 0.75
LTBP4-227	ENST00000600026	TFPI	P10646	304 aa		19.74	■□□□□ 0.75
LTBP4-227	ENST00000600026	CPN1	P15169	458 aa		19.74	■□□□□ 0.75
LTBP4-227	ENST00000600026	LIMS1	P48059	325 aa		19.74	■□□□□ 0.75
LTBP4-227	ENST00000600026	CASP6	P55212	293 aa		19.74	■□□□□ 0.75
LTBP4-227	ENST00000600026	RAC1	P63000	192 aa		19.74	■□□□□ 0.75
LTBP4-227	ENST00000600026	SRY	Q05066	204 aa		19.74	■□□□□ 0.75
LTBP4-227	ENST00000600026	BCL2A1	Q16548	175 aa		19.74	■□□□□ 0.75
LTBP4-227	ENST00000600026	WDR88	Q6ZMY6	472 aa		19.74	■□□□□ 0.75
LTBP4-227	ENST00000600026	HIPK1	Q86Z02	1210 aa		19.74	■□□□□ 0.75
LTBP4-227	ENST00000600026	ATP6V1C2	Q8NEY4	427 aa		19.74	■□□□□ 0.75
LTBP4-227	ENST00000600026	GIPC3	Q8TF64	312 aa		19.74	■□□□□ 0.75
LTBP4-227	ENST00000600026	ZNF426	Q9BUY5	554 aa		19.74	■□□□□ 0.75
LTBP4-227	ENST00000600026	SLC19A3	Q9BZV2	496 aa		19.74	■□□□□ 0.75
LTBP4-227	ENST00000600026	KLHL4	Q9C0H6	718 aa		19.74	■□□□□ 0.75
LTBP4-227	ENST00000600026	TP63	Q9H3D4	680 aa	Predicted RBP	19.74	■□□□□ 0.75
LTBP4-227	ENST00000600026	SH3PXD2B	A1X283	911 aa		19.73	■□□□□ 0.75
LTBP4-227	ENST00000600026	FIGNL2	A6NMB9	653 aa		19.73	■□□□□ 0.75
LTBP4-227	ENST00000600026	GJE1	A6NN92	205 aa		19.73	■□□□□ 0.75
LTBP4-227	ENST00000600026	FUT4	P22083	530 aa		19.73	■□□□□ 0.75
LTBP4-227	ENST00000600026	IFNGR2	P38484	337 aa		19.73	■□□□□ 0.75
LTBP4-227	ENST00000600026	CLK1	P49759	484 aa	Known RBP	19.73	■□□□□ 0.75
LTBP4-227	ENST00000600026	IST1	P53990	364 aa		19.73	■□□□□ 0.75
LTBP4-227	ENST00000600026	UGT2B15	P54855	530 aa		19.73	■□□□□ 0.75
LTBP4-227	ENST00000600026	CLDN20	P56880	219 aa		19.73	■□□□□ 0.75
LTBP4-227	ENST00000600026	SLC34A1	Q06495	639 aa		19.73	■□□□□ 0.75
LTBP4-227	ENST00000600026	MICA	Q29983	383 aa		19.73	■□□□□ 0.75
LTBP4-227	ENST00000600026	SHQ1	Q6PI26	577 aa	Known RBP	19.73	■□□□□ 0.75
LTBP4-227	ENST00000600026	MBOAT2	Q6ZWT7	520 aa		19.73	■□□□□ 0.75
LTBP4-227	ENST00000600026	GGN	Q86UU5	652 aa		19.73	■□□□□ 0.75
LTBP4-227	ENST00000600026	LSR	Q86X29	649 aa	Predicted RBP	19.73	■□□□□ 0.75
LTBP4-227	ENST00000600026	ZDHHC13	Q8IUH4	622 aa		19.73	■□□□□ 0.75
LTBP4-227	ENST00000600026	CDK20	Q8IZL9	346 aa		19.73	■□□□□ 0.75
LTBP4-227	ENST00000600026	OR4K5	Q8NGD3	323 aa		19.73	■□□□□ 0.75
LTBP4-227	ENST00000600026	PIGX	Q8TBF5	258 aa		19.73	■□□□□ 0.75
LTBP4-227	ENST00000600026	FUZ	Q9BT04	418 aa		19.73	■□□□□ 0.75
LTBP4-227	ENST00000600026	ALKBH4	Q9NXW9	302 aa		19.73	■□□□□ 0.75
LTBP4-227	ENST00000600026	POLE	Q07864	2286 aa		19.73	■□□□□ 0.75
LTBP4-227	ENST00000600026	KIAA1549	Q9HCM3	1950 aa		19.72	■□□□□ 0.75
LTBP4-227	ENST00000600026	HTR3E	A5X5Y0	456 aa		19.72	■□□□□ 0.75
LTBP4-227	ENST00000600026	SAC3D1	A6NKF1	404 aa		19.72	■□□□□ 0.75
LTBP4-227	ENST00000600026		G3V2T6	193 aa		19.72	■□□□□ 0.75
LTBP4-227	ENST00000600026		H0YC42	278 aa		19.72	■□□□□ 0.75
LTBP4-227	ENST00000600026	OR10H3	O60404	316 aa		19.72	■□□□□ 0.75
LTBP4-227	ENST00000600026	WDR1	O75083	606 aa		19.72	■□□□□ 0.75
LTBP4-227	ENST00000600026	OPN1LW	P04000	364 aa		19.72	■□□□□ 0.75
LTBP4-227	ENST00000600026	SHC1	P29353	583 aa		19.72	■□□□□ 0.75
LTBP4-227	ENST00000600026	SUCLG1	P53597	346 aa	Known RBP	19.72	■□□□□ 0.75
LTBP4-227	ENST00000600026	TPD52	P55327	224 aa	Predicted RBP	19.72	■□□□□ 0.75
LTBP4-227	ENST00000600026	CLDN15	P56746	228 aa		19.72	■□□□□ 0.75
LTBP4-227	ENST00000600026	SEC23B	Q15437	767 aa		19.72	■□□□□ 0.75
LTBP4-227	ENST00000600026	TBPL2	Q6SJ96	375 aa		19.72	■□□□□ 0.75
LTBP4-227	ENST00000600026	C3P1	Q6ZMU1	363 aa		19.72	■□□□□ 0.75
LTBP4-227	ENST00000600026	TMEM179B	Q7Z7N9	219 aa		19.72	■□□□□ 0.75
LTBP4-227	ENST00000600026	MEIOB	Q8N635	442 aa		19.72	■□□□□ 0.75
LTBP4-227	ENST00000600026	PHF3	Q92576	2039 aa	Known RBP	19.72	■□□□□ 0.75
LTBP4-227	ENST00000600026	POTEKP	Q9BYX7	375 aa		19.72	■□□□□ 0.75
LTBP4-227	ENST00000600026	PDP1	Q9P0J1	537 aa	Predicted RBP	19.72	■□□□□ 0.75
LTBP4-227	ENST00000600026	NKX1-2	Q9UD57	310 aa	Predicted RBP	19.72	■□□□□ 0.75
LTBP4-227	ENST00000600026	TMEM5	Q9Y2B1	443 aa		19.72	■□□□□ 0.75
LTBP4-227	ENST00000600026	KPNA4	O00629	521 aa	Predicted RBP	19.71	■□□□□ 0.75
LTBP4-227	ENST00000600026	AHSA1	O95433	338 aa		19.71	■□□□□ 0.75
LTBP4-227	ENST00000600026	GABRA1	P14867	456 aa		19.71	■□□□□ 0.75
LTBP4-227	ENST00000600026	PTN	P21246	168 aa		19.71	■□□□□ 0.75
LTBP4-227	ENST00000600026	ACVR2A	P27037	513 aa		19.71	■□□□□ 0.75
LTBP4-227	ENST00000600026	SFTPD	P35247	375 aa		19.71	■□□□□ 0.75
LTBP4-227	ENST00000600026	SYT14P1	Q58G82	188 aa		19.71	■□□□□ 0.75
LTBP4-227	ENST00000600026	C1orf185	Q5T7R7	199 aa		19.71	■□□□□ 0.75
LTBP4-227	ENST00000600026	C1orf140	Q5VVS0	124 aa		19.71	■□□□□ 0.75
LTBP4-227	ENST00000600026	NRM	Q8IXM6	262 aa		19.71	■□□□□ 0.75
LTBP4-227	ENST00000600026	OR10G2	Q8NGC3	310 aa		19.71	■□□□□ 0.75
LTBP4-227	ENST00000600026	ADGRG7	Q96K78	797 aa		19.71	■□□□□ 0.75
LTBP4-227	ENST00000600026	KLHL15	Q96M94	604 aa		19.71	■□□□□ 0.75
LTBP4-227	ENST00000600026	TUBA1C	Q9BQE3	449 aa		19.71	■□□□□ 0.75
LTBP4-227	ENST00000600026	C9orf16	Q9BUW7	83 aa		19.71	■□□□□ 0.75
LTBP4-227	ENST00000600026	OAZ3	Q9UMX2	235 aa		19.71	■□□□□ 0.75
LTBP4-227	ENST00000600026	FAM215A	Q9Y5M1	114 aa		19.71	■□□□□ 0.75
LTBP4-227	ENST00000600026	IGKV1D-42	A0A075B6H8	117 aa		19.7	■□□□□ 0.74
LTBP4-227	ENST00000600026	TRAV36DV7	A0A075B6V5	113 aa		19.7	■□□□□ 0.74
LTBP4-227	ENST00000600026	ARRDC5	A6NEK1	342 aa		19.7	■□□□□ 0.74
LTBP4-227	ENST00000600026	AHRR	A9YTQ3	701 aa		19.7	■□□□□ 0.74
LTBP4-227	ENST00000600026	EIF1AY	O14602	144 aa	Known RBP	19.7	■□□□□ 0.74
LTBP4-227	ENST00000600026	IGF2	P01344	180 aa		19.7	■□□□□ 0.74
LTBP4-227	ENST00000600026	IFI30	P13284	250 aa		19.7	■□□□□ 0.74

Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms